Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold100G29576 Striga asiatica HOM05D007686 ORTHO05D009709 4.9e-38 163.3 81 100.0
Migut.K00622 Erythranthe guttata HOM05D007686 ORTHO05D009709 1.6e-28 131.7 80 81.2
Dinv14741 Davidia involucrata HOM05D007686 ORTHO05D009709 8.2e-25 119.4 81 65.4
HanXRQChr08g0208401 Helianthus annuus HOM05D007686 ORTHO05D009709 1.5e-23 115.2 77 67.5
Prupe.1G242700 Prunus persica HOM05D007686 ORTHO05D009709 2.6e-23 114.4 77 63.6
ECA233G6157 Erigeron canadensis HOM05D007686 ORTHO05D009709 3.4e-23 114.0 77 67.5
RcHm_v2.0_Chr4g0432731 Rosa chinensis HOM05D007686 ORTHO05D009709 1.3e-22 112.1 80 60.0
CiPaw.05G168000 Carya illinoinensis HOM05D007686 ORTHO05D009709 8.4e-22 109.4 81 61.7
Gohir.A04G137000 Gossypium hirsutum HOM05D007686 ORTHO05D009709 8.4e-22 109.4 81 58.0
Gohir.D04G180200 Gossypium hirsutum HOM05D007686 ORTHO05D009709 8.4e-22 109.4 81 59.3
Potri.008G185000 Populus trichocarpa HOM05D007686 ORTHO05D009709 1.4e-21 108.6 81 59.3
Sabra08G0140000 Salix brachista HOM05D007686 ORTHO05D009709 1.4e-21 108.6 81 59.3
MD13G1103100 Malus domestica HOM05D007686 ORTHO05D009709 1.9e-21 108.2 68 69.1
PGR119G1810 Punica granatum HOM05D007686 ORTHO05D009709 1.9e-21 108.2 81 59.3
FAN12G1967 Fragaria x ananassa HOM05D007686 ORTHO05D009709 3.2e-21 107.5 79 59.5
CANSAT01G2773 Cannabis sativa HOM05D007686 ORTHO05D009709 5.5e-21 106.7 78 62.8
Thecc.02G263700 Theobroma cacao HOM05D007686 ORTHO05D009709 1.2e-20 105.5 81 59.3
MSTRG.555 Avicennia marina HOM05D007686 ORTHO05D009709 2.1e-20 104.8 66 75.8
TWI18G1075 Tripterygium wilfordii HOM05D007686 ORTHO05D009709 2.1e-20 104.8 79 59.5
TWI36G0128 Tripterygium wilfordii HOM05D007686 ORTHO05D009709 6.1e-20 103.2 81 59.3
Lalb_Chr07g0185471 Lupinus albus HOM05D007686 ORTHO05D009709 7.9e-20 102.8 82 59.8
Ciclev10031251m.g Citrus clementina HOM05D007686 ORTHO05D009709 1.0e-19 102.4 80 56.2
arahy.Tifrunner.gnm1.ann1.BXJH78 Arachis hypogaea HOM05D007686 ORTHO05D009709 1.8e-19 101.7 82 56.1
Cpa.g.sc33.48 Carica papaya HOM05D007686 ORTHO05D009709 3.0e-19 100.9 81 58.0
Medtr8g089700 Medicago truncatula HOM05D007686 ORTHO05D009709 5.1e-19 100.1 82 56.1
Psat7g058760 Pisum sativum HOM05D007686 ORTHO05D009709 5.1e-19 100.1 82 58.5
MD16G1103300 Malus domestica HOM05D007686 ORTHO05D009709 2.5e-18 97.8 59 72.9
Solyc06g008190.1 Solanum lycopersicum HOM05D007686 ORTHO05D009709 2.5e-18 97.8 67 65.7
Sopen06g003050 Solanum pennellii HOM05D007686 ORTHO05D009709 2.5e-18 97.8 67 65.7
CSS0050065 Camellia sinensis var. sinensis HOM05D007686 ORTHO05D009709 4.3e-18 97.1 62 66.1
CDE05G1633 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 4.3e-18 97.1 73 61.6
Manes.13G022000 Manihot esculenta HOM05D007686 ORTHO05D009709 4.3e-18 97.1 81 55.6
TPR.G6255 Trifolium pratense HOM05D007686 ORTHO05D009709 5.7e-18 96.7 82 57.3
DCAR_031167 Daucus carota HOM05D002540 ORTHO05D002672 9.7e-18 95.9 67 65.7
Manes.13G021400 Manihot esculenta HOM05D007686 ORTHO05D009709 9.7e-18 95.9 81 55.6
Nitab4.5_0000067g0230 Nicotiana tabacum HOM05D007686 ORTHO05D009709 2.8e-17 94.4 63 65.1
Rhsim12G0039200 Rhododendron simsii HOM05D007686 ORTHO05D009709 8.2e-17 92.8 60 65.0
Glyma.08G131100 Glycine max HOM05D007686 ORTHO05D009709 1.4e-16 92.0 83 55.4
Nitab4.5_0001839g0010 Nicotiana tabacum HOM05D007686 ORTHO05D009709 1.4e-16 92.0 60 66.7
Glyma.05G173932 Glycine max HOM05D007686 ORTHO05D009709 1.8e-16 91.7 83 54.2
Lj4g0016926 Lotus japonicus HOM05D007686 ORTHO05D009709 2.4e-16 91.3 85 52.9
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 2.4e-16 91.3 69 59.4
Phvul.002G258900 Phaseolus vulgaris HOM05D007686 ORTHO05D009709 5.3e-16 90.1 83 54.2
CsaV3_5G030960 Cucumis sativus L. HOM05D007686 ORTHO05D009709 6.9e-16 89.7 77 55.8
Eucgr.H02473 Eucalyptus grandis HOM05D007686 ORTHO05D009709 6.9e-16 89.7 76 53.9
Gorai.012G173300 Gossypium raimondii HOM05D007686 ORTHO05D009709 9.0e-16 89.4 66 57.6
Ca_17785_v3 Cicer arietinum L. HOM05D007686 ORTHO05D009709 2.0e-15 88.2 82 52.4
Lj3P1060G37 Lonicera japonica HOM05D007686 ORTHO05D009709 2.6e-15 87.8 66 59.1
AUR62011787 Chenopodium quinoa HOM05D007686 ORTHO05D009709 5.9e-15 86.7 66 59.1
Hma1.2p1_0815F.1_g222720 Hydrangea macrophylla HOM05D007686 ORTHO05D009709 1.3e-14 85.5 59 62.7
Sed0013465 Sechium edule HOM05D007686 ORTHO05D009709 1.3e-14 85.5 77 53.2
GSVIVG01000559001 Vitis vinifera HOM05D007686 ORTHO05D009709 1.7e-14 85.1 59 59.3
ClCG05G025900 Citrullus lanatus HOM05D007686 ORTHO05D009709 2.9e-14 84.3 75 52.0
QL03p056833 Quercus lobata HOM05D007686 ORTHO05D009709 2.9e-14 84.3 54 68.5
QL93p1848_0021 Quercus lobata HOM05D007686 ORTHO05D009709 2.9e-14 84.3 54 68.5
Sc06g0009620 Simmondsia chinensis HOM05D007686 ORTHO05D009709 7.2e-13 79.7 56 60.7
SHI17831 Sapria himalayana HOM05D007686 ORTHO05D009709 1.2e-12 79.0 81 45.7
EL10Ac7g16785 Beta vulgaris HOM05D007686 ORTHO05D009709 1.6e-12 78.6 62 56.5
PSO724G0460 Papaver somniferum HOM05D007686 ORTHO05D009709 6.1e-12 76.6 59 57.6
PSO135G0590 Papaver somniferum HOM05D007686 ORTHO05D009709 1.8e-11 75.1 49 65.3
THA.LOC104805275 Tarenaya hassleriana HOM05D007686 ORTHO05D009709 5.1e-11 73.6 50 66.0
Zm00001eb331140 Zea mays HOM05D007686 ORTHO05D009709 8.8e-11 72.8 73 50.7
AT1G13040 Arabidopsis thaliana HOM05D007686 ORTHO05D009709 1.5e-10 72.0 53 60.4
AL1G24690 Arabidopsis lyrata HOM05D007686 ORTHO05D009709 2.0e-10 71.6 53 60.4
Carub.0001s1279 Capsella rubella HOM05D007686 ORTHO05D009709 2.5e-10 71.2 53 60.4
Os07g0688100 Oryza sativa ssp. japonica HOM05D007686 ORTHO05D009709 2.5e-10 71.2 73 49.3
Sp1g11590 Schrenkiella parvula HOM05D007686 ORTHO05D009709 3.3e-10 70.9 53 60.4
Atru.chr11.2166 Acer truncatum HOM05D007686 ORTHO05D009709 4.3e-10 70.5 53 56.6
Aqoxy2G03020 Aquilegia oxysepala HOM05D007686 ORTHO05D009709 4.3e-10 70.5 47 66.0
FvH4_4g25420 Fragaria vesca HOM05D007686 ORTHO05D009709 4.3e-10 70.5 44 65.9
COL.COLO4_23488 Corchorus olitorius HOM05D007686 ORTHO05D009709 9.7e-10 69.3 47 59.6
Lsat_1_v5_gn_8_152860 Lactuca sativa HOM05D007686 ORTHO05D009709 9.7e-10 69.3 47 66.0
Aa31LG1G1760 Aethionema arabicum HOM05D007686 ORTHO05D009709 1.3e-09 68.9 52 59.6
BcaC05g25091 Brassica carinata HOM05D007686 ORTHO05D009709 1.3e-09 68.9 51 60.8
A06p08670 Brassica napus HOM05D002540 ORTHO05D002672 1.3e-09 68.9 51 60.8
BolC5t29774H Brassica oleracea HOM05D007686 ORTHO05D009709 1.3e-09 68.9 51 60.8
BraA06t24064Z Brassica rapa HOM05D007686 ORTHO05D009709 1.3e-09 68.9 51 60.8
C05p10280 Brassica napus HOM05D002540 ORTHO05D002672 2.8e-09 67.8 51 58.8
CARHR013370 Cardamine hirsuta HOM05D007686 ORTHO05D009709 3.7e-09 67.4 51 60.8
C08p15790 Brassica napus HOM05D002540 ORTHO05D002672 4.8e-09 67.0 51 60.8
BolC8t49205H Brassica oleracea HOM05D002540 ORTHO05D002672 4.8e-09 67.0 51 60.8
TAR383G0079 Trochodendron aralioides HOM05D007686 ORTHO05D009709 6.3e-09 66.6 45 62.2
A08p32500 Brassica napus HOM05D007686 ORTHO05D009709 1.4e-08 65.5 51 60.8
BraA08t35174Z Brassica rapa HOM05D007686 ORTHO05D009709 1.4e-08 65.5 51 60.8
PGSC0003DMG400014696 Solanum tuberosum HOM05D007686 ORTHO05D009709 1.4e-08 65.5 47 61.7
Thhalv10007381m.g Eutrema salsugineum HOM05D007686 ORTHO05D009709 1.8e-08 65.1 51 56.9
CAN.G941.2 Capsicum annuum HOM05D007686 ORTHO05D009709 6.9e-08 63.2 165 29.1
Gohir.A03G132900 Gossypium hirsutum HOM05D007686 ORTHO05D009709 1.5e-07 62.0 47 57.4
Oeu049173.1 Olea europaea HOM05D007686 ORTHO05D009709 1.5e-07 62.0 43 65.1
HPP92_012781 Vanilla planifolia HOM05D007686 ORTHO05D009709 5.0e-06 57.0 40 57.5


User provided reference genes

Program Settings