Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold100G29569 Striga asiatica HOM05D005809 ORTHO05D007259 5.1e-54 214.2 109 100.0
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.1e-08 63.5 82 51.2
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 1.1e-08 63.5 81 51.9
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 2.5e-08 62.4 78 51.3
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 5.6e-08 61.2 89 42.7
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 5.6e-08 61.2 81 49.4
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 9.5e-08 60.5 74 52.7
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.6e-07 59.7 81 46.9
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 3.6e-07 58.5 81 46.9
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 8.0e-07 57.4 81 46.9
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 1.1e-06 57.0 81 48.1
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 1.1e-06 57.0 81 48.1
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 1.4e-06 56.6 81 45.7
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 1.8e-06 56.2 81 45.7
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 3.1e-06 55.5 81 44.4
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 3.1e-06 55.5 81 45.7
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 3.1e-06 55.5 81 45.7
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 3.1e-06 55.5 87 46.0
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 4.0e-06 55.1 81 44.4
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 4.0e-06 55.1 74 47.3
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 4.0e-06 55.1 79 45.6
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 4.0e-06 55.1 79 45.6
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 5.2e-06 54.7 81 44.4
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 5.2e-06 54.7 79 44.3
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 6.8e-06 54.3 81 43.2
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 8.9e-06 53.9 81 43.2
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 8.9e-06 53.9 81 43.2


User provided reference genes

Program Settings