Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 0.0e+00 1098.6 593 100.0
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 4.6e-165 585.5 560 59.3
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 2.2e-146 523.5 568 54.6
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 7.9e-141 505.0 578 51.9
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 1.9e-134 483.8 585 50.6
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 4.2e-134 482.6 554 51.1
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 1.5e-131 474.2 571 51.0
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 4.4e-131 472.6 557 51.0
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 4.8e-130 469.2 565 51.5
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 7.7e-128 461.8 577 48.5
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 1.7e-127 460.7 587 49.4
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 7.2e-126 455.3 562 47.9
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 1.6e-125 454.1 584 51.2
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 2.1e-125 453.8 564 47.7
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 3.6e-125 453.0 582 47.8
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 6.1e-125 452.2 573 48.2
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 1.8e-124 450.7 556 48.7
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 2.3e-124 450.3 566 47.7
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 6.7e-124 448.7 564 48.2
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 8.8e-124 448.4 566 47.5
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 2.0e-123 447.2 563 49.6
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 2.6e-123 446.8 566 48.6
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 5.7e-123 445.7 555 50.1
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 6.3e-122 442.2 556 48.4
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 1.3e-119 434.5 582 47.8
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 1.7e-119 434.1 562 47.7
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 2.2e-119 433.7 575 53.0
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 6.5e-119 432.2 558 52.2
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 5.5e-118 429.1 563 46.7
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 9.4e-118 428.3 583 46.7
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 9.4e-118 428.3 560 46.4
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 1.0e-116 424.9 562 49.1
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 2.3e-116 423.7 550 47.5
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 1.5e-115 421.0 568 46.8
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 2.0e-115 420.6 623 44.3
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 1.7e-114 417.5 581 45.3
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 1.7e-114 417.5 572 45.3
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 2.2e-114 417.2 572 44.6
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 2.8e-114 416.8 576 45.3
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 6.3e-114 415.6 564 45.6
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 1.1e-113 414.8 556 45.9
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 1.8e-113 414.1 593 44.0
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 3.1e-113 413.3 594 43.8
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.1e-113 412.9 566 46.1
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 4.1e-113 412.9 573 46.9
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 4.1e-113 412.9 573 46.9
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 9.1e-113 411.8 585 45.8
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 9.1e-113 411.8 593 43.7
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 1.2e-112 411.4 586 45.4
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 1.6e-112 411.0 571 50.8
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 2.0e-112 410.6 593 43.3
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 2.0e-112 410.6 581 44.6
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 3.5e-112 409.8 565 45.1
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 5.9e-112 409.1 581 44.4
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 7.7e-112 408.7 579 44.4
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 7.7e-112 408.7 579 44.0
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 7.7e-112 408.7 562 45.2
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 7.7e-112 408.7 572 44.9
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.0e-111 408.3 569 45.2
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 6.6e-111 405.6 582 44.2
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 6.6e-111 405.6 578 43.9
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 6.6e-111 405.6 582 44.2
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 8.6e-111 405.2 571 45.7
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 8.6e-111 405.2 567 45.0
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 8.6e-111 405.2 568 45.1
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 8.6e-111 405.2 569 46.0
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 1.5e-110 404.4 569 45.0
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 1.5e-110 404.4 571 51.0
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 4.2e-110 402.9 571 50.4
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 5.5e-110 402.5 564 48.4
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.1e-109 400.6 566 49.8
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 2.8e-109 400.2 557 45.2
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 6.1e-109 399.1 559 50.1
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 1.4e-108 397.9 565 44.4
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 1.2e-107 394.8 564 44.0
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 1.2e-107 394.8 569 44.3
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 5.7e-107 392.5 569 44.1
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 1.4e-105 387.9 551 49.5
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.0e-103 381.7 610 41.1
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 6.6e-103 379.0 569 41.8
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 7.5e-99 365.5 574 42.5
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 7.5e-99 365.5 567 43.4
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 1.4e-97 361.3 558 43.0
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 2.1e-93 347.4 481 46.4
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.2e-90 337.4 505 44.0
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 3.4e-75 287.0 572 35.3
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 1.5e-70 271.6 350 48.0
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 1.1e-68 265.4 339 49.3
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 1.4e-68 265.0 340 47.6
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 3.4e-67 260.4 340 47.1
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 3.4e-67 260.4 284 55.3
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 2.9e-66 257.3 403 41.4
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 1.3e-61 241.9 362 43.1
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.7e-58 231.5 356 45.5
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 7.1e-57 226.1 343 43.1
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 1.3e-42 178.7 601 29.8
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 1.9e-38 164.9 441 32.9
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 1.4e-31 142.1 163 48.5
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 9.1e-28 129.4 258 34.1
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 1.4e-25 122.1 152 44.7
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 3.6e-24 117.5 98 60.2
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 4.8e-21 107.1 222 35.1
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 4.8e-21 107.1 84 63.1
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 1.4e-20 105.5 234 34.6
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 2.2e-18 98.2 268 28.4
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 5.0e-18 97.1 191 35.1
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.1e-16 91.7 62 71.0
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 1.4e-15 89.0 87 54.0
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.3e-10 72.4 68 51.5


User provided reference genes

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