Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 9.1e-145 516.9 268 100.0
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 1.2e-80 303.9 160 97.5
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 1.5e-70 270.4 269 61.0
SGA_v2.0_scaffold66G22360 Striga asiatica HOM05D006326 ORTHO05D007589 3.1e-68 262.7 250 65.2
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 2.2e-66 256.5 277 56.7
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 3.8e-66 255.8 282 56.7
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 6.9e-60 235.0 298 54.0
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 1.7e-58 230.3 269 51.3
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 3.8e-58 229.2 265 55.1
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 9.1e-52 208.0 291 47.1
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 3.4e-51 206.1 291 47.1
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 3.2e-49 199.5 297 47.8
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 1.2e-48 197.6 337 42.4
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 3.9e-47 192.6 311 43.1
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 6.7e-47 191.8 331 42.9
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 2.4e-44 183.3 286 46.9
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 2.4e-44 183.3 315 44.1
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 3.1e-44 183.0 320 44.4
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.5e-43 180.6 275 44.7
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 2.0e-43 180.3 184 58.7
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 3.8e-42 176.0 320 44.4
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 2.7e-40 169.9 235 48.9
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 3.6e-40 169.5 324 42.9
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 4.7e-40 169.1 324 42.9
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 1.4e-39 167.5 266 46.2
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 5.2e-39 165.6 244 44.3
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 2.0e-38 163.7 118 70.3
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 2.6e-38 163.3 274 44.2
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 5.7e-38 162.2 291 39.9
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 5.7e-38 162.2 118 69.5
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 5.7e-38 162.2 118 69.5
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 1.3e-37 161.0 307 41.7
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 1.3e-37 161.0 235 47.7
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 1.7e-37 160.6 322 38.8
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 3.7e-37 159.5 245 43.3
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 3.7e-37 159.5 310 41.9
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 8.2e-37 158.3 306 41.8
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 1.4e-36 157.5 240 47.5
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 1.4e-36 157.5 242 47.1
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 3.1e-36 156.4 292 42.1
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 3.1e-36 156.4 313 41.2
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 3.1e-36 156.4 337 38.3
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 4.1e-36 156.0 251 45.8
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 4.1e-36 156.0 290 41.4
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 5.3e-36 155.6 235 45.1
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 7.0e-36 155.2 123 65.0
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 1.2e-35 154.5 255 42.4
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 2.6e-35 153.3 295 39.7
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 4.5e-35 152.5 285 44.6
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 4.5e-35 152.5 261 40.6
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 5.9e-35 152.1 249 44.2
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 1.3e-34 151.0 261 43.3
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 1.3e-34 151.0 297 40.4
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 2.9e-34 149.8 219 43.8
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 3.8e-34 149.4 239 46.4
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 5.0e-34 149.1 257 45.1
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 5.0e-34 149.1 238 46.6
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 8.5e-34 148.3 331 40.2
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 1.1e-33 147.9 201 49.3
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 1.5e-33 147.5 216 48.1
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 1.9e-33 147.1 299 39.1
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.9e-33 147.1 252 42.1
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 3.2e-33 146.4 309 38.8
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 7.2e-33 145.2 242 43.4
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 7.2e-33 145.2 280 40.4
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 9.4e-33 144.8 302 39.1
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 9.4e-33 144.8 254 44.5
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 9.4e-33 144.8 304 41.1
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 9.4e-33 144.8 251 41.4
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 1.6e-32 144.1 115 66.1
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 6.1e-32 142.1 270 41.1
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 6.1e-32 142.1 109 69.7
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.4e-31 141.0 271 43.2
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 8.8e-31 138.3 279 40.5
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 4.4e-30 136.0 189 46.6
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 6.3e-29 132.1 172 48.3
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 8.3e-29 131.7 177 49.7
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 1.1e-28 131.3 253 37.9
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 1.8e-28 130.6 279 36.6
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 3.1e-28 129.8 161 50.9
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 1.2e-27 127.9 317 37.2
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 5.9e-27 125.6 272 37.9
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 1.1e-25 121.3 257 38.1
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.5e-25 120.9 203 43.3
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 9.4e-25 118.2 242 36.0
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 3.6e-24 116.3 212 40.6
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.4e-23 114.4 237 40.5
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 3.0e-23 113.2 247 36.8
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 4.0e-23 112.8 252 37.7
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 2.0e-22 110.5 248 40.3
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 3.4e-22 109.8 216 40.3
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 1.3e-21 107.8 170 45.3
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 3.7e-21 106.3 258 36.0
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 3.7e-21 106.3 258 36.0
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 4.8e-21 105.9 216 40.7
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 6.3e-21 105.5 233 38.2
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 8.3e-21 105.1 315 31.4
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 8.3e-21 105.1 252 37.3
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 1.4e-20 104.4 267 34.1
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 5.4e-20 102.4 276 36.6
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 9.1e-20 101.7 254 36.6
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 1.7e-18 97.4 286 36.4
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.3e-18 97.1 81 65.4
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 2.3e-18 97.1 148 42.6
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 2.9e-18 96.7 310 32.6
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 3.8e-18 96.3 273 36.3
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 2.5e-17 93.6 175 39.4
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 3.3e-17 93.2 252 32.5
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 7.2e-17 92.0 258 31.4
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.6e-16 90.9 163 36.8
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 2.1e-16 90.5 146 42.5
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 3.6e-16 89.7 112 45.5
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 1.5e-14 84.3 74 62.2
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 1.2e-11 74.7 203 36.0
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 3.5e-11 73.2 63 58.7
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 6.1e-08 62.4 223 31.8
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 1.2e-06 58.2 107 36.4


User provided reference genes

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