Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41594 Sequoiadendron giganteum HOM05D007021 ORTHO05D008916 2.5e-99 365.5 198 100.0
VMungo0251G3404 Vigna mungo HOM05D007021 ORTHO05D008916 6.7e-44 181.4 123 77.2
Glyma.08G055300 Glycine max HOM05D007021 ORTHO05D008916 2.5e-43 179.5 168 62.5
Glyma.05G246900 Glycine max HOM05D007021 ORTHO05D008916 2.2e-42 176.4 169 62.1
Manes.06G004800 Manihot esculenta HOM05D007021 ORTHO05D008916 2.2e-42 176.4 146 69.2
ATR1096G089 Amborella trichopoda HOM05D007021 ORTHO05D008916 2.8e-42 176.0 118 81.4
Gohir.A09G174900 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.8e-42 176.0 136 73.5
Gohir.D09G170185 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.8e-42 176.0 136 73.5
Gorai.006G191500 Gossypium raimondii HOM05D007021 ORTHO05D008916 2.8e-42 176.0 136 73.5
Pp3c5_23310 Physcomitrium patens HOM05D007021 ORTHO05D008916 2.8e-42 176.0 183 56.8
Potri.015G036500 Populus trichocarpa HOM05D007021 ORTHO05D008916 4.8e-42 175.3 130 72.3
Cfa019639 Carpinus fangiana HOM05D007021 ORTHO05D008916 8.2e-42 174.5 123 76.4
Phvul.002G331000 Phaseolus vulgaris HOM05D007021 ORTHO05D008916 1.1e-41 174.1 123 72.4
GSVIVG01008459001 Vitis vinifera HOM05D007021 ORTHO05D008916 1.1e-41 174.1 145 66.2
CiPaw.16G096000 Carya illinoinensis HOM05D007021 ORTHO05D008916 1.4e-41 173.7 150 68.0
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 1.4e-41 173.7 106 84.0
HPP92_019433 Vanilla planifolia HOM05D007021 ORTHO05D008916 1.4e-41 173.7 122 77.0
Dinv18013 Davidia involucrata HOM05D007021 ORTHO05D008916 1.8e-41 173.3 131 71.8
QL10p030610 Quercus lobata HOM05D007021 ORTHO05D008916 1.8e-41 173.3 145 67.6
Hma1.2p1_0163F.1_g073000 Hydrangea macrophylla HOM05D007021 ORTHO05D008916 2.4e-41 172.9 122 73.8
PGR044G2095 Punica granatum HOM05D007021 ORTHO05D008916 2.4e-41 172.9 130 71.5
AagrBONN_evm.TU.Sc2ySwM_117.710 Anthoceros agrestis HOM05D007021 ORTHO05D008916 3.1e-41 172.6 123 67.5
AagrBONN_evm.TU.Sc2ySwM_340.579 Anthoceros agrestis HOM05D007021 ORTHO05D008916 3.1e-41 172.6 123 67.5
Solyc05g006440.4 Solanum lycopersicum HOM05D007021 ORTHO05D008916 3.1e-41 172.6 110 81.8
TAR623G0728 Trochodendron aralioides HOM05D007021 ORTHO05D008916 3.1e-41 172.6 122 76.2
CSS0017706 Camellia sinensis var. sinensis HOM05D007021 ORTHO05D008916 4.1e-41 172.2 124 76.6
Os01g0805200 Oryza sativa ssp. japonica HOM05D007021 ORTHO05D008916 4.1e-41 172.2 185 55.7
Aqoxy1G00082 Aquilegia oxysepala HOM05D007021 ORTHO05D008916 5.3e-41 171.8 163 62.0
Sabra15G0029900 Salix brachista HOM05D007021 ORTHO05D008916 5.3e-41 171.8 131 74.0
Cpa.g.sc3.381 Carica papaya HOM05D007021 ORTHO05D008916 6.9e-41 171.4 128 72.7
Psat7g001280 Pisum sativum HOM05D007021 ORTHO05D008916 9.1e-41 171.0 113 77.9
Sopen05g002370 Solanum pennellii HOM05D007021 ORTHO05D008916 9.1e-41 171.0 110 80.9
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 1.2e-40 170.6 112 78.6
Nitab4.5_0002312g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.2e-40 170.6 143 65.7
Prupe.5G234700 Prunus persica HOM05D007021 ORTHO05D008916 1.2e-40 170.6 131 69.5
Rhsim12G0138000 Rhododendron simsii HOM05D007021 ORTHO05D008916 1.2e-40 170.6 112 81.2
Atru.chr9.1670 Acer truncatum HOM05D007021 ORTHO05D008916 1.5e-40 170.2 171 57.9
arahy.Tifrunner.gnm1.ann1.I2I16V Arachis hypogaea HOM05D007021 ORTHO05D008916 2.0e-40 169.9 184 56.5
CAN.G159.4 Capsicum annuum HOM05D007021 ORTHO05D008916 2.0e-40 169.9 107 83.2
CANSAT80G0297 Cannabis sativa HOM05D007021 ORTHO05D008916 2.6e-40 169.5 128 71.9
CANSAT80G1746 Cannabis sativa HOM05D007021 ORTHO05D008916 2.6e-40 169.5 128 71.9
Lj4g0002555 Lotus japonicus HOM05D007021 ORTHO05D008916 2.6e-40 169.5 114 77.2
MD06G1228200 Malus domestica HOM05D007021 ORTHO05D008916 2.6e-40 169.5 119 73.9
Nitab4.5_0004119g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 2.6e-40 169.5 143 65.0
PGSC0003DMG400022612 Solanum tuberosum HOM05D007021 ORTHO05D008916 2.6e-40 169.5 107 83.2
Gohir.D08G085600 Gossypium hirsutum HOM05D007021 ORTHO05D008916 3.4e-40 169.1 136 70.6
Gorai.003G035100 Gossypium raimondii HOM05D007021 ORTHO05D008916 4.5e-40 168.7 136 71.3
Lalb_Chr05g0221591 Lupinus albus HOM05D007021 ORTHO05D008916 4.5e-40 168.7 166 60.8
COL.COLO4_28897 Corchorus olitorius HOM05D007021 ORTHO05D008916 5.9e-40 168.3 115 80.9
TPR.G1394 Trifolium pratense HOM05D007021 ORTHO05D008916 5.9e-40 168.3 143 65.0
MELO3C017374.2 Cucumis melo HOM05D007021 ORTHO05D008916 7.7e-40 167.9 127 70.1
SMO353G0175 Selaginella moellendorffii HOM05D007021 ORTHO05D008916 7.7e-40 167.9 112 75.0
MSTRG.11303 Avicennia marina HOM05D007021 ORTHO05D008916 1.0e-39 167.5 122 74.6
Ciclev10009503m.g Citrus clementina HOM05D007021 ORTHO05D008916 1.0e-39 167.5 125 68.8
Migut.I00268 Erythranthe guttata HOM05D007021 ORTHO05D008916 1.0e-39 167.5 148 63.5
Thecc.03G058600 Theobroma cacao HOM05D007021 ORTHO05D008916 1.0e-39 167.5 135 69.6
TWI81G0868 Tripterygium wilfordii HOM05D007021 ORTHO05D008916 1.0e-39 167.5 149 65.8
Gorai.004G090100 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.3e-39 167.2 114 78.1
Nn7g37125 Nelumbo nucifera HOM05D007021 ORTHO05D008916 1.3e-39 167.2 180 58.3
Hund08707 Selenicereus undatus HOM05D007021 ORTHO05D008916 1.3e-39 167.2 119 73.9
unitig_899.g15339 Utricularia gibba HOM05D007021 ORTHO05D008916 1.3e-39 167.2 106 83.0
Cc04_g06110 Coffea canephora HOM05D007021 ORTHO05D008916 1.7e-39 166.8 107 81.3
FAN04G2374 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.7e-39 166.8 122 71.3
Gohir.D03G033500 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.7e-39 166.8 136 69.9
RcHm_v2.0_Chr7g0178211 Rosa chinensis HOM05D007021 ORTHO05D008916 1.7e-39 166.8 127 70.1
CsaV3_1G004470 Cucumis sativus L. HOM05D007021 ORTHO05D008916 2.2e-39 166.4 108 79.6
FAN08G1321 Fragaria x ananassa HOM05D007021 ORTHO05D008916 2.2e-39 166.4 122 71.3
arahy.Tifrunner.gnm1.ann1.2FQ1SS Arachis hypogaea HOM05D007021 ORTHO05D008916 2.9e-39 166.0 139 69.1
Eucgr.K02276 Eucalyptus grandis HOM05D007021 ORTHO05D008916 3.8e-39 165.6 194 56.7
HanXRQChr15g0486591 Helianthus annuus HOM05D007021 ORTHO05D008916 3.8e-39 165.6 189 55.6
Lj9A418T22 Lonicera japonica HOM05D007021 ORTHO05D008916 3.8e-39 165.6 109 78.9
CARHR093260 Cardamine hirsuta HOM05D007021 ORTHO05D008916 5.0e-39 165.2 168 56.5
FvH4_5g17480 Fragaria vesca HOM05D007021 ORTHO05D008916 6.5e-39 164.9 146 62.3
FAN18G1853 Fragaria x ananassa HOM05D007021 ORTHO05D008916 6.5e-39 164.9 146 62.3
ClCG06G014200 Citrullus lanatus HOM05D007021 ORTHO05D008916 8.5e-39 164.5 107 79.4
Sc04g0004860 Simmondsia chinensis HOM05D007021 ORTHO05D008916 8.5e-39 164.5 124 70.2
Zm00001eb150510 Zea mays HOM05D007021 ORTHO05D008916 8.5e-39 164.5 189 54.0
Lsat_1_v5_gn_8_115881 Lactuca sativa HOM05D007021 ORTHO05D008916 1.1e-38 164.1 122 73.8
Medtr8g107430 Medicago truncatula HOM05D007021 ORTHO05D008916 1.1e-38 164.1 107 80.4
Oeu046158.1 Olea europaea HOM05D007021 ORTHO05D008916 1.4e-38 163.7 106 81.1
Aa31LG8G4800 Aethionema arabicum HOM05D007021 ORTHO05D008916 1.9e-38 163.3 118 68.6
FAN13G1201 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.9e-38 163.3 122 70.5
Sed0001257 Sechium edule HOM05D007021 ORTHO05D008916 1.9e-38 163.3 123 70.7
Haze_18883 Corylus avellana HOM05D007021 ORTHO05D008916 2.5e-38 162.9 128 71.1
Mapoly0023s0040 Marchantia polymorpha HOM05D007021 ORTHO05D008916 2.5e-38 162.9 205 53.2
PSO339G6055 Papaver somniferum HOM05D007021 ORTHO05D008916 4.2e-38 162.2 193 54.9
THA.LOC104821829 Tarenaya hassleriana HOM05D007021 ORTHO05D008916 5.5e-38 161.8 122 68.0
ECA232G1431 Erigeron canadensis HOM05D000006 ORTHO05D000091 9.4e-38 161.0 106 78.3
BcaB06g25855 Brassica carinata HOM05D007021 ORTHO05D008916 1.2e-37 160.6 122 68.0
Sp3g16050 Schrenkiella parvula HOM05D007021 ORTHO05D008916 1.2e-37 160.6 145 60.0
BcaC05g28735 Brassica carinata HOM05D007021 ORTHO05D008916 2.1e-37 159.8 109 72.5
A05p31870 Brassica napus HOM05D007021 ORTHO05D008916 2.1e-37 159.8 109 72.5
C05p48360 Brassica napus HOM05D007021 ORTHO05D008916 2.1e-37 159.8 109 72.5
BolC5t33573H Brassica oleracea HOM05D007021 ORTHO05D008916 2.1e-37 159.8 109 72.5
BraA05t22019Z Brassica rapa HOM05D007021 ORTHO05D008916 2.1e-37 159.8 109 72.5
Thhalv10021570m.g Eutrema salsugineum HOM05D007021 ORTHO05D008916 2.1e-37 159.8 125 66.4
PSO384G2008 Papaver somniferum HOM05D007021 ORTHO05D008916 2.7e-37 159.5 118 72.9
Carub.0003s1766 Capsella rubella HOM05D007021 ORTHO05D008916 3.6e-37 159.1 107 73.8
CDE04G1339 Ceratophyllum demersum HOM05D000015 ORTHO05D002445 3.6e-37 159.1 108 75.9
AL3G31100 Arabidopsis lyrata HOM05D007021 ORTHO05D008916 4.7e-37 158.7 108 72.2
AT3G17930 Arabidopsis thaliana HOM05D007021 ORTHO05D008916 4.7e-37 158.7 108 72.2
EL10Ac8g19152 Beta vulgaris HOM05D007021 ORTHO05D008916 2.0e-35 153.3 169 56.8
CDE07G1635 Ceratophyllum demersum HOM05D007021 ORTHO05D008916 4.8e-34 148.7 95 76.8
CBR_g48186 Chara braunii HOM05D007021 ORTHO05D008916 1.6e-32 143.7 120 61.7
Gohir.1Z049463 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.5e-30 136.3 136 64.0
Peaxi162Scf00828g00016 Petunia axillaris HOM05D007021 ORTHO05D008916 1.1e-25 120.9 78 82.1
DCAR_014390 Daucus carota HOM05D007021 ORTHO05D008916 1.4e-25 120.6 81 79.0
Cre01.g000850 Chlamydomonas reinhardtii HOM05D007021 ORTHO05D008916 5.3e-25 118.6 175 41.7
Duzib068G0088 Durio zibethinus HOM05D007021 ORTHO05D008916 9.1e-25 117.9 78 80.8
AUR62025165 Chenopodium quinoa HOM05D007021 ORTHO05D008916 7.7e-24 114.8 83 71.1
AUR62029014 Chenopodium quinoa HOM05D007021 ORTHO05D008916 7.7e-24 114.8 83 71.1
MCO16G182 Micromonas commoda HOM05D007021 ORTHO05D008916 1.1e-17 94.4 152 42.1
Oeu010907.1 Olea europaea HOM05D007021 ORTHO05D008916 9.1e-17 91.3 53 84.9
PRCOL_00000692 Prasinoderma coloniale HOM05D007021 ORTHO05D008916 2.7e-16 89.7 106 45.3
MD14G1237400 Malus domestica HOM05D007021 ORTHO05D008916 4.5e-16 89.0 80 63.8


User provided reference genes

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