Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41562 Sequoiadendron giganteum HOM05D004183 ORTHO05D005022 4.2e-104 381.3 190 100.0
ATR0810G041 Amborella trichopoda HOM05D004183 ORTHO05D005022 3.5e-50 202.2 158 63.3
Nn5g26963 Nelumbo nucifera HOM05D004183 ORTHO05D005022 4.9e-44 181.8 137 61.3
CDE11G0898 Ceratophyllum demersum HOM05D004183 ORTHO05D005022 1.6e-42 176.8 137 59.1
Actinidia11211 Actinidia chinensis HOM05D004183 ORTHO05D005022 6.0e-42 174.9 137 58.4
AagrBONN_evm.TU.Sc2ySwM_344.1225 Anthoceros agrestis HOM05D004183 ORTHO05D005022 1.3e-41 173.7 137 61.3
Aqoxy7G00086 Aquilegia oxysepala HOM05D004183 ORTHO05D005022 1.8e-41 173.3 137 59.9
CSS0046717 Camellia sinensis var. sinensis HOM05D004183 ORTHO05D005022 3.0e-41 172.6 137 59.1
HanXRQChr15g0484541 Helianthus annuus HOM05D004183 ORTHO05D005022 3.0e-41 172.6 137 54.7
Sed0016560 Sechium edule HOM05D004183 ORTHO05D005022 3.0e-41 172.6 137 59.9
Zm00001eb096590 Zea mays HOM05D004183 ORTHO05D005022 3.0e-41 172.6 137 59.1
MD10G1031900 Malus domestica HOM05D004183 ORTHO05D005022 3.9e-41 172.2 137 57.7
Migut.N00455 Erythranthe guttata HOM05D004183 ORTHO05D005022 5.1e-41 171.8 137 53.3
Phvul.009G192300 Phaseolus vulgaris HOM05D004183 ORTHO05D005022 6.7e-41 171.4 137 58.4
ClCG06G014020 Citrullus lanatus HOM05D004183 ORTHO05D005022 8.7e-41 171.0 137 57.7
ECA246G4622 Erigeron canadensis HOM05D004183 ORTHO05D005022 8.7e-41 171.0 137 56.9
MELO3C019211.2 Cucumis melo HOM05D004183 ORTHO05D005022 1.1e-40 170.6 137 57.7
Lj1g0005856 Lotus japonicus HOM05D004183 ORTHO05D005022 1.5e-40 170.2 137 55.5
CsaV3_2G035420 Cucumis sativus L. HOM05D004183 ORTHO05D005022 2.5e-40 169.5 137 57.7
Ah.09g232030 Amaranthus hybridus HOM05D004183 ORTHO05D005022 3.3e-40 169.1 137 56.9
Prupe.2G030300 Prunus persica HOM05D004183 ORTHO05D005022 3.3e-40 169.1 137 56.2
COL.COLO4_19761 Corchorus olitorius HOM05D004183 ORTHO05D005022 4.3e-40 168.7 137 56.2
Mapoly0026s0116 Marchantia polymorpha HOM05D004183 ORTHO05D005022 4.3e-40 168.7 145 57.9
Sc24g0002700 Simmondsia chinensis HOM05D004183 ORTHO05D005022 4.3e-40 168.7 137 56.2
GSVIVG01000237001 Vitis vinifera HOM05D004183 ORTHO05D005022 4.3e-40 168.7 137 56.2
Os07g0455100 Oryza sativa ssp. japonica HOM05D004183 ORTHO05D005022 5.6e-40 168.3 137 59.1
Duzib106G0093 Durio zibethinus HOM05D004183 ORTHO05D005022 7.4e-40 167.9 137 55.5
Sopen07g004700 Solanum pennellii HOM05D004183 ORTHO05D005022 7.4e-40 167.9 137 56.9
Nitab4.5_0010834g0010 Nicotiana tabacum HOM05D004183 ORTHO05D005022 9.6e-40 167.5 137 56.9
Solyc07g008760.4 Solanum lycopersicum HOM05D004183 ORTHO05D005022 9.6e-40 167.5 137 56.2
CAN.G333.6 Capsicum annuum HOM05D004183 ORTHO05D005022 1.3e-39 167.2 137 54.7
Dinv04533 Davidia involucrata HOM05D004183 ORTHO05D005022 1.3e-39 167.2 137 57.7
Duzib268G1261 Durio zibethinus HOM05D004183 ORTHO05D005022 1.3e-39 167.2 137 56.2
MSTRG.24596 Avicennia marina HOM05D004183 ORTHO05D005022 1.6e-39 166.8 169 47.9
Lsat_1_v5_gn_3_54960 Lactuca sativa HOM05D004183 ORTHO05D005022 1.6e-39 166.8 139 55.4
arahy.Tifrunner.gnm1.ann1.RUK03S Arachis hypogaea HOM05D004183 ORTHO05D005022 2.1e-39 166.4 137 54.7
Eucgr.H05055 Eucalyptus grandis HOM05D004183 ORTHO05D005022 2.1e-39 166.4 137 58.4
Thhalv10012633m.g Eutrema salsugineum HOM05D004183 ORTHO05D005022 2.1e-39 166.4 137 56.9
SGA_v2.0_scaffold7G03721 Striga asiatica HOM05D004183 ORTHO05D005022 2.1e-39 166.4 137 54.0
Psat5g056520 Pisum sativum HOM05D004183 ORTHO05D005022 2.8e-39 166.0 137 55.5
Atru.chr3.3380 Acer truncatum HOM05D004183 ORTHO05D005022 3.7e-39 165.6 137 55.5
Haze_19348 Corylus avellana HOM05D004183 ORTHO05D005022 3.7e-39 165.6 137 56.2
Glyma.04G204500 Glycine max HOM05D004183 ORTHO05D005022 3.7e-39 165.6 137 54.7
PSO063G6994 Papaver somniferum HOM05D004183 ORTHO05D005022 3.7e-39 165.6 137 56.9
PGR102G1375 Punica granatum HOM05D004183 ORTHO05D005022 3.7e-39 165.6 137 56.2
THA.LOC104827224 Tarenaya hassleriana HOM05D004183 ORTHO05D005022 3.7e-39 165.6 137 57.7
CiPaw.15G184500 Carya illinoinensis HOM05D004183 ORTHO05D005022 6.2e-39 164.9 137 56.2
Thecc.07G183400 Theobroma cacao HOM05D004183 ORTHO05D005022 6.2e-39 164.9 137 55.5
TPR.G7801 Trifolium pratense HOM05D004183 ORTHO05D005022 6.2e-39 164.9 137 55.5
unitig_8.g5004 Utricularia gibba HOM05D004183 ORTHO05D005022 6.2e-39 164.9 137 54.7
arahy.Tifrunner.gnm1.ann1.4S33SI Arachis hypogaea HOM05D004183 ORTHO05D005022 8.1e-39 164.5 137 54.0
Ca_17037_v3 Cicer arietinum L. HOM05D004183 ORTHO05D005022 8.1e-39 164.5 137 54.0
Potri.004G080800 Populus trichocarpa HOM05D004183 ORTHO05D005022 8.1e-39 164.5 137 54.7
AT5G17270 Arabidopsis thaliana HOM05D004183 ORTHO05D005022 1.1e-38 164.1 137 56.2
Gohir.A01G099200 Gossypium hirsutum HOM05D004183 ORTHO05D005022 1.1e-38 164.1 137 54.0
Gorai.002G109500 Gossypium raimondii HOM05D004183 ORTHO05D005022 1.1e-38 164.1 137 54.0
DCAR_009033 Daucus carota HOM05D004183 ORTHO05D005022 1.4e-38 163.7 137 53.3
PSO782G1025 Papaver somniferum HOM05D004183 ORTHO05D005022 1.4e-38 163.7 137 56.2
Sp6g26960 Schrenkiella parvula HOM05D004183 ORTHO05D005022 1.4e-38 163.7 137 55.5
AL6G28330 Arabidopsis lyrata HOM05D004183 ORTHO05D005022 1.8e-38 163.3 137 56.2
BcaB08g36793 Brassica carinata HOM05D004183 ORTHO05D005022 1.8e-38 163.3 137 55.5
Nitab4.5_0000617g0040 Nicotiana tabacum HOM05D004183 ORTHO05D005022 1.8e-38 163.3 135 57.8
Peaxi162Scf01600g00023 Petunia axillaris HOM05D004183 ORTHO05D005022 2.4e-38 162.9 135 57.0
CARHR195930 Cardamine hirsuta HOM05D004183 ORTHO05D005022 3.1e-38 162.5 137 55.5
Aa31LG11G12400 Aethionema arabicum HOM05D004183 ORTHO05D005022 4.0e-38 162.2 148 54.1
A03p08250 Brassica napus HOM05D004183 ORTHO05D005022 4.0e-38 162.2 137 54.7
Carub.0006s1546 Capsella rubella HOM05D004183 ORTHO05D005022 4.0e-38 162.2 137 55.5
Lalb_Chr08g0237701 Lupinus albus HOM05D004183 ORTHO05D005022 5.3e-38 161.8 137 53.3
EL10Ac8g19353 Beta vulgaris HOM05D004183 ORTHO05D005022 6.9e-38 161.4 137 55.5
Rhsim03G0265100 Rhododendron simsii HOM05D004183 ORTHO05D005022 6.9e-38 161.4 137 55.5
BolC3t13450H Brassica oleracea HOM05D004183 ORTHO05D005022 9.0e-38 161.0 137 54.7
RcHm_v2.0_Chr1g0321111 Rosa chinensis HOM05D004183 ORTHO05D005022 9.0e-38 161.0 137 54.0
Phvul.009G160200 Phaseolus vulgaris HOM05D004183 ORTHO05D005022 1.5e-37 160.2 137 53.3
FvH4_7g02460 Fragaria vesca HOM05D004183 ORTHO05D005022 2.0e-37 159.8 137 53.3
FAN06G5080 Fragaria x ananassa HOM05D004183 ORTHO05D005022 2.0e-37 159.8 137 53.3
C03p09610 Brassica napus HOM05D004183 ORTHO05D005022 2.6e-37 159.5 137 54.0
BcaB01g05214 Brassica carinata HOM05D004183 ORTHO05D005022 4.5e-37 158.7 137 54.0
CANSAT78G1267 Cannabis sativa HOM05D004183 ORTHO05D005022 5.8e-37 158.3 137 55.5
Medtr3g098060 Medicago truncatula HOM05D004183 ORTHO05D005022 7.6e-37 157.9 137 52.6
AT5G37130 Arabidopsis thaliana HOM05D004183 ORTHO05D005022 1.3e-36 157.1 137 54.0
A10p22130 Brassica napus HOM05D004183 ORTHO05D005022 2.2e-36 156.4 137 54.7
C09p59920 Brassica napus HOM05D004183 ORTHO05D005022 2.2e-36 156.4 137 54.7
BolC9t58828H Brassica oleracea HOM05D004183 ORTHO05D005022 2.2e-36 156.4 137 54.7
BraA10t44272Z Brassica rapa HOM05D004183 ORTHO05D005022 2.2e-36 156.4 137 54.7
Cc03_g10770 Coffea canephora HOM05D004183 ORTHO05D005022 2.9e-36 156.0 137 49.6
Sabra04G0053600 Salix brachista HOM05D004183 ORTHO05D005022 2.9e-36 156.0 147 49.7
Oeu006040.1 Olea europaea HOM05D004183 ORTHO05D005022 8.4e-36 154.5 137 51.8
Manes.10G067101 Manihot esculenta HOM05D004183 ORTHO05D005022 1.4e-35 153.7 137 53.3
TWI75G1732 Tripterygium wilfordii HOM05D004183 ORTHO05D005022 1.4e-35 153.7 137 52.6
CARHR154510 Cardamine hirsuta HOM05D004183 ORTHO05D005022 4.2e-35 152.1 137 54.0
AL6G28350 Arabidopsis lyrata HOM05D004183 ORTHO05D005022 7.9e-34 147.9 136 52.2
FAN03G0165 Fragaria x ananassa HOM05D004183 ORTHO05D005022 1.3e-33 147.1 135 51.9
Hund12628 Selenicereus undatus HOM05D004183 ORTHO05D005022 1.3e-33 147.1 120 56.7
Hund27690 Selenicereus undatus HOM05D004183 ORTHO05D005022 1.3e-33 147.1 120 56.7
Gohir.D01G083800 Gossypium hirsutum HOM05D004183 ORTHO05D005022 3.3e-32 142.5 137 48.9
Ciclev10033903m.g Citrus clementina HOM05D004183 ORTHO05D005022 7.4e-32 141.4 137 50.4
RcHm_v2.0_Chr1g0320601 Rosa chinensis HOM05D004183 ORTHO05D005022 1.3e-31 140.6 126 51.6
vmacro06007 Vaccinium macrocarpon HOM05D004183 ORTHO05D005022 4.1e-30 135.6 251 37.1
HPP92_011016 Vanilla planifolia HOM05D004183 ORTHO05D005022 4.1e-30 135.6 111 58.6
BcaC04g18812 Brassica carinata HOM05D004183 ORTHO05D005022 5.3e-30 135.2 114 56.1
RcHm_v2.0_Chr1g0319751 Rosa chinensis HOM05D004183 ORTHO05D005022 9.0e-30 134.4 114 53.5
AUR62031288 Chenopodium quinoa HOM05D004183 ORTHO05D005022 1.5e-29 133.7 118 52.5
AUR62027369 Chenopodium quinoa HOM05D004183 ORTHO05D005022 2.2e-28 129.8 143 46.9
RcHm_v2.0_Chr1g0319801 Rosa chinensis HOM05D004183 ORTHO05D005022 6.5e-28 128.3 109 52.3
Ciclev10030817m.g Citrus clementina HOM05D004183 ORTHO05D005022 1.1e-27 127.5 137 48.2
Ciclev10031844m.g Citrus clementina HOM05D004183 ORTHO05D005022 5.5e-27 125.2 137 46.0
MCO15G220 Micromonas commoda HOM05D004183 ORTHO05D005022 2.1e-26 123.2 137 45.3
CBR_g19343 Chara braunii HOM05D004183 ORTHO05D005022 3.0e-25 119.4 137 46.0
Ciclev10033659m.g Citrus clementina HOM05D004183 ORTHO05D005022 1.1e-24 117.5 137 43.1
Ciclev10031527m.g Citrus clementina HOM05D004183 ORTHO05D005022 1.3e-23 114.0 77 63.6
Ciclev10033525m.g Citrus clementina HOM05D004183 ORTHO05D005022 2.2e-23 113.2 138 42.8
FAN10G3177 Fragaria x ananassa HOM05D004183 ORTHO05D005022 1.1e-22 110.9 110 47.3
RcHm_v2.0_Chr1g0320901 Rosa chinensis HOM05D004183 ORTHO05D005022 1.5e-21 107.1 79 59.5
Cre09.g401700 Chlamydomonas reinhardtii HOM05D004183 ORTHO05D005022 2.2e-20 103.2 172 36.0
VMungo1309G2786 Vigna mungo HOM05D004183 ORTHO05D005022 2.1e-18 96.7 67 59.7
BraA03t10145Z Brassica rapa HOM05D004183 ORTHO05D005022 1.0e-17 94.4 60 66.7
Pp3c1_12830 Physcomitrium patens HOM05D004183 ORTHO05D005022 1.0e-17 94.4 137 41.6
RcHm_v2.0_Chr1g0320781 Rosa chinensis HOM05D004183 ORTHO05D005022 3.7e-15 85.9 96 44.8
RcHm_v2.0_Chr1g0320041 Rosa chinensis HOM05D004183 ORTHO05D005022 6.9e-14 81.6 102 40.2
SMO147G0329 Selaginella moellendorffii HOM05D004183 ORTHO05D005022 1.2e-13 80.9 60 55.0
CDE09G0586 Ceratophyllum demersum HOM05D004183 ORTHO05D005022 9.4e-11 71.2 75 45.3
VMungo1309G0357 Vigna mungo HOM05D004183 ORTHO05D005022 6.7e-09 65.1 46 63.0
VMungo1309G0778 Vigna mungo HOM05D004183 ORTHO05D005022 1.1e-08 64.3 50 58.0
PRCOL_00002789 Prasinoderma coloniale HOM05D004183 ORTHO05D005022 1.5e-08 63.9 80 37.5
Glyma.06G161100 Glycine max HOM05D004183 ORTHO05D005022 5.7e-08 62.0 47 59.6


User provided reference genes

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