Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 1.2e-52 209.5 106 100.0
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 9.2e-32 140.2 104 62.5
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 1.3e-30 136.3 104 61.5
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 3.0e-30 135.2 104 61.5
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 3.9e-30 134.8 104 61.5
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 3.9e-30 134.8 104 60.6
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 6.6e-30 134.0 103 61.2
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 6.6e-30 134.0 104 61.5
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 8.6e-30 133.7 104 60.6
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 8.6e-30 133.7 104 61.5
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 1.5e-29 132.9 106 60.4
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 2.5e-29 132.1 106 58.5
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 3.3e-29 131.7 103 60.2
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 5.6e-29 131.0 104 59.6
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 7.3e-29 130.6 104 57.7
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 9.5e-29 130.2 106 59.4
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 9.5e-29 130.2 105 59.0
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 1.2e-28 129.8 104 58.7
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.2e-28 129.8 104 57.7
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 1.2e-28 129.8 106 57.5
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 1.6e-28 129.4 103 56.3
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 2.1e-28 129.0 104 57.7
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 2.8e-28 128.6 106 58.5
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 2.8e-28 128.6 104 57.7
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 2.8e-28 128.6 104 60.6
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 2.8e-28 128.6 104 60.6
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 2.8e-28 128.6 104 58.7
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 3.6e-28 128.3 104 60.6
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 3.6e-28 128.3 104 57.7
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 3.6e-28 128.3 104 55.8
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 4.7e-28 127.9 103 58.3
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 4.7e-28 127.9 104 56.7
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 4.7e-28 127.9 104 57.7
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 4.7e-28 127.9 104 57.7
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 6.2e-28 127.5 105 59.0
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 6.2e-28 127.5 104 55.8
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 6.2e-28 127.5 104 60.6
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 8.0e-28 127.1 105 61.0
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 8.0e-28 127.1 105 55.2
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 8.0e-28 127.1 102 59.8
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 8.0e-28 127.1 106 57.5
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 8.0e-28 127.1 102 58.8
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.4e-27 126.3 104 56.7
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 1.8e-27 125.9 103 57.3
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 1.8e-27 125.9 106 56.6
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 1.8e-27 125.9 104 57.7
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.8e-27 125.9 103 58.3
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 1.8e-27 125.9 106 56.6
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 2.3e-27 125.6 106 56.6
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 2.3e-27 125.6 104 55.8
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.3e-27 125.6 101 57.4
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 3.1e-27 125.2 103 57.3
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 3.1e-27 125.2 101 60.4
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 5.2e-27 124.4 102 57.8
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 5.2e-27 124.4 103 57.3
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 5.2e-27 124.4 104 56.7
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 8.9e-27 123.6 101 56.4
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 8.9e-27 123.6 106 55.7
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 8.9e-27 123.6 104 57.7
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 8.9e-27 123.6 102 56.9
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 1.2e-26 123.2 104 54.8
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 1.2e-26 123.2 100 57.0
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 1.5e-26 122.9 105 59.0
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 1.5e-26 122.9 102 58.8
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 2.0e-26 122.5 106 55.7
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 2.0e-26 122.5 108 55.6
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 2.6e-26 122.1 104 58.7
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 2.6e-26 122.1 103 56.3
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 4.4e-26 121.3 101 57.4
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 9.8e-26 120.2 106 54.7
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 1.3e-25 119.8 104 55.8
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 1.3e-25 119.8 100 56.0
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 1.7e-25 119.4 106 53.8
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 1.7e-25 119.4 106 53.8
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 1.7e-25 119.4 104 55.8
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 2.2e-25 119.0 104 56.7
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 2.2e-25 119.0 105 54.3
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 2.2e-25 119.0 105 54.3
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 2.2e-25 119.0 99 61.6
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 2.2e-25 119.0 104 53.8
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 6.4e-25 117.5 103 55.3
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 6.4e-25 117.5 122 51.6
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 6.4e-25 117.5 98 58.2
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 6.4e-25 117.5 98 58.2
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 8.3e-25 117.1 98 59.2
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 8.3e-25 117.1 104 51.0
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 1.1e-24 116.7 101 58.4
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.1e-24 116.7 97 58.8
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.1e-24 116.7 97 58.8
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 2.4e-24 115.5 104 51.9
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 2.4e-24 115.5 101 58.4
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 2.4e-24 115.5 104 55.8
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 7.0e-24 114.0 104 51.0
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 1.2e-23 113.2 104 54.8
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 1.6e-23 112.8 102 54.9
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 2.7e-23 112.1 105 51.4
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 2.7e-23 112.1 94 53.2
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 2.7e-23 112.1 102 52.9
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 2.7e-23 112.1 127 46.5
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 2.7e-23 112.1 102 53.9
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 7.8e-23 110.5 102 53.9
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 7.8e-23 110.5 102 52.9
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.7e-22 109.4 102 53.9
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 1.7e-22 109.4 102 52.0
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 1.7e-22 109.4 102 52.9
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 1.7e-22 109.4 102 52.9
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 2.3e-22 109.0 102 52.9
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 5.0e-22 107.8 99 52.5
SEGI_15077 Sequoiadendron giganteum HOM05D002017 ORTHO05D007006 5.0e-22 107.8 55 92.7
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 6.6e-22 107.5 102 53.9
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 8.6e-22 107.1 103 50.5
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 2.5e-21 105.5 103 50.5
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 4.3e-21 104.8 102 50.0
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 5.6e-21 104.4 98 55.1
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 7.3e-21 104.0 103 49.5
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 1.2e-20 103.2 103 49.5
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 1.2e-20 103.2 103 49.5
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 1.2e-20 103.2 103 49.5
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 6.2e-20 100.9 104 52.9
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 1.8e-19 99.4 102 50.0
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 4.0e-19 98.2 102 49.0
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 8.9e-19 97.1 100 45.0
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 2.2e-17 92.4 98 49.0
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 3.7e-17 91.7 82 56.1
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 6.4e-17 90.9 100 47.0
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 1.4e-16 89.7 74 56.8
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 1.4e-16 89.7 93 50.5
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 6.0e-15 84.3 68 55.9
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 9.5e-13 77.0 81 45.7
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 8.1e-12 73.9 67 50.7
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 1.8e-11 72.8 68 42.6
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 1.5e-10 69.7 65 52.3
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 5.4e-08 61.2 66 45.5
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 7.1e-08 60.8 68 45.6
CBR_g23899 Chara braunii HOM05D005755 ORTHO05D007006 3.5e-07 58.5 103 34.0


User provided reference genes

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