Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26264 Sequoiadendron giganteum HOM05D062644 ORTHO05D001321 1.0e-44 183.0 89 100.0
SEGI_41330 Sequoiadendron giganteum HOM05D062644 ORTHO05D001321 1.0e-44 183.0 89 100.0
SEGI_22265 Sequoiadendron giganteum HOM05D001422 ORTHO05D001321 4.7e-13 77.8 58 63.8
Manes.15G093900 Manihot esculenta HOM05D001422 ORTHO05D001321 2.4e-09 65.5 79 44.3
SEGI_11167 Sequoiadendron giganteum HOM05D001422 ORTHO05D001321 4.1e-09 64.7 59 55.9
Potri.001G391200 Populus trichocarpa HOM05D001422 ORTHO05D001321 9.2e-09 63.5 69 47.8
Manes.15G094400 Manihot esculenta HOM05D001422 ORTHO05D001321 2.7e-08 62.0 79 44.3
HanXRQChr17g0564111 Helianthus annuus HOM05D001422 ORTHO05D001321 4.5e-08 61.2 67 50.7
ECA236G4058 Erigeron canadensis HOM05D001422 ORTHO05D001321 1.0e-07 60.1 68 45.6
CAN.G375.10 Capsicum annuum HOM05D001422 ORTHO05D001321 1.3e-07 59.7 65 49.2
Manes.15G094300 Manihot esculenta HOM05D001422 ORTHO05D001321 1.7e-07 59.3 50 56.0
PGSC0003DMG400007073 Solanum tuberosum HOM05D001422 ORTHO05D001321 1.7e-07 59.3 50 58.0
MBI06_g17903_MAGBIO Magnolia biondii HOM05D001422 ORTHO05D001321 2.3e-07 58.9 69 42.0
Manes.15G094100 Manihot esculenta HOM05D001422 ORTHO05D001321 2.3e-07 58.9 79 40.5
Sabra16G0256600 Salix brachista HOM05D001422 ORTHO05D001321 2.9e-07 58.5 55 50.9
CAN.G375.11 Capsicum annuum HOM05D001422 ORTHO05D001321 3.9e-07 58.2 49 57.1
Lsat_1_v5_gn_1_16741 Lactuca sativa HOM05D001422 ORTHO05D001321 3.9e-07 58.2 50 54.0
Sed0021845 Sechium edule HOM05D001422 ORTHO05D001321 3.9e-07 58.2 66 47.0
CANSAT01G2228 Cannabis sativa HOM05D001422 ORTHO05D001321 5.0e-07 57.8 72 43.1
Lsat_1_v5_gn_7_103561 Lactuca sativa HOM05D001422 ORTHO05D001321 6.6e-07 57.4 50 52.0
PGR083G1313 Punica granatum HOM05D001422 ORTHO05D001321 6.6e-07 57.4 55 49.1
Ah.06g185320 Amaranthus hybridus HOM05D001422 ORTHO05D001321 8.6e-07 57.0 60 48.3
Dinv18361 Davidia involucrata HOM05D001422 ORTHO05D001321 8.6e-07 57.0 50 54.0
HanXRQChr17g0564121 Helianthus annuus HOM05D001422 ORTHO05D001321 8.6e-07 57.0 50 54.0
Oeu031034.1 Olea europaea HOM05D001422 ORTHO05D001321 8.6e-07 57.0 65 46.2
COL.COLO4_17561 Corchorus olitorius HOM05D001422 ORTHO05D001321 1.1e-06 56.6 53 50.9
Lsat_1_v5_gn_7_102800 Lactuca sativa HOM05D001422 ORTHO05D001321 1.1e-06 56.6 50 56.0
Manes.15G094200 Manihot esculenta HOM05D001422 ORTHO05D001321 1.1e-06 56.6 50 52.0
Peaxi162Scf00069g02248 Petunia axillaris HOM05D001422 ORTHO05D001321 1.1e-06 56.6 50 58.0
SGA_v2.0_scaffold70G23372 Striga asiatica HOM05D001422 ORTHO05D001321 1.1e-06 56.6 59 50.8
TWI39G0797 Tripterygium wilfordii HOM05D001422 ORTHO05D001321 1.1e-06 56.6 62 45.2
HanXRQChr17g0558881 Helianthus annuus HOM05D001422 ORTHO05D001321 1.5e-06 56.2 64 46.9
Solyc07g062490.1 Solanum lycopersicum HOM05D001422 ORTHO05D001321 1.5e-06 56.2 63 49.2
TWI39G0453 Tripterygium wilfordii HOM05D001422 ORTHO05D001321 1.5e-06 56.2 62 45.2
Atru.chr2.2162 Acer truncatum HOM05D001422 ORTHO05D001321 1.9e-06 55.8 67 43.3
Gohir.A13G149301 Gossypium hirsutum HOM05D001422 ORTHO05D001321 1.9e-06 55.8 44 59.1
PSO384G0100 Papaver somniferum HOM05D001422 ORTHO05D001321 1.9e-06 55.8 50 54.0
Sed0002906 Sechium edule HOM05D001422 ORTHO05D001321 1.9e-06 55.8 49 53.1
COL.COLO4_31294 Corchorus olitorius HOM05D001422 ORTHO05D001321 2.5e-06 55.5 59 45.8
Gorai.013G173600 Gossypium raimondii HOM05D001422 ORTHO05D001321 2.5e-06 55.5 60 46.7
Lalb_Chr20g0109291 Lupinus albus HOM05D001422 ORTHO05D001321 2.5e-06 55.5 59 50.8
TPR.G40219 Trifolium pratense HOM05D001422 ORTHO05D001321 2.5e-06 55.5 66 47.0
Ah.06g185330 Amaranthus hybridus HOM05D001422 ORTHO05D001321 3.3e-06 55.1 75 40.0
Cpa.g.sc97.109 Carica papaya HOM05D001422 ORTHO05D001321 3.3e-06 55.1 54 48.1
Ciclev10020160m.g Citrus clementina HOM05D001422 ORTHO05D001321 3.3e-06 55.1 61 45.9
MD03G1242400 Malus domestica HOM05D001422 ORTHO05D001321 3.3e-06 55.1 50 54.0
FAN21G1542 Fragaria x ananassa HOM05D001422 ORTHO05D001321 4.3e-06 54.7 50 54.0
Glyma.13G270100 Glycine max HOM05D001422 ORTHO05D001321 4.3e-06 54.7 63 49.2
Gohir.A01G055500 Gossypium hirsutum HOM05D001422 ORTHO05D001321 4.3e-06 54.7 43 60.5
Gohir.A13G149200 Gossypium hirsutum HOM05D001422 ORTHO05D001321 4.3e-06 54.7 44 56.8
Gohir.D01G042764 Gossypium hirsutum HOM05D001422 ORTHO05D001321 4.3e-06 54.7 43 60.5
Gohir.D13G153700 Gossypium hirsutum HOM05D001422 ORTHO05D001321 4.3e-06 54.7 44 56.8
HanXRQChr11g0330411 Helianthus annuus HOM05D001422 ORTHO05D001321 4.3e-06 54.7 50 54.0
HanXRQChr11g0331071 Helianthus annuus HOM05D001422 ORTHO05D001321 4.3e-06 54.7 50 54.0
Solyc07g062480.2 Solanum lycopersicum HOM05D001422 ORTHO05D001321 4.3e-06 54.7 50 54.0
Sopen07g030720 Solanum pennellii HOM05D001422 ORTHO05D001321 4.3e-06 54.7 50 54.0
Sopen07g030730 Solanum pennellii HOM05D001422 ORTHO05D001321 4.3e-06 54.7 50 54.0
CiPaw.12G113800 Carya illinoinensis HOM05D001422 ORTHO05D001321 5.6e-06 54.3 49 49.0
MBI06_g45731_MAGBIO Magnolia biondii HOM05D001422 ORTHO05D001321 5.6e-06 54.3 70 38.6
MD11G1262100 Malus domestica HOM05D001422 ORTHO05D001321 5.6e-06 54.3 50 56.0
Lsat_1_v5_gn_7_102760 Lactuca sativa HOM05D001422 ORTHO05D001321 7.3e-06 53.9 49 51.0
Lj8C148T6 Lonicera japonica HOM05D001422 ORTHO05D001321 7.3e-06 53.9 49 51.0
MD11G1262300 Malus domestica HOM05D001422 ORTHO05D001321 7.3e-06 53.9 50 56.0
Phvul.005G061160 Phaseolus vulgaris HOM05D001422 ORTHO05D001321 7.3e-06 53.9 63 47.6
Phvul.005G065700 Phaseolus vulgaris HOM05D001422 ORTHO05D001321 7.3e-06 53.9 63 47.6
PGSC0003DMG402007101 Solanum tuberosum HOM05D001422 ORTHO05D001321 7.3e-06 53.9 50 54.0
COL.COLO4_17557 Corchorus olitorius HOM05D001422 ORTHO05D001321 9.5e-06 53.5 70 41.4
DCAR_027997 Daucus carota HOM05D001422 ORTHO05D001321 9.5e-06 53.5 72 41.7
PSO339G5022 Papaver somniferum HOM05D001422 ORTHO05D001321 9.5e-06 53.5 50 54.0
Psat5g238120 Pisum sativum HOM05D001422 ORTHO05D001321 9.5e-06 53.5 65 46.2
RcHm_v2.0_Chr5g0031031 Rosa chinensis HOM05D001422 ORTHO05D001321 9.5e-06 53.5 50 52.0


User provided reference genes

Program Settings