Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41306 Sequoiadendron giganteum HOM05D003393 ORTHO05D003916 4.7e-82 307.8 150 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1511 Anthoceros agrestis HOM05D003393 ORTHO05D003916 3.8e-23 112.1 76 72.4
Mapoly0191s0007 Marchantia polymorpha HOM05D003393 ORTHO05D003916 4.2e-22 108.6 77 72.7
Hund18508 Selenicereus undatus HOM05D003393 ORTHO05D003916 4.6e-21 105.1 104 52.9
AUR62001231 Chenopodium quinoa HOM05D003393 ORTHO05D003916 7.9e-21 104.4 104 52.9
Sc22g0004240 Simmondsia chinensis HOM05D003393 ORTHO05D003916 7.9e-21 104.4 104 52.9
AUR62022089 Chenopodium quinoa HOM05D003393 ORTHO05D003916 1.8e-20 103.2 104 52.9
Pp3c3_30500 Physcomitrium patens HOM05D003393 ORTHO05D003916 2.3e-20 102.8 92 62.0
EL10Ac7g18027 Beta vulgaris HOM05D003393 ORTHO05D003916 3.9e-20 102.1 104 51.0
THA.LOC104809275 Tarenaya hassleriana HOM05D003393 ORTHO05D003916 8.7e-20 100.9 73 67.1
CBR_g40121 Chara braunii HOM05D003393 ORTHO05D003916 1.5e-19 100.1 90 57.8
Pp3c4_2040 Physcomitrium patens HOM05D003393 ORTHO05D003916 1.5e-19 100.1 77 67.5
Aa31LG3G6040 Aethionema arabicum HOM05D003393 ORTHO05D003916 2.5e-19 99.4 75 62.7
arahy.Tifrunner.gnm1.ann1.B3LIJD Arachis hypogaea HOM05D003393 ORTHO05D003916 3.3e-19 99.0 74 63.5
arahy.Tifrunner.gnm1.ann1.MBC64I Arachis hypogaea HOM05D003393 ORTHO05D003916 3.3e-19 99.0 74 63.5
Pp3c6_22210 Physcomitrium patens HOM05D003393 ORTHO05D003916 3.3e-19 99.0 78 67.9
Pp3c6_26460 Physcomitrium patens HOM05D003393 ORTHO05D003916 4.3e-19 98.6 77 67.5
Ah.15g095510 Amaranthus hybridus HOM05D003393 ORTHO05D003916 5.7e-19 98.2 104 48.1
AagrBONN_evm.TU.Sc2ySwM_344.2053 Anthoceros agrestis HOM05D003393 ORTHO05D003916 5.7e-19 98.2 74 64.9
CDE09G0515 Ceratophyllum demersum HOM05D003393 ORTHO05D003916 5.7e-19 98.2 75 61.3
Thhalv10014311m.g Eutrema salsugineum HOM05D003393 ORTHO05D003916 5.7e-19 98.2 75 64.0
Peaxi162Scf00801g00734 Petunia axillaris HOM05D003393 ORTHO05D003916 5.7e-19 98.2 104 49.0
PGR044G1545 Punica granatum HOM05D003393 ORTHO05D003916 5.7e-19 98.2 75 64.0
Sp6g12340 Schrenkiella parvula HOM05D003393 ORTHO05D003916 5.7e-19 98.2 75 62.7
PGSC0003DMG400015226 Solanum tuberosum HOM05D003393 ORTHO05D003916 5.7e-19 98.2 104 50.0
CAN.G126.92 Capsicum annuum HOM05D003393 ORTHO05D003916 7.4e-19 97.8 104 50.0
Solyc03g111830.4 Solanum lycopersicum HOM05D003393 ORTHO05D003916 7.4e-19 97.8 104 50.0
Sopen03g030930 Solanum pennellii HOM05D003393 ORTHO05D003916 7.4e-19 97.8 104 50.0
Eucgr.B00176 Eucalyptus grandis HOM05D003393 ORTHO05D003916 9.7e-19 97.4 75 64.0
Sed0025533 Sechium edule HOM05D003393 ORTHO05D003916 9.7e-19 97.4 75 62.7
THA.LOC104818210 Tarenaya hassleriana HOM05D003393 ORTHO05D003916 9.7e-19 97.4 75 61.3
BcaB01g02907 Brassica carinata HOM05D003393 ORTHO05D003916 1.6e-18 96.7 75 62.7
Carub.0008s1024 Capsella rubella HOM05D003393 ORTHO05D003916 1.6e-18 96.7 75 61.3
Ciclev10021331m.g Citrus clementina HOM05D003393 ORTHO05D003916 1.6e-18 96.7 75 62.7
Nitab4.5_0000510g0140 Nicotiana tabacum HOM05D003393 ORTHO05D003916 1.6e-18 96.7 104 50.0
Nitab4.5_0003542g0050 Nicotiana tabacum HOM05D003393 ORTHO05D003916 1.6e-18 96.7 104 50.0
BraA03t11984Z Brassica rapa HOM05D003393 ORTHO05D003916 2.2e-18 96.3 75 62.7
Pp3c12_14550 Physcomitrium patens HOM05D003393 ORTHO05D003916 2.2e-18 96.3 77 66.2
Ah.08g218440 Amaranthus hybridus HOM05D003393 ORTHO05D003916 2.8e-18 95.9 104 49.0
AL8G24260 Arabidopsis lyrata HOM05D003393 ORTHO05D003916 2.8e-18 95.9 75 61.3
AT5G50240 Arabidopsis thaliana HOM05D003393 ORTHO05D003916 2.8e-18 95.9 75 61.3
A03p27720 Brassica napus HOM05D003393 ORTHO05D003916 3.7e-18 95.5 75 62.7
BcaC01g04824 Brassica carinata HOM05D003393 ORTHO05D003916 4.8e-18 95.1 75 62.7
C03p33450 Brassica napus HOM05D003393 ORTHO05D003916 4.8e-18 95.1 75 62.7
BolC3t15666H Brassica oleracea HOM05D003393 ORTHO05D003916 4.8e-18 95.1 75 62.7
MELO3C026245.2 Cucumis melo HOM05D003393 ORTHO05D003916 4.8e-18 95.1 75 61.3
CsaV3_1G000930 Cucumis sativus L. HOM05D003393 ORTHO05D003916 4.8e-18 95.1 75 61.3
Gohir.A12G186400 Gossypium hirsutum HOM05D003393 ORTHO05D003916 6.3e-18 94.7 79 59.5
Gohir.D12G189400 Gossypium hirsutum HOM05D003393 ORTHO05D003916 6.3e-18 94.7 79 59.5
Gorai.008G203200 Gossypium raimondii HOM05D003393 ORTHO05D003916 6.3e-18 94.7 79 59.5
HanXRQChr05g0145511 Helianthus annuus HOM05D003393 ORTHO05D003916 6.3e-18 94.7 75 60.0
Peaxi162Scf00089g00112 Petunia axillaris HOM05D003393 ORTHO05D003916 6.3e-18 94.7 104 49.0
Potri.012G090300 Populus trichocarpa HOM05D003393 ORTHO05D003916 6.3e-18 94.7 75 62.7
Potri.015G086600 Populus trichocarpa HOM05D003393 ORTHO05D003916 6.3e-18 94.7 75 61.3
Hund05609 Selenicereus undatus HOM05D003393 ORTHO05D003916 6.3e-18 94.7 104 49.0
unitig_0.g2227 Utricularia gibba HOM05D005172 ORTHO05D003916 6.3e-18 94.7 74 62.2
CDE09G0765 Ceratophyllum demersum HOM05D003393 ORTHO05D003916 8.2e-18 94.4 72 61.1
CBR_g18585 Chara braunii HOM05D003393 ORTHO05D003916 8.2e-18 94.4 88 55.7
Cc04_g10920 Coffea canephora HOM05D003393 ORTHO05D003916 8.2e-18 94.4 73 63.0
ECA232G0550 Erigeron canadensis HOM05D003393 ORTHO05D003916 8.2e-18 94.4 75 60.0
Lj4g0017032 Lotus japonicus HOM05D003393 ORTHO05D003916 8.2e-18 94.4 75 60.0
Manes.06G112100 Manihot esculenta HOM05D003393 ORTHO05D003916 8.2e-18 94.4 75 64.0
SalBow6G6880 Salvia bowleyana HOM05D003393 ORTHO05D003916 8.2e-18 94.4 74 60.8
TWI39G0503 Tripterygium wilfordii HOM05D003393 ORTHO05D003916 8.2e-18 94.4 75 58.7
Pp3c5_5200 Physcomitrium patens HOM05D003393 ORTHO05D003916 1.1e-17 94.0 77 64.9
TWI23G0769 Tripterygium wilfordii HOM05D003393 ORTHO05D003916 1.1e-17 94.0 75 60.0
CARHR258360 Cardamine hirsuta HOM05D003393 ORTHO05D003916 1.4e-17 93.6 73 60.3
ClCG06G017520 Citrullus lanatus HOM05D003393 ORTHO05D003916 1.4e-17 93.6 75 60.0
Nn4g22535 Nelumbo nucifera HOM05D003393 ORTHO05D003916 1.4e-17 93.6 75 61.3
Nitab4.5_0000025g0210 Nicotiana tabacum HOM05D003393 ORTHO05D003916 1.4e-17 93.6 104 47.1
Sed0024477 Sechium edule HOM05D003393 ORTHO05D003916 1.4e-17 93.6 75 60.0
BcaB02g10658 Brassica carinata HOM05D003393 ORTHO05D003916 1.8e-17 93.2 75 60.0
Migut.D02030 Erythranthe guttata HOM05D003393 ORTHO05D003916 1.8e-17 93.2 75 60.0
HanXRQChr09g0272631 Helianthus annuus HOM05D003393 ORTHO05D003916 1.8e-17 93.2 75 58.7
MBI10_g33730_MAGBIO Magnolia biondii HOM05D003393 ORTHO05D003916 1.8e-17 93.2 75 60.0
SHI17402 Sapria himalayana HOM05D000105 ORTHO05D000023 1.8e-17 93.2 76 60.5
HPP92_020227 Vanilla planifolia HOM05D003393 ORTHO05D003916 1.8e-17 93.2 87 58.6
MSTRG.4342 Avicennia marina HOM05D003393 ORTHO05D003916 3.1e-17 92.4 75 61.3
Gohir.A07G055200 Gossypium hirsutum HOM05D003393 ORTHO05D003916 3.1e-17 92.4 73 61.6
Gohir.D07G059500 Gossypium hirsutum HOM05D003393 ORTHO05D003916 3.1e-17 92.4 73 61.6
Gorai.001G063000 Gossypium raimondii HOM05D003393 ORTHO05D003916 3.1e-17 92.4 73 61.6
Medtr4g104440 Medicago truncatula HOM05D003393 ORTHO05D003916 3.1e-17 92.4 73 60.3
SGA_v2.0_scaffold7G04168 Striga asiatica HOM05D003393 ORTHO05D003916 3.1e-17 92.4 75 60.0
Aqoxy3G01291 Aquilegia oxysepala HOM05D003393 ORTHO05D003916 4.1e-17 92.0 75 60.0
Cfa009517 Carpinus fangiana HOM05D003393 ORTHO05D003916 4.1e-17 92.0 75 61.3
Migut.O00197 Erythranthe guttata HOM05D003393 ORTHO05D003916 4.1e-17 92.0 75 58.7
Manes.14G057500 Manihot esculenta HOM05D003393 ORTHO05D003916 4.1e-17 92.0 91 53.8
PSO017G7265 Papaver somniferum HOM05D003393 ORTHO05D003916 4.1e-17 92.0 75 58.7
Pp3c8_3810 Physcomitrium patens HOM05D003393 ORTHO05D003916 4.1e-17 92.0 73 61.6
QL10p005988 Quercus lobata HOM05D003393 ORTHO05D003916 4.1e-17 92.0 75 58.7
SMO116G0180 Selaginella moellendorffii HOM05D003393 ORTHO05D003916 4.1e-17 92.0 75 58.7
Ca_16114_v3 Cicer arietinum L. HOM05D003393 ORTHO05D003916 5.3e-17 91.7 75 58.7
Lj5A133T98 Lonicera japonica HOM05D003393 ORTHO05D003916 5.3e-17 91.7 79 57.0
Lj9A440T61 Lonicera japonica HOM05D003393 ORTHO05D003916 5.3e-17 91.7 75 61.3
Lj1g0015101 Lotus japonicus HOM05D003393 ORTHO05D003916 5.3e-17 91.7 75 58.7
Lalb_Chr12g0201981 Lupinus albus HOM05D003393 ORTHO05D003916 5.3e-17 91.7 75 58.7
Sabra15G0109400 Salix brachista HOM05D003393 ORTHO05D003916 5.3e-17 91.7 77 57.1
BcaC01g02333 Brassica carinata HOM05D003393 ORTHO05D003916 6.9e-17 91.3 75 58.7
A06p27570 Brassica napus HOM05D003393 ORTHO05D003916 6.9e-17 91.3 75 58.7
C03p66480 Brassica napus HOM05D003393 ORTHO05D003916 6.9e-17 91.3 75 58.7
BolC3t18920H Brassica oleracea HOM05D003393 ORTHO05D003916 6.9e-17 91.3 75 58.7
COL.COLO4_03350 Corchorus olitorius HOM05D003393 ORTHO05D003916 6.9e-17 91.3 73 60.3
Haze_07627 Corylus avellana HOM05D003393 ORTHO05D003916 6.9e-17 91.3 75 60.0
Lsat_1_v5_gn_4_78581 Lactuca sativa HOM05D003393 ORTHO05D003916 6.9e-17 91.3 75 58.7
Pp3c11_23520 Physcomitrium patens HOM05D003393 ORTHO05D003916 6.9e-17 91.3 90 52.2
Sabra12G0065100 Salix brachista HOM05D003393 ORTHO05D003916 6.9e-17 91.3 75 61.3
SMO137G0292 Selaginella moellendorffii HOM05D003393 ORTHO05D003916 6.9e-17 91.3 66 66.7
TAR629G1150 Trochodendron aralioides HOM05D003393 ORTHO05D003916 6.9e-17 91.3 75 61.3
VMungo1215G1394 Vigna mungo HOM05D003393 ORTHO05D003916 6.9e-17 91.3 73 60.3
Atru.chr9.1811 Acer truncatum HOM05D003393 ORTHO05D003916 9.0e-17 90.9 75 58.7
arahy.Tifrunner.gnm1.ann1.FAZ0NX Arachis hypogaea HOM05D003393 ORTHO05D003916 9.0e-17 90.9 73 58.9
BraA06t25697Z Brassica rapa HOM05D003393 ORTHO05D003916 9.0e-17 90.9 75 58.7
Cpa.g.sc4.12 Carica papaya HOM05D003393 ORTHO05D003916 9.0e-17 90.9 75 60.0
Duzib084G0608 Durio zibethinus HOM05D003393 ORTHO05D003916 9.0e-17 90.9 74 60.8
Medtr3g075470 Medicago truncatula HOM05D003393 ORTHO05D003916 9.0e-17 90.9 75 57.3
SalBow5G1694 Salvia bowleyana HOM05D003393 ORTHO05D003916 9.0e-17 90.9 75 60.0
SGA_v2.0_scaffold25G10781 Striga asiatica HOM05D003393 ORTHO05D003916 9.0e-17 90.9 73 58.9
Zm00001eb176270 Zea mays HOM05D003393 ORTHO05D003916 9.0e-17 90.9 75 57.3
arahy.Tifrunner.gnm1.ann1.2HQS5R Arachis hypogaea HOM05D003393 ORTHO05D003916 1.2e-16 90.5 73 58.9
CiPaw.11G015000 Carya illinoinensis HOM05D003393 ORTHO05D003916 1.2e-16 90.5 73 61.6
Glyma.04G190200 Glycine max HOM05D003393 ORTHO05D003916 1.2e-16 90.5 73 58.9
TPR.G24762 Trifolium pratense HOM05D003393 ORTHO05D003916 1.2e-16 90.5 75 57.3
Actinidia08838 Actinidia chinensis HOM05D003393 ORTHO05D003916 1.5e-16 90.1 75 58.7
CiPaw.12G033200 Carya illinoinensis HOM05D003393 ORTHO05D003916 1.5e-16 90.1 75 60.0
Dinv38502 Davidia involucrata HOM05D003393 ORTHO05D003916 1.5e-16 90.1 75 58.7
Glyma.05G043300 Glycine max HOM05D003393 ORTHO05D003916 1.5e-16 90.1 73 58.9
Gohir.A03G075600 Gossypium hirsutum HOM05D003393 ORTHO05D003916 1.5e-16 90.1 73 60.3
Oeu023464.1 Olea europaea HOM05D003393 ORTHO05D003916 1.5e-16 90.1 73 58.9
Os08g0557000 Oryza sativa ssp. japonica HOM05D003393 ORTHO05D003916 1.5e-16 90.1 75 56.0
Psat4g062080 Pisum sativum HOM05D003393 ORTHO05D003916 1.5e-16 90.1 73 58.9
Sp5g13720 Schrenkiella parvula HOM05D003393 ORTHO05D003916 1.5e-16 90.1 76 57.9
Thecc.03G118200 Theobroma cacao HOM05D003393 ORTHO05D003916 1.5e-16 90.1 73 60.3
HPP92_003739 Vanilla planifolia HOM05D003393 ORTHO05D003916 1.5e-16 90.1 75 57.3
AL5G27720 Arabidopsis lyrata HOM05D003393 ORTHO05D003916 2.0e-16 89.7 75 57.3
FAN04G1819 Fragaria x ananassa HOM05D003393 ORTHO05D003916 2.0e-16 89.7 76 57.9
Prupe.5G162200 Prunus persica HOM05D003393 ORTHO05D003916 2.0e-16 89.7 75 58.7
PGR083G0429 Punica granatum HOM05D003393 ORTHO05D003916 2.0e-16 89.7 75 58.7
RcHm_v2.0_Chr7g0191991 Rosa chinensis HOM05D003393 ORTHO05D003916 2.0e-16 89.7 75 58.7
TAR622G0655 Trochodendron aralioides HOM05D003393 ORTHO05D003916 2.0e-16 89.7 75 58.7
GSVIVG01007595001 Vitis vinifera HOM05D003393 ORTHO05D003916 2.0e-16 89.7 73 60.3
AT3G48330 Arabidopsis thaliana HOM05D003393 ORTHO05D003916 2.6e-16 89.4 75 57.3
Carub.0005s1450 Capsella rubella HOM05D003393 ORTHO05D003916 2.6e-16 89.4 73 58.9
CARHR157070 Cardamine hirsuta HOM05D003393 ORTHO05D003916 2.6e-16 89.4 75 57.3
DCAR_026195 Daucus carota HOM05D003393 ORTHO05D003916 2.6e-16 89.4 75 58.7
FvH4_5g06670 Fragaria vesca HOM05D003393 ORTHO05D003916 2.6e-16 89.4 75 58.7
FAN08G3611 Fragaria x ananassa HOM05D003393 ORTHO05D003916 2.6e-16 89.4 75 58.7
FAN18G4485 Fragaria x ananassa HOM05D003393 ORTHO05D003916 2.6e-16 89.4 75 58.7
Phvul.009G171400 Phaseolus vulgaris HOM05D003393 ORTHO05D003916 2.6e-16 89.4 73 58.9
VMungo1309G0086 Vigna mungo HOM05D003393 ORTHO05D003916 2.6e-16 89.4 73 58.9
MSTRG.9699 Avicennia marina HOM05D003393 ORTHO05D003916 3.4e-16 89.0 75 57.3
Thhalv10010684m.g Eutrema salsugineum HOM05D003393 ORTHO05D003916 3.4e-16 89.0 75 57.3
Gohir.D03G102300 Gossypium hirsutum HOM05D003393 ORTHO05D003916 3.4e-16 89.0 73 58.9
Gorai.003G107800 Gossypium raimondii HOM05D003393 ORTHO05D003916 3.4e-16 89.0 73 58.9
MD06G1161900 Malus domestica HOM05D003393 ORTHO05D003916 3.4e-16 89.0 75 58.7
MD14G1167700 Malus domestica HOM05D003393 ORTHO05D003916 3.4e-16 89.0 75 57.3
vmacro16685 Vaccinium macrocarpon HOM05D003393 ORTHO05D003916 3.4e-16 89.0 75 58.7
ATR0199G037 Amborella trichopoda HOM05D003393 ORTHO05D003916 4.5e-16 88.6 75 56.0
Oeu045493.1 Olea europaea HOM05D003393 ORTHO05D003916 4.5e-16 88.6 72 59.7
Phvul.003G206800 Phaseolus vulgaris HOM05D003393 ORTHO05D003916 4.5e-16 88.6 73 57.5
Aqoxy5G03667 Aquilegia oxysepala HOM05D003393 ORTHO05D003916 5.9e-16 88.2 75 58.7
FAN13G0421 Fragaria x ananassa HOM05D003393 ORTHO05D003916 5.9e-16 88.2 75 57.3
Rhsim12G0169800 Rhododendron simsii HOM05D003393 ORTHO05D003916 5.9e-16 88.2 75 57.3
Lalb_Chr11g0069891 Lupinus albus HOM05D003393 ORTHO05D003916 7.6e-16 87.8 73 57.5
Eucgr.K02777 Eucalyptus grandis HOM05D003393 ORTHO05D003916 1.0e-15 87.4 75 57.3
CSS0037129 Camellia sinensis var. sinensis HOM05D003393 ORTHO05D003916 1.7e-15 86.7 75 57.3
Aa31LG4G16900 Aethionema arabicum HOM05D003393 ORTHO05D003916 2.9e-15 85.9 75 54.7
CDE02G2727 Ceratophyllum demersum HOM05D003393 ORTHO05D003916 2.9e-15 85.9 70 57.1
TPR.G37513 Trifolium pratense HOM05D003393 ORTHO05D003916 3.8e-15 85.5 73 56.2
MSTRG.11512 Avicennia marina HOM05D003393 ORTHO05D003916 8.5e-15 84.3 75 56.0
Ca_19430_v3 Cicer arietinum L. HOM05D003393 ORTHO05D003916 1.4e-14 83.6 73 54.8
SalBow5G2064 Salvia bowleyana HOM05D003393 ORTHO05D003916 4.2e-14 82.0 71 57.7
MCO16G146 Micromonas commoda HOM05D003393 ORTHO05D003916 1.6e-13 80.1 75 56.0
Zm00001eb079410 Zea mays HOM05D003393 ORTHO05D003916 4.6e-13 78.6 44 81.8
AagrBONN_evm.TU.Sc2ySwM_117.1505 Anthoceros agrestis HOM05D003393 ORTHO05D003916 1.8e-12 76.6 43 83.7
Cre12.g557100 Chlamydomonas reinhardtii HOM05D003393 ORTHO05D003916 8.8e-12 74.3 75 50.7
Glyma.06G175300 Glycine max HOM05D003393 ORTHO05D003916 2.2e-10 69.7 42 71.4
Phvul.008G174600 Phaseolus vulgaris HOM05D003393 ORTHO05D003916 3.7e-10 68.9 42 71.4
Cfa022150 Carpinus fangiana HOM05D003393 ORTHO05D003916 6.3e-10 68.2 75 46.7
Nitab4.5_0000774g0080 Nicotiana tabacum HOM05D003393 ORTHO05D003916 1.4e-09 67.0 59 57.6
Cfa010506 Carpinus fangiana HOM05D003393 ORTHO05D003916 2.4e-09 66.2 71 49.3
PRCOL_00005768 Prasinoderma coloniale HOM05D003393 ORTHO05D003916 6.9e-09 64.7 76 47.4
Migut.O00194 Erythranthe guttata HOM05D003393 ORTHO05D003916 1.9e-06 56.6 74 41.9
Migut.O00196 Erythranthe guttata HOM05D003393 ORTHO05D003916 3.2e-06 55.8 61 47.5
Haze_07628 Corylus avellana HOM05D003393 ORTHO05D003916 5.5e-06 55.1 58 48.3


User provided reference genes

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