Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41219 Sequoiadendron giganteum HOM05D001047 ORTHO05D000768 2.2e-163 578.9 296 100.0
SEGI_30870 Sequoiadendron giganteum HOM05D001047 ORTHO05D000768 1.4e-24 117.9 220 41.8
HanXRQChr08g0212431 Helianthus annuus HOM05D002346 ORTHO05D002452 1.2e-09 68.2 174 36.8
SEGI_02697 Sequoiadendron giganteum HOM05D001047 ORTHO05D000768 6.1e-09 65.9 124 40.3
SEGI_14779 Sequoiadendron giganteum HOM05D001047 ORTHO05D000768 1.0e-08 65.1 124 41.9
Lsat_1_v5_gn_4_12800 Lactuca sativa HOM05D000033 ORTHO05D011929 1.8e-08 64.3 126 41.3
MD15G1225800 Malus domestica HOM05D001047 ORTHO05D000768 1.8e-08 64.3 117 38.5
Nitab4.5_0000073g0270 Nicotiana tabacum HOM05D001047 ORTHO05D000768 1.8e-08 64.3 124 41.1
Oeu025295.1 Olea europaea HOM05D001047 ORTHO05D000768 3.0e-08 63.5 141 38.3
vmacro17112 Vaccinium macrocarpon HOM05D001047 ORTHO05D000768 3.0e-08 63.5 125 41.6
ECA233G2759 Erigeron canadensis HOM05D002346 ORTHO05D002452 5.2e-08 62.8 178 34.3
ATR0006G052 Amborella trichopoda HOM05D001047 ORTHO05D000768 6.8e-08 62.4 117 41.9
Lj7A689T75 Lonicera japonica HOM05D001047 ORTHO05D000768 8.9e-08 62.0 173 36.4
Nitab4.5_0004234g0080 Nicotiana tabacum HOM05D001047 ORTHO05D000768 8.9e-08 62.0 124 38.7
SEGI_20867 Sequoiadendron giganteum HOM05D006285 ORTHO05D007249 2.0e-07 60.8 121 38.8
Sc08g0009060 Simmondsia chinensis HOM05D001047 ORTHO05D000768 2.0e-07 60.8 192 32.8
MSTRG.19445 Avicennia marina HOM05D001047 ORTHO05D000768 2.6e-07 60.5 125 38.4
PGR142G0155 Punica granatum HOM05D001047 ORTHO05D000768 3.4e-07 60.1 120 37.5
QL11p001290 Quercus lobata HOM05D001047 ORTHO05D000768 4.4e-07 59.7 130 40.0
Sopen01g045960 Solanum pennellii HOM05D001047 ORTHO05D000768 4.4e-07 59.7 130 33.8
MSTRG.10497 Avicennia marina HOM05D001047 ORTHO05D000768 5.7e-07 59.3 120 40.0
CAN.G1168.1 Capsicum annuum HOM05D001047 ORTHO05D000768 5.7e-07 59.3 147 32.7
Rhsim05G0004700 Rhododendron simsii HOM05D001047 ORTHO05D000768 5.7e-07 59.3 127 40.9
SEGI_23736 Sequoiadendron giganteum HOM05D006285 ORTHO05D007249 5.7e-07 59.3 121 42.1
COL.COLO4_18064 Corchorus olitorius HOM05D001047 ORTHO05D000768 7.5e-07 58.9 129 39.5
FvH4_1g09690 Fragaria vesca HOM05D001047 ORTHO05D000768 7.5e-07 58.9 154 29.9
Glyma.09G071600 Glycine max HOM05D001047 ORTHO05D000768 7.5e-07 58.9 119 38.7
Lsat_1_v5_gn_8_45621 Lactuca sativa HOM05D002346 ORTHO05D002452 7.5e-07 58.9 181 34.8
Peaxi162Scf00011g01124 Petunia axillaris HOM05D001047 ORTHO05D000768 7.5e-07 58.9 137 36.5
Zm00001eb109190 Zea mays HOM05D001047 ORTHO05D000768 7.5e-07 58.9 128 36.7
DCAR_028473 Daucus carota HOM05D001047 ORTHO05D000768 9.8e-07 58.5 146 38.4
Eucgr.C03301 Eucalyptus grandis HOM05D001047 ORTHO05D000768 9.8e-07 58.5 129 38.8
HanXRQChr12g0363391 Helianthus annuus HOM05D002346 ORTHO05D002452 9.8e-07 58.5 203 31.0
Peaxi162Scf00928g00130 Petunia axillaris HOM05D001047 ORTHO05D000768 9.8e-07 58.5 129 39.5
Lsat_1_v5_gn_5_139561 Lactuca sativa HOM05D001047 ORTHO05D000768 1.3e-06 58.2 182 30.8
Lalb_Chr08g0232721 Lupinus albus HOM05D001047 ORTHO05D000768 1.3e-06 58.2 121 42.1
TWI34G1575 Tripterygium wilfordii HOM05D001047 ORTHO05D000768 1.3e-06 58.2 125 40.0
Glyma.01G204400 Glycine max HOM05D001047 ORTHO05D000768 1.7e-06 57.8 117 39.3
MD15G1220400 Malus domestica HOM05D001047 ORTHO05D000768 1.7e-06 57.8 129 37.2
Oeu000285.1 Olea europaea HOM05D001047 ORTHO05D000768 1.7e-06 57.8 130 39.2
Os07g0615200 Oryza sativa ssp. japonica HOM05D001047 ORTHO05D000768 1.7e-06 57.8 126 38.9
Potri.006G139400 Populus trichocarpa HOM05D001047 ORTHO05D000768 1.7e-06 57.8 125 38.4
CANSAT56G3467 Cannabis sativa HOM05D001047 ORTHO05D000768 2.2e-06 57.4 189 32.8
CAN.G1661.25 Capsicum annuum HOM05D001047 ORTHO05D000768 2.2e-06 57.4 133 36.8
PGR044G1306 Punica granatum HOM05D001047 ORTHO05D000768 2.2e-06 57.4 127 36.2
Rhsim03G0226700 Rhododendron simsii HOM05D001047 ORTHO05D000768 2.2e-06 57.4 132 40.9
Sabra10G0079200 Salix brachista HOM05D002346 ORTHO05D002452 2.2e-06 57.4 217 31.3
GSVIVG01015042001 Vitis vinifera HOM05D001047 ORTHO05D000768 2.2e-06 57.4 126 35.7
AL6G23830 Arabidopsis lyrata HOM05D006285 ORTHO05D007249 2.9e-06 57.0 168 31.5
CANSAT56G4180 Cannabis sativa HOM05D001047 ORTHO05D000768 2.9e-06 57.0 190 32.6
CDE05G3091 Ceratophyllum demersum HOM05D002346 ORTHO05D002452 2.9e-06 57.0 144 34.0
COL.COLO4_17732 Corchorus olitorius HOM05D001047 ORTHO05D000768 2.9e-06 57.0 128 35.9
ECA246G1547 Erigeron canadensis HOM05D002346 ORTHO05D002452 2.9e-06 57.0 152 38.8
FAN04G1846 Fragaria x ananassa HOM05D002346 ORTHO05D002452 2.9e-06 57.0 214 30.4
Nitab4.5_0000343g0360 Nicotiana tabacum HOM05D001047 ORTHO05D000768 2.9e-06 57.0 141 35.5
Prupe.1G218500 Prunus persica HOM05D006285 ORTHO05D007249 2.9e-06 57.0 123 35.0
Sabra15G0029500 Salix brachista HOM05D002346 ORTHO05D002452 2.9e-06 57.0 237 31.2
TWI32G0022 Tripterygium wilfordii HOM05D001047 ORTHO05D000768 2.9e-06 57.0 121 41.3
Actinidia32203 Actinidia chinensis HOM05D001047 ORTHO05D000768 3.7e-06 56.6 128 37.5
MD13G1127100 Malus domestica HOM05D006285 ORTHO05D007249 3.7e-06 56.6 120 39.2
Manes.07G023500 Manihot esculenta HOM05D001047 ORTHO05D000768 3.7e-06 56.6 131 37.4
Peaxi162Scf00533g00059 Petunia axillaris HOM05D001047 ORTHO05D000768 3.7e-06 56.6 123 37.4
Prupe.7G189200 Prunus persica HOM05D001047 ORTHO05D000768 3.7e-06 56.6 117 39.3
Prupe.7G194800 Prunus persica HOM05D001047 ORTHO05D000768 3.7e-06 56.6 192 33.3
SalBow6G5825 Salvia bowleyana HOM05D001047 ORTHO05D000768 3.7e-06 56.6 136 36.8
CARHR191950 Cardamine hirsuta HOM05D001047 ORTHO05D000768 4.9e-06 56.2 118 35.6
Cpa.g.sc1667.1 Carica papaya HOM05D001047 ORTHO05D000768 4.9e-06 56.2 128 38.3
ClCG07G005870 Citrullus lanatus HOM05D002346 ORTHO05D002452 4.9e-06 56.2 223 30.9
Migut.L01582 Erythranthe guttata HOM05D001047 ORTHO05D000768 4.9e-06 56.2 126 38.1
FAN19G2610 Fragaria x ananassa HOM05D001047 ORTHO05D000768 4.9e-06 56.2 117 35.0
FAN26G1307 Fragaria x ananassa HOM05D001047 ORTHO05D000768 4.9e-06 56.2 117 35.0
Glyma.11G038600 Glycine max HOM05D001047 ORTHO05D000768 4.9e-06 56.2 118 39.0
Gohir.D05G036200 Gossypium hirsutum HOM05D001047 ORTHO05D000768 4.9e-06 56.2 129 36.4
Gorai.009G036800 Gossypium raimondii HOM05D001047 ORTHO05D000768 4.9e-06 56.2 129 36.4
THA.LOC104825472 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 4.9e-06 56.2 122 34.4
Ah.09g229090 Amaranthus hybridus HOM05D001047 ORTHO05D000768 6.4e-06 55.8 127 37.0
Cfa002963 Carpinus fangiana HOM05D001047 ORTHO05D000768 6.4e-06 55.8 123 38.2
Ca_02220_v3 Cicer arietinum L. HOM05D001047 ORTHO05D000768 6.4e-06 55.8 188 31.9
FAN26G1269 Fragaria x ananassa HOM05D001047 ORTHO05D000768 6.4e-06 55.8 117 35.0
Gohir.D02G174500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 6.4e-06 55.8 120 37.5
Gorai.005G196200 Gossypium raimondii HOM05D006285 ORTHO05D007249 6.4e-06 55.8 120 37.5
MD02G1096100 Malus domestica HOM05D001047 ORTHO05D000768 6.4e-06 55.8 130 39.2
Oeu060636.1 Olea europaea HOM05D001047 ORTHO05D000768 6.4e-06 55.8 169 33.7
HPP92_026310 Vanilla planifolia HOM05D001047 ORTHO05D000768 6.4e-06 55.8 136 33.8
VMungo1215G0723 Vigna mungo HOM05D001047 ORTHO05D000768 6.4e-06 55.8 157 35.7
Actinidia30242 Actinidia chinensis HOM05D001047 ORTHO05D000768 8.3e-06 55.5 192 30.7
C06p44750 Brassica napus HOM05D002346 ORTHO05D002452 8.3e-06 55.5 238 29.0
Cc00_g01970 Coffea canephora HOM05D002924 ORTHO05D003122 8.3e-06 55.5 140 34.3
CsaV3_6G007840 Cucumis sativus L. HOM05D006285 ORTHO05D007249 8.3e-06 55.5 127 35.4
Gohir.A03G151500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 8.3e-06 55.5 153 35.3
Gohir.A05G034800 Gossypium hirsutum HOM05D001047 ORTHO05D000768 8.3e-06 55.5 125 36.8
Gohir.A06G078400 Gossypium hirsutum HOM05D001047 ORTHO05D000768 8.3e-06 55.5 124 37.1
Hund18677 Selenicereus undatus HOM05D001047 ORTHO05D000768 8.3e-06 55.5 128 33.6
Sopen07g021770 Solanum pennellii HOM05D001047 ORTHO05D000768 8.3e-06 55.5 142 35.2


User provided reference genes

Program Settings