Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41210 Sequoiadendron giganteum HOM05D001362 ORTHO05D386780 5.8e-118 427.6 215 100.0
Actinidia30591 Actinidia chinensis HOM05D001362 ORTHO05D001310 3.1e-10 69.7 175 34.3
SEGI_25894 Sequoiadendron giganteum HOM05D001362 ORTHO05D001310 5.3e-10 68.9 78 50.0
HPP92_007041 Vanilla planifolia HOM05D001362 ORTHO05D001310 1.3e-08 64.3 103 39.8
arahy.Tifrunner.gnm1.ann1.D9KF4I Arachis hypogaea HOM05D001362 ORTHO05D001310 8.4e-08 61.6 113 34.5
Ciclev10030874m.g Citrus clementina HOM05D001362 ORTHO05D001310 8.4e-08 61.6 114 33.3
Nn3g16287 Nelumbo nucifera HOM05D001362 ORTHO05D001310 8.4e-08 61.6 148 33.1
Hund25506 Selenicereus undatus HOM05D001362 ORTHO05D001310 1.4e-07 60.8 104 37.5
unitig_8.g3118 Utricularia gibba HOM05D001362 ORTHO05D001310 1.4e-07 60.8 111 37.8
AUR62005710 Chenopodium quinoa HOM05D001362 ORTHO05D001310 1.9e-07 60.5 122 35.2
AUR62028845 Chenopodium quinoa HOM05D001362 ORTHO05D001310 1.9e-07 60.5 122 35.2
Nn4g22146 Nelumbo nucifera HOM05D001362 ORTHO05D001310 1.9e-07 60.5 105 37.1
Aqoxy5G03158 Aquilegia oxysepala HOM05D001362 ORTHO05D001310 2.4e-07 60.1 105 41.9
CANSAT64G2489 Cannabis sativa HOM05D001362 ORTHO05D001310 2.4e-07 60.1 137 32.8
Pp3c6_12760 Physcomitrium patens HOM05D001362 ORTHO05D001310 2.4e-07 60.1 76 44.7
Zm00001eb237250 Zea mays HOM05D001362 ORTHO05D001310 2.4e-07 60.1 102 35.3
QL10p000736 Quercus lobata HOM05D001362 ORTHO05D001310 3.2e-07 59.7 101 35.6
Sabra01G0046400 Salix brachista HOM05D001362 ORTHO05D001310 3.2e-07 59.7 101 37.6
Zm00001eb087360 Zea mays HOM05D001362 ORTHO05D020851 3.2e-07 59.7 73 46.6
Ca_10881_v3 Cicer arietinum L. HOM05D001362 ORTHO05D001310 4.2e-07 59.3 112 34.8
PSO017G4969 Papaver somniferum HOM05D001362 ORTHO05D001310 4.2e-07 59.3 144 31.2
PSO478G2522 Papaver somniferum HOM05D001362 ORTHO05D001310 4.2e-07 59.3 144 31.2
COL.COLO4_37244 Corchorus olitorius HOM05D001362 ORTHO05D001310 5.5e-07 58.9 113 34.5
Manes.09G187500 Manihot esculenta HOM05D001362 ORTHO05D001310 5.5e-07 58.9 101 36.6
Psat5g054680 Pisum sativum HOM05D000877 ORTHO05D001509 5.5e-07 58.9 113 33.6
Os09g0510700 Oryza sativa ssp. japonica HOM05D001362 ORTHO05D001310 7.1e-07 58.5 101 35.6
Sc04g0010530 Simmondsia chinensis HOM05D001362 ORTHO05D001310 7.1e-07 58.5 101 38.6
Zm00001eb129670 Zea mays HOM05D001362 ORTHO05D001310 7.1e-07 58.5 100 36.0
Zm00001eb175550 Zea mays HOM05D001362 ORTHO05D001310 7.1e-07 58.5 100 36.0
MBI07_g07337_MAGBIO Magnolia biondii HOM05D001362 ORTHO05D001310 9.3e-07 58.2 104 39.4
Potri.001G066800 Populus trichocarpa HOM05D001362 ORTHO05D001310 9.3e-07 58.2 105 38.1
Ca_16810_v3 Cicer arietinum L. HOM05D001362 ORTHO05D001310 1.2e-06 57.8 106 31.1
Dinv19303 Davidia involucrata HOM05D001362 ORTHO05D001310 1.2e-06 57.8 102 37.3
Eucgr.G01966 Eucalyptus grandis HOM05D001362 ORTHO05D001310 1.2e-06 57.8 100 37.0
Lj1g0005489 Lotus japonicus HOM05D001362 ORTHO05D001310 1.2e-06 57.8 110 35.5
Potri.003G163200 Populus trichocarpa HOM05D001362 ORTHO05D001310 1.2e-06 57.8 110 35.5
TPR.G4572 Trifolium pratense HOM05D001362 ORTHO05D001310 1.2e-06 57.8 110 35.5
unitig_22.g6380 Utricularia gibba HOM05D001362 ORTHO05D001310 1.2e-06 57.8 110 36.4
EL10Ac6g13605 Beta vulgaris HOM05D001362 ORTHO05D001310 1.6e-06 57.4 122 33.6
CANSAT56G1813 Cannabis sativa HOM05D001362 ORTHO05D001310 1.6e-06 57.4 121 33.1
Sabra03G0118700 Salix brachista HOM05D001362 ORTHO05D001310 1.6e-06 57.4 120 33.3
Zm00001eb037010 Zea mays HOM05D001362 ORTHO05D001310 1.6e-06 57.4 100 34.0
arahy.Tifrunner.gnm1.ann1.TQKX61 Arachis hypogaea HOM05D001362 ORTHO05D001310 2.1e-06 57.0 102 35.3
arahy.Tifrunner.gnm1.ann1.WVN0A7 Arachis hypogaea HOM05D001362 ORTHO05D001310 2.1e-06 57.0 102 32.4
Medtr8g100100 Medicago truncatula HOM05D001362 ORTHO05D001310 2.1e-06 57.0 106 33.0
Psat3g190200 Pisum sativum HOM05D001362 ORTHO05D001310 2.1e-06 57.0 106 35.8
RcHm_v2.0_Chr4g0428991 Rosa chinensis HOM05D001362 ORTHO05D001310 2.1e-06 57.0 117 35.0
Sc11g0000130 Simmondsia chinensis HOM05D001362 ORTHO05D001310 2.1e-06 57.0 91 46.2
Carub.0006s1147 Capsella rubella HOM05D001362 ORTHO05D001310 2.7e-06 56.6 102 39.2
Medtr7g020860 Medicago truncatula HOM05D001362 ORTHO05D001310 2.7e-06 56.6 110 34.5
Oeu019440.1 Olea europaea HOM05D001362 ORTHO05D001310 2.7e-06 56.6 110 35.5
Oeu019442.1 Olea europaea HOM05D001362 ORTHO05D001310 2.7e-06 56.6 110 35.5
PGR119G1475 Punica granatum HOM05D001362 ORTHO05D001310 2.7e-06 56.6 100 36.0
TPR.G12802 Trifolium pratense HOM05D001362 ORTHO05D001310 2.7e-06 56.6 119 32.8
TAR629G2226 Trochodendron aralioides HOM05D001362 ORTHO05D001310 2.7e-06 56.6 105 39.0
arahy.Tifrunner.gnm1.ann1.TD68IP Arachis hypogaea HOM05D001362 ORTHO05D001310 3.5e-06 56.2 102 37.3
arahy.Tifrunner.gnm1.ann1.UP9I24 Arachis hypogaea HOM05D001362 ORTHO05D001310 3.5e-06 56.2 102 37.3
Migut.K01064 Erythranthe guttata HOM05D001362 ORTHO05D001310 3.5e-06 56.2 125 35.2
Gohir.D02G175100 Gossypium hirsutum HOM05D001362 ORTHO05D001310 3.5e-06 56.2 118 35.6
Gorai.005G196700 Gossypium raimondii HOM05D001362 ORTHO05D001310 3.5e-06 56.2 118 35.6
Os08g0537600 Oryza sativa ssp. japonica HOM05D001362 ORTHO05D001310 3.5e-06 56.2 172 29.1
Atru.chr6.1907 Acer truncatum HOM05D001362 ORTHO05D001310 4.6e-06 55.8 115 33.0
Ah.03g135580 Amaranthus hybridus HOM05D001362 ORTHO05D001310 4.6e-06 55.8 101 36.6
Cfa009443 Carpinus fangiana HOM05D001362 ORTHO05D001310 4.6e-06 55.8 110 34.5
Ciclev10004318m.g Citrus clementina HOM05D001362 ORTHO05D001310 4.6e-06 55.8 144 31.9
HanXRQChr17g0540671 Helianthus annuus HOM05D001362 ORTHO05D001310 4.6e-06 55.8 100 34.0
AL6G23920 Arabidopsis lyrata HOM05D001362 ORTHO05D001310 6.0e-06 55.5 102 38.2
Cc11_g15080 Coffea canephora HOM05D001362 ORTHO05D001310 6.0e-06 55.5 111 33.3
Haze_07106 Corylus avellana HOM05D001362 ORTHO05D001310 6.0e-06 55.5 101 34.7
Lsat_1_v5_gn_4_1580 Lactuca sativa HOM05D001362 ORTHO05D001310 6.0e-06 55.5 125 32.8
Manes.06G126100 Manihot esculenta HOM05D001362 ORTHO05D001310 6.0e-06 55.5 113 31.9
Oeu044512.1 Olea europaea HOM05D001362 ORTHO05D001310 6.0e-06 55.5 106 33.0
SalBow2G3327 Salvia bowleyana HOM05D001362 ORTHO05D001310 6.0e-06 55.5 101 35.6
AT5G13300 Arabidopsis thaliana HOM05D001362 ORTHO05D001310 7.9e-06 55.1 102 38.2
arahy.Tifrunner.gnm1.ann1.SL3LA8 Arachis hypogaea HOM05D001362 ORTHO05D001310 7.9e-06 55.1 156 28.8
CSS0043430 Camellia sinensis var. sinensis HOM05D001362 ORTHO05D001310 7.9e-06 55.1 102 39.2
CiPaw.05G164100 Carya illinoinensis HOM05D001362 ORTHO05D001310 7.9e-06 55.1 148 33.8
FvH4_4g22770 Fragaria vesca HOM05D001362 ORTHO05D001310 7.9e-06 55.1 117 34.2
FAN07G1053 Fragaria x ananassa HOM05D001362 ORTHO05D001310 7.9e-06 55.1 117 34.2
FAN12G1930 Fragaria x ananassa HOM05D001362 ORTHO05D001310 7.9e-06 55.1 117 34.2
FAN12G3894 Fragaria x ananassa HOM05D001362 ORTHO05D001310 7.9e-06 55.1 117 34.2
FAN17G1894 Fragaria x ananassa HOM05D001362 ORTHO05D001310 7.9e-06 55.1 117 34.2
Lj4g0013823 Lotus japonicus HOM05D001362 ORTHO05D001310 7.9e-06 55.1 106 31.1
Manes.08G101900 Manihot esculenta HOM05D001362 ORTHO05D001310 7.9e-06 55.1 110 34.5
SGA_v2.0_scaffold258G45788 Striga asiatica HOM05D001362 ORTHO05D001310 7.9e-06 55.1 104 39.4


User provided reference genes

Program Settings