Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41100 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.6e-191 672.5 338 100.0
SEGI_09994 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.7e-153 544.3 373 76.4
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.7e-153 544.3 373 76.4
SEGI_26119 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.7e-103 379.0 289 68.2
SEGI_10162 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.9e-94 350.1 280 67.9
SEGI_10836 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.6e-85 318.9 224 72.3
SEGI_40357 Sequoiadendron giganteum HOM05D003580 ORTHO05D000003 2.6e-80 303.1 249 65.1
SEGI_02603 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.3e-76 290.0 278 59.7
SEGI_20620 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.8e-72 275.4 169 78.7
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 1.7e-71 273.9 366 42.1
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 3.2e-70 269.6 364 41.2
SEGI_17593 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.0e-68 263.1 160 79.4
SEGI_40013 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.6e-66 257.3 156 80.8
SEGI_01451 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.2e-66 255.4 158 77.8
SEGI_18317 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-65 254.6 261 56.3
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 1.4e-65 254.2 363 39.4
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 9.0e-65 251.5 368 39.4
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 5.8e-64 248.8 363 39.1
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 1.0e-63 248.1 363 38.3
SEGI_21703 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.0e-63 248.1 172 72.7
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 1.3e-63 247.7 367 39.8
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 2.9e-63 246.5 333 41.1
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 2.9e-63 246.5 363 37.7
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 8.4e-63 245.0 371 37.5
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 1.1e-62 244.6 376 37.2
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 1.9e-62 243.8 369 38.8
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 2.5e-62 243.4 363 38.3
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 2.5e-62 243.4 370 38.6
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 2.5e-62 243.4 367 40.1
Cpa.g.sc440.1 Carica papaya HOM05D003580 ORTHO05D004441 3.2e-62 243.0 368 36.7
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 3.2e-62 243.0 367 40.6
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 3.2e-62 243.0 363 38.3
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 4.2e-62 242.7 363 38.6
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 4.2e-62 242.7 370 36.2
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 5.5e-62 242.3 367 39.8
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 7.1e-62 241.9 363 38.0
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 7.1e-62 241.9 365 38.1
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 9.3e-62 241.5 367 37.1
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 9.3e-62 241.5 377 36.6
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 1.2e-61 241.1 368 37.2
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 1.6e-61 240.7 370 37.6
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 1.6e-61 240.7 377 36.6
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 3.5e-61 239.6 370 36.5
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 3.5e-61 239.6 377 36.6
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 4.6e-61 239.2 368 37.5
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 7.9e-61 238.4 367 38.1
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 1.0e-60 238.0 368 38.9
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 1.8e-60 237.3 363 37.7
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 2.3e-60 236.9 363 37.2
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 3.0e-60 236.5 364 38.5
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 3.0e-60 236.5 364 38.5
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 3.9e-60 236.1 363 38.6
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 3.9e-60 236.1 376 38.6
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 5.1e-60 235.7 377 36.9
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 5.1e-60 235.7 364 38.5
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 8.7e-60 235.0 365 37.5
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 1.1e-59 234.6 367 37.3
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 1.1e-59 234.6 363 37.7
SEGI_22494 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-59 234.6 146 80.1
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 1.5e-59 234.2 367 37.6
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 1.9e-59 233.8 363 38.0
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 2.5e-59 233.4 366 37.4
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 2.5e-59 233.4 366 38.8
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 4.3e-59 232.6 363 37.5
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 4.3e-59 232.6 367 36.8
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 5.7e-59 232.3 363 36.6
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 5.7e-59 232.3 368 36.7
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 7.4e-59 231.9 363 37.7
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 7.4e-59 231.9 368 38.0
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 7.4e-59 231.9 366 36.9
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 9.7e-59 231.5 363 36.6
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 9.7e-59 231.5 363 37.5
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 1.3e-58 231.1 363 36.4
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 1.3e-58 231.1 368 35.3
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 1.6e-58 230.7 368 37.8
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 2.1e-58 230.3 372 36.3
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 2.8e-58 229.9 364 37.4
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 2.8e-58 229.9 379 35.6
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 3.7e-58 229.6 359 34.8
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 3.7e-58 229.6 377 37.4
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 3.7e-58 229.6 363 36.4
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 4.8e-58 229.2 363 36.6
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 4.8e-58 229.2 363 36.6
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 4.8e-58 229.2 367 36.0
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 6.3e-58 228.8 363 36.6
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 8.2e-58 228.4 363 36.4
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 8.2e-58 228.4 363 37.5
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 8.2e-58 228.4 363 38.0
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 1.1e-57 228.0 363 37.7
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 1.4e-57 227.6 363 36.9
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 1.4e-57 227.6 368 37.2
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 1.8e-57 227.3 366 37.2
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.8e-57 227.3 368 37.2
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 1.8e-57 227.3 350 36.3
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 2.4e-57 226.9 367 36.2
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 2.4e-57 226.9 357 38.1
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 3.1e-57 226.5 367 36.2
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 3.1e-57 226.5 366 37.2
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 3.1e-57 226.5 356 39.0
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 5.3e-57 225.7 370 35.7
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 5.3e-57 225.7 363 36.1
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 5.3e-57 225.7 366 36.3
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 6.9e-57 225.3 362 36.7
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 6.9e-57 225.3 370 35.7
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 6.9e-57 225.3 363 36.1
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 9.0e-57 224.9 363 37.2
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 1.2e-56 224.6 328 39.0
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 1.5e-56 224.2 344 38.1
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 2.0e-56 223.8 376 34.8
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 7.6e-56 221.9 373 35.1
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 1.0e-55 221.5 330 39.7
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 1.0e-55 221.5 370 35.1
SEGI_12986 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.0e-55 221.5 148 73.6
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 1.3e-55 221.1 379 35.6
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 1.3e-55 221.1 366 35.5
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 5.0e-55 219.2 366 34.7
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 1.9e-54 217.2 344 38.4
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 4.2e-54 216.1 357 38.7
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 5.5e-54 215.7 383 35.2
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 9.3e-54 214.9 378 33.1
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.2e-53 214.5 354 38.4
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 2.1e-53 213.8 354 38.7
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.1e-53 213.8 354 38.7
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 2.1e-53 213.8 388 36.3
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.7e-53 213.4 354 38.4
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 9.7e-51 204.9 327 34.9
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 2.8e-50 203.4 394 35.8
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 3.7e-50 203.0 366 36.3
Cfa002308 Carpinus fangiana HOM05D003580 ORTHO05D004441 6.3e-50 202.2 237 44.7
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 1.1e-49 201.4 340 35.3
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 1.8e-49 200.7 332 36.1
SEGI_37648 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.3e-49 199.1 122 81.1
SEGI_23236 Sequoiadendron giganteum HOM05D003580 ORTHO05D000001 1.2e-48 198.0 124 77.4
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 3.4e-48 196.4 370 31.4
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 7.7e-48 195.3 402 33.8
SEGI_24255 Sequoiadendron giganteum HOM05D000018 ORTHO05D003948 1.3e-47 194.5 124 75.0
Dinv14589 Davidia involucrata HOM05D003580 ORTHO05D004441 1.7e-47 194.1 194 47.9
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 3.8e-47 193.0 350 36.0
SEGI_00259 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-46 191.4 129 74.4
SEGI_37860 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.2e-46 189.9 124 72.6
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 2.3e-44 183.7 406 33.0
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 2.3e-44 183.7 297 35.7
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 1.5e-43 181.0 367 33.8
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 5.7e-43 179.1 367 33.2
SEGI_07846 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.5e-38 163.7 114 73.7
SEGI_13143 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.2e-38 162.2 103 76.7
Eucgr.A01176 Eucalyptus grandis HOM05D003580 ORTHO05D004441 9.4e-38 161.8 242 36.8
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 9.4e-38 161.8 350 33.4
SEGI_32072 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-35 154.8 95 77.9
CBR_g38826 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-33 147.5 197 40.6
SEGI_00546 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.5e-32 143.3 112 64.3
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 4.0e-28 129.8 265 35.1
Atru.chr10.123 Acer truncatum HOM05D003580 ORTHO05D004441 2.2e-26 124.0 100 54.0
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 7.0e-25 119.0 253 33.6
SEGI_06299 Sequoiadendron giganteum HOM05D003580 ORTHO05D019257 1.7e-18 97.8 57 80.7
SEGI_40445 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.0e-15 88.6 58 79.3
Atru.chr10.105 Acer truncatum HOM05D003580 ORTHO05D004441 1.1e-14 85.1 53 67.9
Nitab4.5_0000001g0420 Nicotiana tabacum HOM05D003580 ORTHO05D004441 3.0e-12 77.0 230 27.4
Nitab4.5_0000693g0020 Nicotiana tabacum HOM05D003580 ORTHO05D004441 2.4e-09 67.4 217 26.7
Dinv14590 Davidia involucrata HOM05D003580 ORTHO05D004441 1.2e-08 65.1 92 41.3


User provided reference genes

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