Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.9e-113 412.5 208 100.0
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.4e-63 246.9 131 100.0
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 1.0e-55 220.7 156 69.2
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 1.0e-55 220.7 191 62.8
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 1.0e-55 220.7 156 69.9
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 1.8e-55 219.9 153 69.9
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 2.0e-54 216.5 138 75.4
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 5.8e-54 214.9 194 60.8
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 9.8e-54 214.2 193 62.2
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 4.9e-53 211.8 156 67.3
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 6.4e-53 211.5 191 63.9
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 1.1e-52 210.7 141 72.3
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 1.9e-52 209.9 188 59.6
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 1.9e-52 209.9 182 62.6
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 1.9e-52 209.9 195 58.5
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 2.4e-52 209.5 187 59.4
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 4.1e-52 208.8 182 61.5
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 4.1e-52 208.8 184 59.8
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 4.1e-52 208.8 192 61.5
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 4.1e-52 208.8 156 69.9
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 4.1e-52 208.8 147 68.7
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 9.2e-52 207.6 196 58.2
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 1.2e-51 207.2 137 70.8
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 1.2e-51 207.2 190 58.9
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 1.2e-51 207.2 141 71.6
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 1.6e-51 206.8 141 71.6
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.6e-51 206.8 203 54.7
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 2.0e-51 206.5 193 58.0
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 2.0e-51 206.5 198 58.6
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 2.7e-51 206.1 177 61.6
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 2.7e-51 206.1 210 54.8
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 3.5e-51 205.7 172 61.0
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 3.5e-51 205.7 147 68.7
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 4.6e-51 205.3 193 59.6
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 7.8e-51 204.5 194 58.2
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 1.0e-50 204.1 141 70.9
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 1.0e-50 204.1 141 70.9
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 1.0e-50 204.1 141 70.9
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 1.0e-50 204.1 141 70.9
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 1.0e-50 204.1 143 69.2
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 1.0e-50 204.1 139 71.2
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 1.0e-50 204.1 178 61.2
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 1.3e-50 203.8 194 58.2
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 1.7e-50 203.4 186 59.7
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 2.3e-50 203.0 192 57.8
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 3.0e-50 202.6 178 60.7
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 3.0e-50 202.6 191 57.1
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 3.9e-50 202.2 156 66.7
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 5.0e-50 201.8 176 61.4
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 6.6e-50 201.4 149 66.4
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 1.1e-49 200.7 189 56.6
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 1.5e-49 200.3 149 66.4
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 1.9e-49 199.9 188 57.4
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 2.5e-49 199.5 203 56.7
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 2.5e-49 199.5 193 56.0
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 4.3e-49 198.7 196 56.1
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 7.3e-49 198.0 182 57.7
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 9.5e-49 197.6 193 58.5
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 1.2e-48 197.2 194 58.2
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 1.2e-48 197.2 190 56.3
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 1.2e-48 197.2 190 57.9
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 1.6e-48 196.8 187 58.3
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 2.8e-48 196.1 198 56.6
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 6.2e-48 194.9 190 57.9
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 6.2e-48 194.9 183 55.2
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 8.0e-48 194.5 187 57.2
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 1.1e-47 194.1 187 57.2
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 3.1e-47 192.6 193 57.0
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 3.1e-47 192.6 189 57.7
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 3.1e-47 192.6 157 62.4
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 4.0e-47 192.2 189 57.1
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 5.2e-47 191.8 177 58.2
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 6.8e-47 191.4 197 56.3
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 6.8e-47 191.4 184 57.6
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 6.8e-47 191.4 185 56.2
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 8.9e-47 191.0 152 63.2
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 1.5e-46 190.3 193 56.5
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 3.4e-46 189.1 195 55.4
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 7.5e-46 188.0 144 60.4
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 9.8e-46 187.6 194 55.7
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 9.8e-46 187.6 184 57.1
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 4.9e-45 185.3 156 61.5
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 4.9e-45 185.3 177 57.6
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 4.9e-45 185.3 177 57.6
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 4.9e-45 185.3 188 55.9
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 6.4e-45 184.9 162 59.9
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 1.9e-44 183.3 139 65.5
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 4.1e-44 182.2 190 53.7
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 7.0e-44 181.4 185 55.1
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.2e-43 180.6 218 51.8
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 6.0e-43 178.3 173 55.5
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.7e-42 176.8 175 57.7
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 2.5e-41 172.9 177 58.2
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 2.1e-40 169.9 113 69.0
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 2.9e-37 159.5 209 47.4
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 1.3e-34 150.6 148 50.7
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.6e-34 148.3 154 55.2
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 1.1e-31 141.0 150 50.0
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 1.4e-31 140.6 184 47.8
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 4.0e-31 139.0 212 49.1
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 6.8e-31 138.3 153 49.7
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 1.9e-28 130.2 84 67.9
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 3.3e-25 119.4 67 77.6
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.3e-21 107.5 106 50.9
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 4.3e-17 92.4 53 79.2
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 1.7e-13 80.5 63 60.3
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 8.4e-13 78.2 94 53.2
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 4.6e-11 72.4 69 62.3
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 3.9e-10 69.3 62 56.5


User provided reference genes

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