Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41090 Sequoiadendron giganteum HOM05D013007 ORTHO05D000843 6.4e-91 337.4 173 100.0
SEGI_26978 Sequoiadendron giganteum HOM05D000312 ORTHO05D000221 2.6e-20 102.8 91 59.3
SEGI_34020 Sequoiadendron giganteum HOM05D000312 ORTHO05D000221 6.5e-11 71.6 74 52.7
SEGI_40816 Sequoiadendron giganteum HOM05D000312 ORTHO05D000221 3.2e-10 69.3 74 51.4
SEGI_34219 Sequoiadendron giganteum HOM05D000312 ORTHO05D000221 2.7e-09 66.2 91 47.3
Manes.10G076100 Manihot esculenta HOM05D000576 ORTHO05D000368 1.0e-08 64.3 75 49.3
HanXRQChr14g0428571 Helianthus annuus HOM05D001243 ORTHO05D000843 6.8e-08 61.6 50 60.0
SEGI_35727 Sequoiadendron giganteum HOM05D013007 ORTHO05D000221 6.8e-08 61.6 72 51.4
SEGI_31553 Sequoiadendron giganteum HOM05D013007 ORTHO05D000221 8.8e-08 61.2 41 70.7
Glyma.02G127100 Glycine max HOM05D000312 ORTHO05D000221 1.2e-07 60.8 76 42.1
Glyma.02G126900 Glycine max HOM05D000312 ORTHO05D000221 1.5e-07 60.5 76 42.1
SEGI_07455 Sequoiadendron giganteum HOM05D013007 ORTHO05D000221 1.5e-07 60.5 74 50.0
CiPaw.01G228300 Carya illinoinensis HOM05D001995 ORTHO05D001952 2.0e-07 60.1 59 49.2
QL04p018450 Quercus lobata HOM05D001396 ORTHO05D000493 2.0e-07 60.1 72 45.8
HanXRQChr17g0536451 Helianthus annuus HOM05D001243 ORTHO05D000843 2.6e-07 59.7 66 45.5
PSO541G5950 Papaver somniferum HOM05D000051 ORTHO05D000015 3.4e-07 59.3 92 37.0
Psat6g111120 Pisum sativum HOM05D001243 ORTHO05D000843 3.4e-07 59.3 59 49.2
SEGI_12930 Sequoiadendron giganteum HOM05D013007 ORTHO05D000221 3.4e-07 59.3 74 50.0
SEGI_11304 Sequoiadendron giganteum HOM05D013007 ORTHO05D000221 4.4e-07 58.9 76 48.7
Dinv29497 Davidia involucrata HOM05D000576 ORTHO05D000368 5.7e-07 58.5 94 31.9
Migut.M00834 Erythranthe guttata HOM05D000051 ORTHO05D000015 5.7e-07 58.5 77 42.9
Rhsim13G0173100 Rhododendron simsii HOM05D001396 ORTHO05D000493 5.7e-07 58.5 95 37.9
CSS0005465 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 9.8e-07 57.8 82 42.7
HanXRQChr05g0143081 Helianthus annuus HOM05D001243 ORTHO05D000843 9.8e-07 57.8 88 38.6
HanXRQChr17g0536861 Helianthus annuus HOM05D001243 ORTHO05D000843 1.3e-06 57.4 49 55.1
PSO675G4389 Papaver somniferum HOM05D000051 ORTHO05D000015 1.3e-06 57.4 62 43.5
Rhsim13G0172700 Rhododendron simsii HOM05D001396 ORTHO05D000493 1.3e-06 57.4 60 50.0
Rhsim13G0173200 Rhododendron simsii HOM05D001396 ORTHO05D000493 1.3e-06 57.4 95 36.8
Thhalv10013489m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.7e-06 57.0 77 41.6
HanXRQChr14g0428541 Helianthus annuus HOM05D001243 ORTHO05D000843 1.7e-06 57.0 50 54.0
PSO675G8734 Papaver somniferum HOM05D000051 ORTHO05D000015 1.7e-06 57.0 92 34.8
Aqoxy3G00922 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 2.2e-06 56.6 80 42.5
Migut.I01046 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.2e-06 56.6 62 46.8
HanXRQChr06g0172661 Helianthus annuus HOM05D001243 ORTHO05D000843 2.2e-06 56.6 62 53.2
HanXRQChr11g0327971 Helianthus annuus HOM05D001243 ORTHO05D000843 2.2e-06 56.6 54 51.9
Potri.015G002100 Populus trichocarpa HOM05D001243 ORTHO05D000843 2.2e-06 56.6 45 60.0
QL05p074559 Quercus lobata HOM05D000051 ORTHO05D000015 2.2e-06 56.6 59 52.5
Sp4g03380 Schrenkiella parvula HOM05D000051 ORTHO05D000015 2.2e-06 56.6 98 37.8
SGA_v2.0_scaffold34G13740 Striga asiatica HOM05D000051 ORTHO05D000015 2.2e-06 56.6 97 38.1
COL.COLO4_31621 Corchorus olitorius HOM05D010825 ORTHO05D012667 2.8e-06 56.2 83 39.8
ECA234G1514 Erigeron canadensis HOM05D001243 ORTHO05D000843 2.8e-06 56.2 65 43.1
QL05p074592 Quercus lobata HOM05D000051 ORTHO05D000015 2.8e-06 56.2 57 49.1
SEGI_41555 Sequoiadendron giganteum HOM05D000312 ORTHO05D000221 2.8e-06 56.2 60 53.3
BcaB05g22267 Brassica carinata HOM05D000051 ORTHO05D000015 3.7e-06 55.8 77 41.6
Dinv03144 Davidia involucrata HOM05D000051 ORTHO05D000843 3.7e-06 55.8 56 51.8
Gorai.002G085000 Gossypium raimondii HOM05D000051 ORTHO05D000015 3.7e-06 55.8 50 52.0
HanXRQChr17g0536881 Helianthus annuus HOM05D001243 ORTHO05D000843 3.7e-06 55.8 52 53.8
Potri.015G002001 Populus trichocarpa HOM05D001243 ORTHO05D000843 3.7e-06 55.8 82 39.0
QL05p074536 Quercus lobata HOM05D000051 ORTHO05D000015 3.7e-06 55.8 57 49.1
SEGI_39549 Sequoiadendron giganteum HOM05D000312 ORTHO05D000221 3.7e-06 55.8 88 40.9
AT2G04230 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.9e-06 55.5 48 56.2
AT4G10400 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.9e-06 55.5 81 40.7
BNapus_Darmor_BZH_scaffold_38p00550 Brassica napus HOM05D000051 ORTHO05D000015 4.9e-06 55.5 78 42.3
HanXRQChr10g0318771 Helianthus annuus HOM05D001243 ORTHO05D000843 4.9e-06 55.5 55 52.7
HanXRQChr17g0536961 Helianthus annuus HOM05D001243 ORTHO05D000843 4.9e-06 55.5 55 52.7
Lsat_1_v5_gn_1_80360 Lactuca sativa HOM05D000312 ORTHO05D000221 4.9e-06 55.5 63 44.4
Sabra15G0001300 Salix brachista HOM05D001243 ORTHO05D000843 4.9e-06 55.5 45 57.8
SEGI_28472 Sequoiadendron giganteum HOM05D013007 ORTHO05D000221 4.9e-06 55.5 74 47.3
AL5G28950 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.3e-06 55.1 95 38.9
Carub.0005s1522 Capsella rubella HOM05D000051 ORTHO05D000015 6.3e-06 55.1 48 56.2
ECA246G4300 Erigeron canadensis HOM05D001243 ORTHO05D000843 6.3e-06 55.1 51 51.0
Gohir.A01G077700 Gossypium hirsutum HOM05D000051 ORTHO05D000015 6.3e-06 55.1 68 44.1
HanXRQChr17g0536611 Helianthus annuus HOM05D001243 ORTHO05D000843 6.3e-06 55.1 66 43.9
HanXRQChr17g0536741 Helianthus annuus HOM05D001243 ORTHO05D000843 6.3e-06 55.1 57 45.6
Lsat_1_v5_gn_1_81201 Lactuca sativa HOM05D000312 ORTHO05D000221 6.3e-06 55.1 61 44.3
Lsat_1_v5_gn_3_65701 Lactuca sativa HOM05D001243 ORTHO05D000843 6.3e-06 55.1 55 50.9
Lj3g0021941 Lotus japonicus HOM05D000051 ORTHO05D000015 6.3e-06 55.1 46 52.2
PSO063G0158 Papaver somniferum HOM05D000051 ORTHO05D000015 6.3e-06 55.1 58 39.7
PSO675G2026 Papaver somniferum HOM05D000051 ORTHO05D000015 6.3e-06 55.1 65 44.6
HPP92_017621 Vanilla planifolia HOM05D000576 ORTHO05D000368 6.3e-06 55.1 60 50.0
BcaNung05959 Brassica carinata HOM05D000051 ORTHO05D000015 8.3e-06 54.7 118 35.6
AUR62015679 Chenopodium quinoa HOM05D000051 ORTHO05D000015 8.3e-06 54.7 45 60.0
Migut.I01047 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.3e-06 54.7 61 44.3
Migut.I01059 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.3e-06 54.7 43 53.5
Migut.M00842 Erythranthe guttata HOM05D000051 ORTHO05D000015 8.3e-06 54.7 58 44.8
Migut.O00221 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.3e-06 54.7 45 55.6
Thhalv10028269m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 8.3e-06 54.7 77 39.0
FAN14G5717 Fragaria x ananassa HOM05D000576 ORTHO05D000368 8.3e-06 54.7 55 56.4
HanXRQChr11g0329211 Helianthus annuus HOM05D001243 ORTHO05D000843 8.3e-06 54.7 49 53.1
HanXRQChr17g0536901 Helianthus annuus HOM05D001243 ORTHO05D000843 8.3e-06 54.7 60 48.3
HanXRQChr17g0537001 Helianthus annuus HOM05D001243 ORTHO05D000843 8.3e-06 54.7 52 53.8
Nn1g07083 Nelumbo nucifera HOM05D000576 ORTHO05D003312 8.3e-06 54.7 79 36.7
Rhsim13G0172500 Rhododendron simsii HOM05D000051 ORTHO05D000493 8.3e-06 54.7 106 34.0
Rhsim13G0173000 Rhododendron simsii HOM05D001396 ORTHO05D000493 8.3e-06 54.7 93 39.8
TWI18G0117 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 8.3e-06 54.7 76 40.8
TWI23G0786 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 8.3e-06 54.7 60 50.0


User provided reference genes

Program Settings