Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 1.9e-75 285.8 147 100.0
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 1.3e-55 219.9 138 79.0
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 5.3e-54 214.5 135 78.5
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 1.5e-53 213.0 137 76.6
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 2.6e-53 212.2 139 74.1
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 3.4e-53 211.8 136 75.7
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 7.7e-53 210.7 137 74.5
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 7.7e-53 210.7 137 73.7
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 7.7e-53 210.7 136 75.0
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 1.3e-52 209.9 137 75.2
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 1.7e-52 209.5 137 75.9
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 2.9e-52 208.8 137 74.5
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 2.9e-52 208.8 137 75.2
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 3.8e-52 208.4 138 73.2
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 3.8e-52 208.4 137 75.2
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 3.8e-52 208.4 137 73.0
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 5.0e-52 208.0 136 73.5
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 5.0e-52 208.0 135 74.8
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 5.0e-52 208.0 146 70.5
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 5.0e-52 208.0 138 74.6
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 6.5e-52 207.6 136 75.0
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 1.4e-51 206.5 137 73.7
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 1.9e-51 206.1 146 69.9
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.2e-51 205.3 134 74.6
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 3.2e-51 205.3 134 74.6
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 3.2e-51 205.3 136 75.7
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 4.2e-51 204.9 137 70.8
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 4.2e-51 204.9 135 73.3
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 4.2e-51 204.9 135 72.6
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 5.5e-51 204.5 144 70.1
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 5.5e-51 204.5 145 67.6
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 7.2e-51 204.1 137 71.5
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 7.2e-51 204.1 136 73.5
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 7.2e-51 204.1 146 70.5
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 9.4e-51 203.8 137 71.5
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 9.4e-51 203.8 135 72.6
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 1.2e-50 203.4 144 69.4
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 1.6e-50 203.0 137 71.5
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 1.6e-50 203.0 137 70.8
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 2.1e-50 202.6 137 70.8
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.7e-50 202.2 135 74.1
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 2.7e-50 202.2 135 74.1
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 2.7e-50 202.2 137 72.3
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 2.7e-50 202.2 135 71.9
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 3.6e-50 201.8 137 70.1
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 3.6e-50 201.8 137 70.1
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 4.7e-50 201.4 136 74.3
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 6.1e-50 201.1 137 70.1
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 1.0e-49 200.3 136 71.3
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 1.4e-49 199.9 137 71.5
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 1.4e-49 199.9 133 73.7
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 1.8e-49 199.5 135 71.9
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 2.3e-49 199.1 136 72.1
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.3e-49 199.1 136 72.1
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 8.8e-49 197.2 136 71.3
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 8.8e-49 197.2 137 69.3
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 8.8e-49 197.2 136 71.3
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 1.1e-48 196.8 136 72.8
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 1.1e-48 196.8 149 66.4
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 2.0e-48 196.1 146 65.8
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 5.7e-48 194.5 145 65.5
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 6.3e-47 191.0 139 69.1
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.4e-46 189.9 144 64.6
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 2.4e-46 189.1 136 64.7
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.2e-45 186.8 152 62.5
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 2.0e-45 186.0 135 68.9
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 2.6e-45 185.7 126 70.6
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 4.5e-45 184.9 137 67.2
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 1.0e-44 183.7 123 73.2
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 5.0e-44 181.4 136 67.6
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 6.5e-44 181.0 123 70.7
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 8.5e-44 180.6 136 67.6
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 2.5e-43 179.1 146 63.0
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 3.2e-43 178.7 133 67.7
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 9.4e-43 177.2 136 66.2
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 9.4e-43 177.2 137 66.4
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 1.2e-42 176.8 134 67.2
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.6e-42 176.4 134 67.9
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 6.1e-42 174.5 133 65.4
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 3.9e-41 171.8 151 57.0
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 3.9e-41 171.8 146 57.5
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 5.7e-40 167.9 184 52.7
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 3.7e-39 165.2 142 55.6
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 1.4e-38 163.3 105 76.2
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 1.8e-38 162.9 150 57.3
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 7.0e-38 161.0 147 58.5
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 2.0e-37 159.5 103 72.8
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.2e-36 156.0 123 65.0
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 2.9e-36 155.6 124 63.7
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 8.5e-36 154.1 138 55.8
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 1.9e-35 152.9 138 55.1
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 1.9e-35 152.9 137 56.2
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 2.5e-35 152.5 140 54.3
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 7.2e-35 151.0 132 56.8
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 7.2e-35 151.0 103 69.9
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 9.4e-35 150.6 129 58.1
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 9.4e-35 150.6 129 58.1
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 9.4e-35 150.6 138 54.3
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 1.2e-34 150.2 132 56.1
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 1.2e-34 150.2 138 53.6
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 1.6e-34 149.8 138 53.6
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 2.1e-34 149.4 129 57.4
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 2.3e-33 146.0 129 56.6
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 2.3e-33 146.0 129 56.6
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 3.7e-31 138.7 134 56.7
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 4.1e-30 135.2 110 63.6
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 2.2e-28 129.4 111 57.7
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 3.2e-27 125.6 137 50.4
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 4.2e-27 125.2 110 58.2
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 3.6e-26 122.1 135 48.9
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 5.2e-25 118.2 81 71.6
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 2.8e-23 112.5 68 79.4
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.0e-21 106.3 141 46.8
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 6.6e-20 101.3 65 72.3
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 5.9e-13 78.2 89 48.3
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 7.8e-13 77.8 63 58.7
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 4.0e-09 65.5 143 32.2
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 6.8e-09 64.7 105 39.0
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 7.5e-08 61.2 50 62.0


User provided reference genes

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