Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41081 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 9.7e-63 243.4 134 100.0
SEGI_06703 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 6.8e-56 220.7 134 89.6
SEGI_37700 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.7e-51 206.1 125 86.4
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 6.3e-46 187.6 131 74.0
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 2.4e-45 185.7 130 73.1
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 2.4e-45 185.7 130 73.1
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 5.4e-45 184.5 121 77.7
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 1.6e-44 183.0 130 72.3
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 7.7e-44 180.6 124 74.2
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 1.7e-43 179.5 124 73.4
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 1.7e-43 179.5 128 73.4
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 3.8e-43 178.3 129 72.9
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 3.8e-43 178.3 125 69.6
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 3.8e-43 178.3 135 69.6
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 6.6e-43 177.6 129 71.3
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 1.5e-42 176.4 119 74.8
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 1.5e-42 176.4 121 74.4
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 1.5e-42 176.4 119 74.8
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 1.9e-42 176.0 131 73.3
Solyc05g012340.4 Solanum lycopersicum HOM05D001391 ORTHO05D005432 1.9e-42 176.0 123 74.0
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 1.9e-42 176.0 123 74.0
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 2.5e-42 175.6 125 72.0
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 3.3e-42 175.3 129 69.8
Rhsim12G0074900 Rhododendron simsii HOM05D001391 ORTHO05D005432 3.3e-42 175.3 131 67.9
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 3.3e-42 175.3 129 69.0
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 7.2e-42 174.1 133 65.4
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 7.2e-42 174.1 133 67.7
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 7.2e-42 174.1 119 73.9
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 9.5e-42 173.7 125 70.4
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 1.2e-41 173.3 134 69.4
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 1.2e-41 173.3 119 73.1
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 1.2e-41 173.3 123 69.9
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 1.2e-41 173.3 119 74.8
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 1.2e-41 173.3 129 69.8
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 1.6e-41 172.9 121 71.1
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 2.1e-41 172.6 126 71.4
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 2.1e-41 172.6 119 73.1
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 3.6e-41 171.8 119 73.1
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 3.6e-41 171.8 134 67.9
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 3.6e-41 171.8 119 73.1
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 4.7e-41 171.4 129 67.4
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 4.7e-41 171.4 132 67.4
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 4.7e-41 171.4 125 67.2
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 4.7e-41 171.4 120 73.3
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 6.1e-41 171.0 121 71.9
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 8.0e-41 170.6 133 64.7
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 8.0e-41 170.6 128 68.0
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 8.0e-41 170.6 118 75.4
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 8.0e-41 170.6 133 64.7
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 1.0e-40 170.2 133 64.7
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 1.4e-40 169.9 119 72.3
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.8e-40 169.5 129 66.7
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.8e-40 169.5 129 66.7
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 1.8e-40 169.5 133 64.7
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 1.8e-40 169.5 119 70.6
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 1.8e-40 169.5 129 65.9
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 1.8e-40 169.5 125 66.4
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 2.3e-40 169.1 126 69.8
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 2.3e-40 169.1 130 68.5
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 2.3e-40 169.1 128 68.0
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 2.3e-40 169.1 129 65.1
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 3.0e-40 168.7 136 65.4
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 3.0e-40 168.7 119 74.8
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 4.0e-40 168.3 129 65.1
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 4.0e-40 168.3 129 65.1
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 4.0e-40 168.3 129 65.1
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 4.0e-40 168.3 129 64.3
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 5.2e-40 167.9 132 64.4
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 5.2e-40 167.9 128 66.4
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 5.2e-40 167.9 119 70.6
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 6.8e-40 167.5 131 67.2
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 8.9e-40 167.2 133 63.9
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 8.9e-40 167.2 130 68.5
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 8.9e-40 167.2 129 64.3
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 8.9e-40 167.2 129 64.3
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 1.5e-39 166.4 129 65.9
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 2.0e-39 166.0 129 65.9
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 2.0e-39 166.0 129 65.9
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 2.0e-39 166.0 129 65.9
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 2.0e-39 166.0 129 65.9
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 2.0e-39 166.0 129 65.9
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 2.0e-39 166.0 121 67.8
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 2.0e-39 166.0 129 66.7
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 2.0e-39 166.0 119 75.6
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 4.4e-39 164.9 129 65.1
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 4.4e-39 164.9 129 65.1
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 4.4e-39 164.9 129 65.1
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 4.4e-39 164.9 131 64.9
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 4.4e-39 164.9 119 70.6
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 4.4e-39 164.9 119 70.6
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 4.4e-39 164.9 133 63.2
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 5.7e-39 164.5 131 64.9
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 5.7e-39 164.5 129 63.6
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 7.5e-39 164.1 128 68.8
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 7.5e-39 164.1 129 65.1
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 9.8e-39 163.7 119 67.2
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 1.3e-38 163.3 131 64.1
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 1.3e-38 163.3 129 65.1
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 1.3e-38 163.3 132 65.2
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 2.2e-38 162.5 133 60.2
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 3.7e-38 161.8 128 64.8
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 1.4e-37 159.8 126 65.9
HanXRQChr08g0223901 Helianthus annuus HOM05D001391 ORTHO05D005432 2.4e-37 159.1 119 68.1
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 4.1e-37 158.3 118 69.5
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 7.0e-37 157.5 131 66.4
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 7.0e-37 157.5 129 64.3
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 3.5e-36 155.2 122 68.0
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 4.6e-36 154.8 145 58.6
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 1.0e-35 153.7 118 71.2
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 1.0e-35 153.7 119 68.1
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 2.9e-35 152.1 119 66.4
CSS0036366 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 5.0e-35 151.4 125 65.6
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 1.1e-34 150.2 101 75.2
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 5.6e-34 147.9 118 66.9
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 9.5e-34 147.1 126 61.9
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 1.6e-33 146.4 104 72.1
Gorai.008G177300 Gossypium raimondii HOM05D001391 ORTHO05D005432 1.6e-33 146.4 118 66.1
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.6e-33 146.4 155 56.8
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 2.1e-33 146.0 104 73.1
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 3.6e-33 145.2 120 65.8
Gohir.D12G164650 Gossypium hirsutum HOM05D001391 ORTHO05D005432 4.7e-33 144.8 118 66.1
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 4.7e-33 144.8 126 61.1
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 1.0e-32 143.7 105 69.5
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 1.0e-32 143.7 108 69.4
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 1.4e-32 143.3 107 67.3
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 1.7e-30 136.3 125 60.0
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 4.9e-30 134.8 105 69.5
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 1.4e-29 133.3 104 66.3
Hund25180 Selenicereus undatus HOM05D001391 ORTHO05D005432 2.4e-29 132.5 87 73.6
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 4.6e-28 128.3 104 69.2
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 6.0e-28 127.9 105 62.9
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 7.8e-28 127.5 118 61.9
SEGI_28419 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 9.5e-26 120.6 86 70.9
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 1.2e-25 120.2 101 67.3
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 5.2e-24 114.8 90 65.6
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 5.2e-24 114.8 90 65.6
Gohir.A13G082366 Gossypium hirsutum HOM05D001391 ORTHO05D005432 1.9e-21 106.3 88 60.2
ClCG08G010360 Citrullus lanatus HOM05D001391 ORTHO05D005432 1.8e-16 89.7 68 69.1
Phvul.002G102100 Phaseolus vulgaris HOM05D001391 ORTHO05D005432 5.2e-16 88.2 72 62.5
Dinv16729 Davidia involucrata HOM05D001391 ORTHO05D005432 2.9e-14 82.4 68 66.2
BcaB07g30295 Brassica carinata HOM05D001391 ORTHO05D005432 3.0e-11 72.4 68 57.4
QL01p050911 Quercus lobata HOM05D001391 ORTHO05D005432 6.6e-11 71.2 68 54.4
Sc11g0002420 Simmondsia chinensis HOM05D001391 ORTHO05D005432 2.8e-09 65.9 68 55.9
QL03p071882 Quercus lobata HOM05D001391 ORTHO05D005432 4.9e-06 55.1 68 48.5


User provided reference genes

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