Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41047 Sequoiadendron giganteum HOM05D005021 ORTHO05D006824 3.0e-193 678.3 342 100.0
ATR0752G031 Amborella trichopoda HOM05D005021 ORTHO05D006824 7.0e-41 172.2 146 58.9
CDE05G3601 Ceratophyllum demersum HOM05D005021 ORTHO05D006824 1.6e-40 171.0 150 57.3
HPP92_017178 Vanilla planifolia HOM05D005021 ORTHO05D006824 2.3e-39 167.2 153 55.6
TAR626G1325 Trochodendron aralioides HOM05D005021 ORTHO05D006824 1.9e-38 164.1 153 53.6
Aqoxy1G01424 Aquilegia oxysepala HOM05D005021 ORTHO05D006824 2.1e-37 160.6 150 50.7
Nn7g38248 Nelumbo nucifera HOM05D005021 ORTHO05D006824 4.0e-36 156.4 152 52.6
GSVIVG01012103001 Vitis vinifera HOM05D005021 ORTHO05D006824 5.2e-36 156.0 158 51.9
RcHm_v2.0_Chr5g0020301 Rosa chinensis HOM05D005021 ORTHO05D006824 6.8e-36 155.6 158 51.9
Phvul.002G097500 Phaseolus vulgaris HOM05D005021 ORTHO05D006824 8.9e-36 155.2 164 51.2
Os08g0544500 Oryza sativa ssp. japonica HOM05D005021 ORTHO05D006824 2.0e-35 154.1 143 52.4
arahy.Tifrunner.gnm1.ann1.59QZXR Arachis hypogaea HOM05D005021 ORTHO05D006824 2.6e-35 153.7 162 50.6
arahy.Tifrunner.gnm1.ann1.79RC6W Arachis hypogaea HOM05D005021 ORTHO05D006824 2.6e-35 153.7 164 50.0
Ca_18756_v3 Cicer arietinum L. HOM05D005021 ORTHO05D006824 2.6e-35 153.7 156 52.6
TWI38G0923 Tripterygium wilfordii HOM05D005021 ORTHO05D006824 2.6e-35 153.7 157 50.3
FAN16G3288 Fragaria x ananassa HOM05D005021 ORTHO05D006824 3.4e-35 153.3 181 45.3
Psat7g129680 Pisum sativum HOM05D005021 ORTHO05D006824 3.4e-35 153.3 156 53.2
CANSAT35G0082 Cannabis sativa HOM05D005021 ORTHO05D006824 4.4e-35 152.9 160 50.6
COL.COLO4_17653 Corchorus olitorius HOM05D005021 ORTHO05D006824 4.4e-35 152.9 152 52.6
Thecc.02G008800 Theobroma cacao HOM05D005021 ORTHO05D006824 4.4e-35 152.9 153 51.6
CSS0004737 Camellia sinensis var. sinensis HOM05D005021 ORTHO05D006824 7.5e-35 152.1 143 51.0
FAN21G1452 Fragaria x ananassa HOM05D005021 ORTHO05D006824 9.8e-35 151.8 158 49.4
Gohir.D01G132500 Gossypium hirsutum HOM05D005021 ORTHO05D006824 9.8e-35 151.8 152 53.3
Gorai.002G164100 Gossypium raimondii HOM05D005021 ORTHO05D006824 9.8e-35 151.8 152 53.3
Sabra12G0094200 Salix brachista HOM05D005021 ORTHO05D006824 9.8e-35 151.8 160 50.0
TWI38G0776 Tripterygium wilfordii HOM05D005021 ORTHO05D006824 1.3e-34 151.4 150 50.7
Cpa.g.sc30.159 Carica papaya HOM05D005021 ORTHO05D006824 1.7e-34 151.0 158 50.6
Medtr4g084140 Medicago truncatula HOM05D005021 ORTHO05D006824 1.7e-34 151.0 158 51.3
Zm00001eb405230 Zea mays HOM05D005021 ORTHO05D006824 2.2e-34 150.6 147 52.4
FvH4_3g12410 Fragaria vesca HOM05D005021 ORTHO05D006824 2.9e-34 150.2 158 49.4
FAN25G1951 Fragaria x ananassa HOM05D005021 ORTHO05D006824 2.9e-34 150.2 158 49.4
Lj4g0005220 Lotus japonicus HOM05D005021 ORTHO05D006824 4.9e-34 149.4 156 50.6
Potri.012G124400 Populus trichocarpa HOM05D005021 ORTHO05D006824 4.9e-34 149.4 160 49.4
Gohir.A01G141263 Gossypium hirsutum HOM05D005021 ORTHO05D006824 6.4e-34 149.1 164 48.8
Glyma.20G019300 Glycine max HOM05D005021 ORTHO05D006824 8.3e-34 148.7 161 49.1
Lalb_Chr16g0385181 Lupinus albus HOM05D005021 ORTHO05D006824 1.4e-33 147.9 162 48.8
TPR.G38288 Trifolium pratense HOM05D005021 ORTHO05D006824 1.4e-33 147.9 156 51.3
MD05G1250500 Malus domestica HOM05D005021 ORTHO05D006824 1.9e-33 147.5 162 47.5
PSO675G8902 Papaver somniferum HOM05D005021 ORTHO05D006824 1.9e-33 147.5 149 51.0
Prupe.4G113100 Prunus persica HOM05D005021 ORTHO05D006824 1.9e-33 147.5 158 48.7
MD10G1231300 Malus domestica HOM05D005021 ORTHO05D006824 3.2e-33 146.7 161 47.8
VMungo0251G3115 Vigna mungo HOM05D005021 ORTHO05D006824 3.2e-33 146.7 164 47.6
Eucgr.D00052 Eucalyptus grandis HOM05D005021 ORTHO05D006824 5.4e-33 146.0 155 47.7
Dinv25918 Davidia involucrata HOM05D005021 ORTHO05D006824 7.0e-33 145.6 158 47.5
Duzib248G0067 Durio zibethinus HOM05D005021 ORTHO05D006824 7.0e-33 145.6 152 49.3
Sp4g17340 Schrenkiella parvula HOM05D005021 ORTHO05D006824 7.0e-33 145.6 153 50.3
Potri.015G124500 Populus trichocarpa HOM05D005021 ORTHO05D006824 9.2e-33 145.2 160 48.1
Carub.0004s1679 Capsella rubella HOM05D005021 ORTHO05D006824 1.2e-32 144.8 152 48.7
AL4G31120 Arabidopsis lyrata HOM05D005021 ORTHO05D006824 2.1e-32 144.1 150 47.3
CiPaw.10G064100 Carya illinoinensis HOM05D005021 ORTHO05D006824 2.1e-32 144.1 144 50.0
ECA238G3003 Erigeron canadensis HOM05D005021 ORTHO05D006824 2.1e-32 144.1 146 49.3
RhsimUnG0043400 Rhododendron simsii HOM05D005021 ORTHO05D006824 2.1e-32 144.1 147 49.7
Lj1A1146G59 Lonicera japonica HOM05D005021 ORTHO05D006824 3.5e-32 143.3 147 49.0
SGA_v2.0_scaffold175G39355 Striga asiatica HOM05D005021 ORTHO05D006824 3.5e-32 143.3 145 49.7
DCAR_003775 Daucus carota HOM05D005021 ORTHO05D006824 4.6e-32 142.9 148 48.0
Atru.chr10.559 Acer truncatum HOM05D005021 ORTHO05D006824 6.0e-32 142.5 159 47.2
Thhalv10016146m.g Eutrema salsugineum HOM05D005021 ORTHO05D006824 6.0e-32 142.5 153 47.7
HanXRQChr14g0447451 Helianthus annuus HOM05D005021 ORTHO05D006824 6.0e-32 142.5 146 48.6
SalBow8G3018 Salvia bowleyana HOM05D005021 ORTHO05D006824 1.0e-31 141.7 149 49.0
vmacro03526 Vaccinium macrocarpon HOM05D005021 ORTHO05D006824 1.0e-31 141.7 147 49.0
Ciclev10014047m.g Citrus clementina HOM05D005021 ORTHO05D006824 1.3e-31 141.4 145 50.3
Migut.M01986 Erythranthe guttata HOM05D005021 ORTHO05D006824 1.3e-31 141.4 157 46.5
AT2G35110 Arabidopsis thaliana HOM05D005021 ORTHO05D006824 1.7e-31 141.0 150 46.0
Hma1.2p1_1005F.1_g246940 Hydrangea macrophylla HOM05D005021 ORTHO05D006824 1.7e-31 141.0 160 46.9
Sopen02g017890 Solanum pennellii HOM05D005021 ORTHO05D006824 1.7e-31 141.0 160 45.0
ClCG01G009560 Citrullus lanatus HOM05D005021 ORTHO05D006824 3.0e-31 140.2 151 48.3
MELO3C021737.2 Cucumis melo HOM05D005021 ORTHO05D006824 3.0e-31 140.2 151 47.0
CsaV3_1G046230 Cucumis sativus L. HOM05D005021 ORTHO05D006824 3.0e-31 140.2 151 47.0
Cfa000703 Carpinus fangiana HOM05D005021 ORTHO05D006824 3.9e-31 139.8 159 45.3
THA.LOC104798554 Tarenaya hassleriana HOM05D005021 ORTHO05D006824 5.1e-31 139.4 152 48.7
Haze_06074 Corylus avellana HOM05D005021 ORTHO05D006824 6.6e-31 139.0 159 45.3
Solyc02g068720.3 Solanum lycopersicum HOM05D005021 ORTHO05D006824 1.5e-30 137.9 160 43.8
QL11p016313 Quercus lobata HOM05D005021 ORTHO05D006824 1.9e-30 137.5 158 48.1
Nitab4.5_0001288g0150 Nicotiana tabacum HOM05D005021 ORTHO05D006824 2.5e-30 137.1 164 43.3
Nitab4.5_0007745g0040 Nicotiana tabacum HOM05D005021 ORTHO05D006824 2.5e-30 137.1 164 43.3
Aa31LG9G16120 Aethionema arabicum HOM05D005021 ORTHO05D006824 4.3e-30 136.3 152 47.4
EL10Ac9g20953 Beta vulgaris HOM05D005021 ORTHO05D006824 4.3e-30 136.3 106 59.4
BcaB02g09480 Brassica carinata HOM05D005021 ORTHO05D006824 5.6e-30 136.0 146 46.6
BolC4t22962H Brassica oleracea HOM05D005021 ORTHO05D006824 5.6e-30 136.0 147 47.6
BraA05t20004Z Brassica rapa HOM05D005021 ORTHO05D006824 7.3e-30 135.6 146 47.3
Oeu060352.1 Olea europaea HOM05D005021 ORTHO05D006824 7.3e-30 135.6 157 42.0
Oeu060353.1 Olea europaea HOM05D005021 ORTHO05D006824 7.3e-30 135.6 157 42.0
Sed0001856 Sechium edule HOM05D005021 ORTHO05D006824 7.3e-30 135.6 146 46.6
A05p10630 Brassica napus HOM05D005021 ORTHO05D006824 9.5e-30 135.2 147 47.6
Ah.01g015830 Amaranthus hybridus HOM05D005021 ORTHO05D006824 1.2e-29 134.8 97 60.8
BcaB02g09478 Brassica carinata HOM05D005021 ORTHO05D006824 1.2e-29 134.8 147 47.6
Cc09_g06010 Coffea canephora HOM05D005021 ORTHO05D006824 2.1e-29 134.0 150 46.0
Hund09140 Selenicereus undatus HOM05D005021 ORTHO05D006824 2.1e-29 134.0 106 56.6
AagrBONN_evm.TU.Sc2ySwM_344.1422 Anthoceros agrestis HOM05D005021 ORTHO05D006824 2.8e-29 133.7 153 43.8
C04p13730 Brassica napus HOM05D005021 ORTHO05D006824 2.8e-29 133.7 147 46.9
AUR62037395 Chenopodium quinoa HOM05D005021 ORTHO05D006824 8.1e-29 132.1 97 59.8
AUR62041742 Chenopodium quinoa HOM05D005021 ORTHO05D006824 2.3e-28 130.6 121 52.1
SMO367G0195 Selaginella moellendorffii HOM05D005021 ORTHO05D006824 3.1e-28 130.2 121 52.9
Pp3c1_6150 Physcomitrium patens HOM05D005021 ORTHO05D006824 5.2e-28 129.4 138 47.1
Mapoly0087s0075 Marchantia polymorpha HOM05D005021 ORTHO05D006824 2.0e-27 127.5 152 46.1
Sc17g0003700 Simmondsia chinensis HOM05D005021 ORTHO05D006824 2.6e-27 127.1 122 50.0
CAN.G149.8 Capsicum annuum HOM05D005021 ORTHO05D006824 4.4e-27 126.3 159 41.5
Pp3c11_1080 Physcomitrium patens HOM05D005021 ORTHO05D006824 1.7e-26 124.4 169 40.8
unitig_748.g8077 Utricularia gibba HOM05D005021 ORTHO05D006824 2.9e-26 123.6 102 51.0
SHI31491 Sapria himalayana HOM05D005021 ORTHO05D006824 8.6e-23 112.1 151 41.1
BcaB07g31175 Brassica carinata HOM05D005021 ORTHO05D006824 1.9e-22 110.9 88 53.4
SGA_v2.0_scaffold88G27325 Striga asiatica HOM05D005021 ORTHO05D006824 1.1e-20 105.1 81 56.8
PGR004G0612 Punica granatum HOM05D005021 ORTHO05D006824 2.5e-14 84.0 143 34.3
CBR_g30692 Chara braunii HOM05D005021 ORTHO05D006824 8.4e-10 68.9 61 47.5
Psat5g003360 Pisum sativum HOM05D005021 ORTHO05D006824 7.8e-08 62.4 90 46.7


User provided reference genes

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