Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_41003 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 0.0e+00 1165.6 609 100.0
SEGI_13637 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 2.5e-267 925.2 498 97.8
SEGI_32990 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 2.5e-267 925.2 498 97.8
SEGI_15283 Sequoiadendron giganteum HOM05D009451 ORTHO05D000681 2.2e-263 912.1 498 95.8
SEGI_17643 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 2.8e-226 788.9 421 98.6
SEGI_31203 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 5.2e-172 608.6 333 94.3
SEGI_40582 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 5.6e-166 588.6 317 95.0
SEGI_27541 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 5.8e-163 578.6 295 95.6
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 3.3e-142 509.6 274 96.4
SEGI_28780 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 1.3e-122 444.5 325 73.5
SEGI_13178 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 4.3e-49 200.3 136 80.1
SEGI_05928 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 1.6e-48 198.4 126 91.3
SEGI_26236 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 4.4e-46 190.3 94 98.9
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 8.4e-37 159.5 292 34.6
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 2.7e-35 154.5 259 34.4
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 5.1e-34 150.2 260 35.4
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 7.4e-33 146.4 260 35.0
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.6e-32 145.2 261 34.9
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 4.8e-32 143.7 341 31.7
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 4.8e-32 143.7 341 31.7
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 4.8e-32 143.7 341 31.7
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 4.8e-32 143.7 341 31.7
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 3.1e-31 141.0 272 33.8
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 6.9e-31 139.8 263 33.8
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 6.9e-31 139.8 263 33.8
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 6.9e-31 139.8 263 33.8
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 4.5e-30 137.1 270 34.1
SEGI_38716 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 4.9e-29 133.7 63 100.0
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 8.4e-29 132.9 173 41.0
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 1.4e-28 132.1 334 29.6
HanXRQChr00c0703g0576901 Helianthus annuus HOM05D001070 ORTHO05D010233 1.9e-28 131.7 147 42.9
HanXRQChr03g0087611 Helianthus annuus HOM05D001070 ORTHO05D010233 1.9e-28 131.7 147 42.9
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 4.2e-28 130.6 236 35.6
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 1.2e-27 129.0 256 31.6
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 2.1e-27 128.3 248 33.5
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 6.0e-27 126.7 248 32.3
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 5.1e-26 123.6 158 40.5
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 5.1e-26 123.6 251 32.3
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 1.1e-25 122.5 244 32.0
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.5e-25 122.1 236 33.9
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 2.1e-24 118.2 117 43.6
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.8e-24 117.9 118 44.9
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 3.7e-24 117.5 228 35.1
Lju5009P0T46 Lonicera japonica HOM05D001070 ORTHO05D010233 8.2e-24 116.3 208 36.1
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 2.4e-23 114.8 161 39.8
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 1.3e-21 109.0 218 34.4
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 2.2e-21 108.2 166 35.5
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 2.9e-21 107.8 335 27.8
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 4.9e-21 107.1 138 40.6
SEGI_27064 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 8.4e-21 106.3 53 90.6
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 1.9e-20 105.1 123 42.3
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 7.1e-20 103.2 165 38.8
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 3.9e-18 97.4 122 41.0
Gohir.A11G193450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 6.7e-18 96.7 104 42.3
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.8e-15 88.6 266 25.2
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 3.8e-13 80.9 88 40.9
HPP92_028417 Vanilla planifolia HOM05D001070 ORTHO05D010233 7.2e-12 76.6 113 36.3
SEGI_33411 Sequoiadendron giganteum HOM05D000743 ORTHO05D000580 7.9e-11 73.2 33 97.0
Gohir.D11G334350 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.8e-10 72.0 101 41.6
SEGI_03169 Sequoiadendron giganteum HOM05D004847 ORTHO05D005856 1.8e-10 72.0 70 60.0
CsaV3_1G025490 Cucumis sativus L. HOM05D001070 ORTHO05D013014 2.3e-10 71.6 71 45.1
Gohir.D04G101450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 3.9e-10 70.9 77 41.6
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 3.9e-10 70.9 103 37.9
Solyc11g021280.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 5.1e-10 70.5 81 44.4
Nn6g34149 Nelumbo nucifera HOM05D001070 ORTHO05D010233 3.3e-09 67.8 78 42.3
Nn029s41578 Nelumbo nucifera HOM05D001070 ORTHO05D010233 5.7e-09 67.0 63 49.2
SGA_v2.0_scaffold893G53699 Striga asiatica HOM05D001070 ORTHO05D010233 1.4e-07 62.4 165 33.3


User provided reference genes

Program Settings