Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40980 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 3.3e-170 601.7 314 100.0
SEGI_12647 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 4.3e-146 521.5 276 98.9
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 6.5e-09 65.9 94 38.3
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 1.1e-08 65.1 102 39.2
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 1.9e-08 64.3 104 37.5
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 3.2e-08 63.5 93 38.7
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 7.2e-08 62.4 98 37.8
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 7.2e-08 62.4 114 36.8
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 9.4e-08 62.0 104 40.4
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 9.4e-08 62.0 100 38.0
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 9.4e-08 62.0 106 36.8
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 1.2e-07 61.6 102 36.3
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 1.2e-07 61.6 95 37.9
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 1.2e-07 61.6 104 39.4
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 1.2e-07 61.6 88 42.0
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 1.6e-07 61.2 103 36.9
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 2.1e-07 60.8 96 39.6
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 2.7e-07 60.5 96 39.6
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 4.7e-07 59.7 100 36.0
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 8.0e-07 58.9 103 38.8
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 2.3e-06 57.4 103 35.0
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 2.3e-06 57.4 102 38.2
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 2.3e-06 57.4 110 30.9
Prupe.7G188200 Prunus persica HOM05D008614 ORTHO05D010420 4.0e-06 56.6 103 36.9
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 4.0e-06 56.6 110 32.7
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 5.2e-06 56.2 111 36.9
FAN19G2600 Fragaria x ananassa HOM05D008614 ORTHO05D010420 6.7e-06 55.8 104 33.7
FAN23G2016 Fragaria x ananassa HOM05D008614 ORTHO05D010420 6.7e-06 55.8 104 33.7
FAN26G1944 Fragaria x ananassa HOM05D008614 ORTHO05D010420 6.7e-06 55.8 104 33.7
Zm00001eb033200 Zea mays HOM05D064474 ORTHO05D009511 6.7e-06 55.8 106 32.1
Dinv28956 Davidia involucrata HOM05D000381 ORTHO05D010112 8.8e-06 55.5 112 30.4
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 8.8e-06 55.5 103 36.9
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 8.8e-06 55.5 196 27.0


User provided reference genes

Program Settings