Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40729 Sequoiadendron giganteum HOM05D005213 ORTHO05D006229 0.0e+00 1303.9 675 100.0
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 3.0e-19 101.3 397 30.7
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 1.1e-18 99.4 397 29.2
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 4.3e-18 97.4 420 29.8
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 2.8e-17 94.7 431 29.9
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 4.8e-17 94.0 390 28.7
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 6.3e-17 93.6 418 28.9
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 8.2e-17 93.2 424 26.7
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 1.4e-16 92.4 413 29.1
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 1.4e-16 92.4 467 27.6
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 2.4e-16 91.7 493 27.6
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 2.4e-16 91.7 424 27.1
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 2.4e-16 91.7 415 28.4
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 4.1e-16 90.9 424 27.1
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 6.9e-16 90.1 408 27.9
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 1.5e-15 89.0 477 26.6
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 1.5e-15 89.0 405 27.9
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 4.5e-15 87.4 416 28.6
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 4.5e-15 87.4 438 28.3
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 4.5e-15 87.4 419 28.9
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 5.9e-15 87.0 417 26.6
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 7.7e-15 86.7 392 30.1
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 1.7e-14 85.5 398 29.4
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 2.9e-14 84.7 387 28.4
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 2.9e-14 84.7 423 26.7
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 2.9e-14 84.7 441 27.7
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 2.9e-14 84.7 479 26.5
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 8.5e-14 83.2 399 27.3
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 1.9e-13 82.0 393 26.0
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 1.9e-13 82.0 395 28.1
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 4.2e-13 80.9 448 28.8
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 5.5e-13 80.5 414 27.8
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 9.4e-13 79.7 402 26.1
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 2.7e-12 78.2 387 27.9
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 4.7e-12 77.4 386 27.5
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 6.1e-12 77.0 364 28.6
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 7.9e-12 76.6 404 26.7
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 1.0e-11 76.3 392 27.6
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 1.8e-11 75.5 412 26.9
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 3.9e-11 74.3 524 25.2
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 3.9e-11 74.3 392 25.0
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 5.1e-11 73.9 319 27.0
Sopen08g021200 Solanum pennellii HOM05D005213 ORTHO05D006229 6.7e-11 73.6 98 41.8
SEGI_36054 Sequoiadendron giganteum HOM05D011039 ORTHO05D000001 1.1e-10 72.8 120 45.0
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 1.1e-10 72.8 52 61.5
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 2.0e-10 72.0 393 27.0
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 2.0e-10 72.0 462 26.4
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 2.0e-10 72.0 412 27.2
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 2.0e-10 72.0 406 26.6
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 3.3e-10 71.2 402 26.9
Gohir.A05G037666 Gossypium hirsutum HOM05D005213 ORTHO05D006229 3.3e-10 71.2 43 72.1
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 4.4e-10 70.9 404 27.2
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 7.4e-10 70.1 143 39.2
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 7.4e-10 70.1 97 39.2
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 7.4e-10 70.1 320 26.9
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 9.7e-10 69.7 402 26.1
Actinidia26432 Actinidia chinensis HOM05D005213 ORTHO05D006229 1.7e-09 68.9 56 55.4
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 2.2e-09 68.6 393 26.0
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 2.2e-09 68.6 44 65.9
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 2.8e-09 68.2 305 26.9
MSTRG.11768 Avicennia marina HOM05D005213 ORTHO05D006229 8.2e-09 66.6 118 35.6
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 8.2e-09 66.6 387 25.6
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 8.2e-09 66.6 391 26.9
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 1.1e-08 66.2 391 26.3
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 1.4e-08 65.9 413 26.2
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 5.3e-08 63.9 391 24.6
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 9.1e-08 63.2 467 24.4
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 1.5e-07 62.4 74 43.2
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.5e-07 62.4 392 26.3
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 2.6e-07 61.6 409 25.4
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 3.4e-07 61.2 390 24.4
SMO119G0280 Selaginella moellendorffii HOM05D000463 ORTHO05D378385 4.5e-07 60.8 65 49.2
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 5.9e-07 60.5 124 38.7
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 7.7e-07 60.1 394 24.1
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 7.7e-07 60.1 412 25.2
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 1.0e-06 59.7 40 60.0
Phvul.001G044200 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.0e-06 59.7 74 43.2
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 1.3e-06 59.3 382 27.0
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 1.3e-06 59.3 311 27.3
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 1.7e-06 58.9 399 24.8
Phvul.001G044400 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 1.7e-06 58.9 80 41.2
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 2.2e-06 58.5 82 40.2
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 2.2e-06 58.5 49 51.0
SEGI_38826 Sequoiadendron giganteum HOM05D011039 ORTHO05D000001 2.9e-06 58.2 78 47.4
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 5.0e-06 57.4 313 24.6
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 6.5e-06 57.0 159 35.2
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 8.5e-06 56.6 124 38.7


User provided reference genes

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