Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40726 Sequoiadendron giganteum HOM05D005983 ORTHO05D007438 1.5e-107 392.9 204 100.0
Aqoxy5G03845 Aquilegia oxysepala HOM05D005983 ORTHO05D007438 6.1e-24 115.2 107 55.1
ATR0317G025 Amborella trichopoda HOM05D005983 ORTHO05D007438 1.0e-23 114.4 94 59.6
TWI15G0813 Tripterygium wilfordii HOM05D005983 ORTHO05D007438 1.8e-23 113.6 96 59.4
Sc01g0008340 Simmondsia chinensis HOM05D005983 ORTHO05D007438 8.8e-23 111.3 78 64.1
Duzib205G1394 Durio zibethinus HOM05D005983 ORTHO05D007438 1.1e-22 110.9 97 59.8
Nn1g00952 Nelumbo nucifera HOM05D005983 ORTHO05D007438 1.1e-22 110.9 78 66.7
MBI04_g09520_MAGBIO Magnolia biondii HOM05D005983 ORTHO05D007438 1.5e-22 110.5 95 55.8
Atru.chr9.1290 Acer truncatum HOM05D005983 ORTHO05D007438 2.0e-22 110.2 83 63.9
Cpa.g.sc29.178 Carica papaya HOM05D005983 ORTHO05D007438 2.0e-22 110.2 96 57.3
arahy.Tifrunner.gnm1.ann1.0NSC2B Arachis hypogaea HOM05D005983 ORTHO05D007438 2.6e-22 109.8 102 52.9
arahy.Tifrunner.gnm1.ann1.NE97L5 Arachis hypogaea HOM05D005983 ORTHO05D007438 2.6e-22 109.8 102 52.9
Gohir.D03G163500 Gossypium hirsutum HOM05D005983 ORTHO05D007438 2.6e-22 109.8 104 55.8
Rhsim01G0100800 Rhododendron simsii HOM05D005983 ORTHO05D007438 2.6e-22 109.8 116 50.0
Hma1.2p1_0316F.1_g122960 Hydrangea macrophylla HOM05D005983 ORTHO05D007438 3.3e-22 109.4 98 56.1
QL12p011684 Quercus lobata HOM05D005983 ORTHO05D007438 3.3e-22 109.4 92 57.6
Duzib084G0278 Durio zibethinus HOM05D005983 ORTHO05D007438 4.4e-22 109.0 79 67.1
GSVIVG01004724001 Vitis vinifera HOM05D005983 ORTHO05D007438 4.4e-22 109.0 93 58.1
COL.COLO4_37146 Corchorus olitorius HOM05D005983 ORTHO05D007438 5.7e-22 108.6 84 64.3
Migut.A01119 Erythranthe guttata HOM05D005983 ORTHO05D007438 5.7e-22 108.6 105 53.3
Gorai.003G172200 Gossypium raimondii HOM05D005983 ORTHO05D007438 5.7e-22 108.6 102 55.9
TAR713G0001 Trochodendron aralioides HOM05D005983 ORTHO05D007438 5.7e-22 108.6 107 52.3
MD06G1055900 Malus domestica HOM05D005983 ORTHO05D007438 7.4e-22 108.2 102 55.9
SalBow6G6019 Salvia bowleyana HOM05D005983 ORTHO05D007438 7.4e-22 108.2 81 61.7
CDE04G0678 Ceratophyllum demersum HOM05D005983 ORTHO05D007438 1.3e-21 107.5 86 60.5
PGR042G2168 Punica granatum HOM05D005983 ORTHO05D007438 1.7e-21 107.1 108 55.6
CiPaw.11G080800 Carya illinoinensis HOM05D005983 ORTHO05D007438 2.8e-21 106.3 90 55.6
Eucgr.E00410 Eucalyptus grandis HOM05D005983 ORTHO05D007438 2.8e-21 106.3 90 55.6
Prupe.5G066800 Prunus persica HOM05D005983 ORTHO05D007438 3.7e-21 105.9 106 52.8
Haze_01067 Corylus avellana HOM05D005983 ORTHO05D007438 4.8e-21 105.5 82 61.0
Glyma.01G207800 Glycine max HOM05D005983 ORTHO05D007438 4.8e-21 105.5 81 61.7
CANSAT21G0098 Cannabis sativa HOM05D005983 ORTHO05D007438 6.3e-21 105.1 84 57.1
MELO3C005523.2 Cucumis melo HOM05D005983 ORTHO05D007438 8.2e-21 104.8 106 50.0
Gohir.A03G007500 Gossypium hirsutum HOM05D005983 ORTHO05D007438 8.2e-21 104.8 102 54.9
Hund14571 Selenicereus undatus HOM05D005983 ORTHO05D007438 8.2e-21 104.8 95 54.7
VMungo1215G0088 Vigna mungo HOM05D005983 ORTHO05D007438 1.1e-20 104.4 94 55.3
Ciclev10020120m.g Citrus clementina HOM05D005983 ORTHO05D007438 1.4e-20 104.0 82 61.0
FAN04G1995 Fragaria x ananassa HOM05D005983 ORTHO05D007438 1.4e-20 104.0 108 51.9
Actinidia02145 Actinidia chinensis HOM05D005983 ORTHO05D007438 1.8e-20 103.6 81 61.7
ClCG01G004150 Citrullus lanatus HOM05D005983 ORTHO05D007438 2.4e-20 103.2 95 52.6
BcaNung00159 Brassica carinata HOM05D005983 ORTHO05D007438 3.1e-20 102.8 121 45.5
FvH4_5g19150 Fragaria vesca HOM05D005983 ORTHO05D007438 3.1e-20 102.8 108 50.9
FAN18G0274 Fragaria x ananassa HOM05D005983 ORTHO05D007438 3.1e-20 102.8 108 50.9
Sabra03G0048600 Salix brachista HOM05D005983 ORTHO05D007438 4.1e-20 102.4 79 62.0
Sed0010070 Sechium edule HOM05D005983 ORTHO05D007438 4.1e-20 102.4 108 45.4
BcaC09g50403 Brassica carinata HOM05D005983 ORTHO05D007438 5.3e-20 102.1 117 47.0
A01p20580 Brassica napus HOM05D005983 ORTHO05D007438 5.3e-20 102.1 117 47.0
C01p25880 Brassica napus HOM05D005983 ORTHO05D007438 5.3e-20 102.1 117 47.0
BolC1t02533H Brassica oleracea HOM05D005983 ORTHO05D007438 5.3e-20 102.1 117 47.0
BraA01t01986Z Brassica rapa HOM05D005983 ORTHO05D007438 5.3e-20 102.1 117 47.0
CARHR223230 Cardamine hirsuta HOM05D005983 ORTHO05D007438 5.3e-20 102.1 92 56.5
FAN08G1502 Fragaria x ananassa HOM05D005983 ORTHO05D007438 5.3e-20 102.1 108 50.9
Potri.003G078300 Populus trichocarpa HOM05D005983 ORTHO05D007438 5.3e-20 102.1 90 55.6
Lj2A220G37 Lonicera japonica HOM05D005983 ORTHO05D007438 7.0e-20 101.7 66 69.7
Aa31LG2G12890 Aethionema arabicum HOM05D005983 ORTHO05D007438 9.1e-20 101.3 104 48.1
AT4G16700 Arabidopsis thaliana HOM05D005983 ORTHO05D007438 9.1e-20 101.3 69 66.7
SGA_v2.0_scaffold104G30169 Striga asiatica HOM05D005983 ORTHO05D007438 9.1e-20 101.3 81 59.3
AL7G38030 Arabidopsis lyrata HOM05D005983 ORTHO05D007438 1.2e-19 100.9 74 63.5
Lj2g0002324 Lotus japonicus HOM05D005983 ORTHO05D007438 1.2e-19 100.9 96 53.1
Lalb_Chr05g0214371 Lupinus albus HOM05D005983 ORTHO05D007438 1.2e-19 100.9 98 52.0
CSS0015193 Camellia sinensis var. sinensis HOM05D005983 ORTHO05D007438 1.6e-19 100.5 106 50.0
Cc08_g12250 Coffea canephora HOM05D005983 ORTHO05D007438 1.6e-19 100.5 69 66.7
RcHm_v2.0_Chr7g0203641 Rosa chinensis HOM05D005983 ORTHO05D007438 1.6e-19 100.5 110 50.9
unitig_744.g24471 Utricularia gibba HOM05D005983 ORTHO05D007438 1.6e-19 100.5 84 56.0
ECA233G1798 Erigeron canadensis HOM05D005983 ORTHO05D007438 2.0e-19 100.1 69 65.2
Thhalv10025592m.g Eutrema salsugineum HOM05D005983 ORTHO05D007438 2.0e-19 100.1 108 50.9
Phvul.002G057200 Phaseolus vulgaris HOM05D005983 ORTHO05D007438 2.6e-19 99.8 78 56.4
Sed0018188 Sechium edule HOM05D005983 ORTHO05D007438 2.6e-19 99.8 92 48.9
Sp7g15340 Schrenkiella parvula HOM05D005983 ORTHO05D007438 3.5e-19 99.4 98 51.0
Psat2g176840 Pisum sativum HOM05D005983 ORTHO05D007438 4.5e-19 99.0 79 57.0
Thecc.03G249100 Theobroma cacao HOM05D005983 ORTHO05D007438 4.5e-19 99.0 99 55.6
Ah.12g054210 Amaranthus hybridus HOM05D005983 ORTHO05D007438 7.7e-19 98.2 109 43.1
Carub.0007s2469 Capsella rubella HOM05D005983 ORTHO05D007438 1.0e-18 97.8 110 49.1
PGSC0003DMG402011882 Solanum tuberosum HOM05D005983 ORTHO05D007438 1.0e-18 97.8 81 58.0
HanXRQChr16g0510961 Helianthus annuus HOM05D005983 ORTHO05D007438 1.3e-18 97.4 83 57.8
Ca_24588_v3 Cicer arietinum L. HOM05D005983 ORTHO05D007438 1.7e-18 97.1 77 57.1
Lsat_1_v5_gn_6_18021 Lactuca sativa HOM05D005983 ORTHO05D007438 2.2e-18 96.7 76 60.5
Solyc06g060780.4 Solanum lycopersicum HOM05D005983 ORTHO05D007438 2.2e-18 96.7 81 58.0
Sopen06g020900 Solanum pennellii HOM05D005983 ORTHO05D007438 2.2e-18 96.7 81 58.0
vmacro00190 Vaccinium macrocarpon HOM05D005983 ORTHO05D007438 2.2e-18 96.7 95 51.6
TPR.G18111 Trifolium pratense HOM05D005983 ORTHO05D007438 2.9e-18 96.3 80 56.2
Peaxi162Scf01022g00324 Petunia axillaris HOM05D005983 ORTHO05D007438 3.8e-18 95.9 81 59.3
EL10Ac5g12377 Beta vulgaris HOM05D005983 ORTHO05D007438 1.5e-17 94.0 84 50.0
Medtr5g012880 Medicago truncatula HOM05D005983 ORTHO05D007438 1.5e-17 94.0 77 54.5
DCAR_004965 Daucus carota HOM05D005983 ORTHO05D007438 2.5e-17 93.2 94 52.1
SMO351G0559 Selaginella moellendorffii HOM05D005983 ORTHO05D007438 2.5e-17 93.2 65 64.6
CAN.G62.33 Capsicum annuum HOM05D005983 ORTHO05D007438 3.2e-17 92.8 81 55.6
PSO357G0330 Papaver somniferum HOM05D005983 ORTHO05D007438 4.2e-17 92.4 81 55.6
Mapoly0144s0014 Marchantia polymorpha HOM05D005983 ORTHO05D007438 9.4e-17 91.3 89 53.9
Nitab4.5_0000618g0100 Nicotiana tabacum HOM05D005983 ORTHO05D007438 1.6e-16 90.5 111 46.8
Os03g0101900 Oryza sativa ssp. japonica HOM05D005983 ORTHO05D007438 2.1e-16 90.1 87 49.4
PSO170G1657 Papaver somniferum HOM05D005983 ORTHO05D007438 2.1e-16 90.1 81 54.3
Pp3c10_660 Physcomitrium patens HOM05D005983 ORTHO05D007438 3.6e-16 89.4 66 63.6
Manes.01G082200 Manihot esculenta HOM05D005983 ORTHO05D007438 2.6e-14 83.2 55 69.1
CsaV3_5G004310 Cucumis sativus L. HOM05D005983 ORTHO05D007438 9.7e-14 81.3 55 65.5
Dinv21647 Davidia involucrata HOM05D005983 ORTHO05D007438 2.8e-13 79.7 75 53.3
AUR62019966 Chenopodium quinoa HOM05D005983 ORTHO05D007438 1.4e-12 77.4 72 51.4
AUR62007103 Chenopodium quinoa HOM05D005983 ORTHO05D007438 3.1e-12 76.3 72 50.0
Actinidia14414 Actinidia chinensis HOM05D005983 ORTHO05D007438 7.7e-11 71.6 94 42.6
SHI02535 Sapria himalayana HOM05D005983 ORTHO05D007438 2.6e-06 56.6 53 52.8
HPP92_015120 Vanilla planifolia HOM05D005983 ORTHO05D007438 4.4e-06 55.8 41 56.1


User provided reference genes

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