Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40713 Sequoiadendron giganteum HOM05D004702 ORTHO05D005505 8.4e-207 723.4 349 100.0
AagrBONN_evm.TU.Sc2ySwM_228.394 Anthoceros agrestis HOM05D004702 ORTHO05D005505 1.0e-15 88.6 124 40.3
SEGI_36308 Sequoiadendron giganteum HOM05D004702 ORTHO05D005505 5.7e-14 82.8 120 38.3
Pp3c15_17100 Physcomitrium patens HOM05D004702 ORTHO05D005505 7.5e-14 82.4 116 39.7
HanXRQChr10g0286851 Helianthus annuus HOM05D004702 ORTHO05D005505 7.0e-12 75.9 127 33.9
TWI56G0769 Tripterygium wilfordii HOM05D004702 ORTHO05D005505 7.0e-12 75.9 120 34.2
SEGI_03871 Sequoiadendron giganteum HOM05D004702 ORTHO05D005505 1.2e-11 75.1 156 32.1
Lsat_1_v5_gn_1_22040 Lactuca sativa HOM05D004702 ORTHO05D005505 2.7e-11 73.9 120 33.3
Cc10_g04740 Coffea canephora HOM05D004702 ORTHO05D005505 5.9e-11 72.8 129 32.6
ECA232G1346 Erigeron canadensis HOM05D004702 ORTHO05D005505 1.0e-10 72.0 127 36.2
SEGI_05734 Sequoiadendron giganteum HOM05D004702 ORTHO05D005505 1.0e-10 72.0 162 29.6
SEGI_19446 Sequoiadendron giganteum HOM05D004702 ORTHO05D005505 1.0e-10 72.0 161 32.9
ClCG05G020100 Citrullus lanatus HOM05D004702 ORTHO05D005505 1.3e-10 71.6 124 34.7
CBR_g733 Chara braunii HOM05D004702 ORTHO05D005505 1.7e-10 71.2 123 35.8
MSTRG.1063 Avicennia marina HOM05D004702 ORTHO05D005505 2.9e-10 70.5 127 32.3
SEGI_12847 Sequoiadendron giganteum HOM05D004702 ORTHO05D005505 2.9e-10 70.5 115 34.8
Atru.BG.237.p Acer truncatum HOM05D004702 ORTHO05D005505 3.8e-10 70.1 110 32.7
Atru.chr13.733 Acer truncatum HOM05D004702 ORTHO05D005505 3.8e-10 70.1 110 32.7
HanXRQChr04g0103941 Helianthus annuus HOM05D004702 ORTHO05D005505 6.5e-10 69.3 120 32.5
CANSAT25G0849 Cannabis sativa HOM05D004702 ORTHO05D005505 1.1e-09 68.6 110 34.5
CsaV3_4G034620 Cucumis sativus L. HOM05D004702 ORTHO05D005505 1.1e-09 68.6 110 32.7
ECA247G0009 Erigeron canadensis HOM05D004702 ORTHO05D005505 1.1e-09 68.6 120 30.8
Lj4C62G3 Lonicera japonica HOM05D004702 ORTHO05D005505 1.1e-09 68.6 127 30.7
Lj5g0017670 Lotus japonicus HOM05D004702 ORTHO05D005505 1.1e-09 68.6 117 32.5
SGA_v2.0_scaffold14G06974 Striga asiatica HOM05D004702 ORTHO05D005505 1.5e-09 68.2 142 28.9
Eucgr.F00191 Eucalyptus grandis HOM05D004702 ORTHO05D005505 1.9e-09 67.8 130 32.3
Actinidia01089 Actinidia chinensis HOM05D004702 ORTHO05D005505 2.5e-09 67.4 214 27.6
TAR625G0654 Trochodendron aralioides HOM05D004702 ORTHO05D005505 2.5e-09 67.4 122 30.3
MELO3C016778.2 Cucumis melo HOM05D004702 ORTHO05D005505 3.3e-09 67.0 110 32.7
unitig_8.g5031 Utricularia gibba HOM05D004702 ORTHO05D005505 3.3e-09 67.0 122 33.6
Ciclev10001048m.g Citrus clementina HOM05D004702 ORTHO05D005505 4.2e-09 66.6 118 33.1
MD15G1078600 Malus domestica HOM05D004702 ORTHO05D005505 4.2e-09 66.6 110 31.8
Oeu009775.1 Olea europaea HOM05D004702 ORTHO05D005505 4.2e-09 66.6 134 29.1
Prupe.1G431800 Prunus persica HOM05D004702 ORTHO05D005505 4.2e-09 66.6 110 31.8
Aqoxy6G01249 Aquilegia oxysepala HOM05D004702 ORTHO05D005505 5.5e-09 66.2 112 32.1
CAN.G1030.31 Capsicum annuum HOM05D004702 ORTHO05D005505 5.5e-09 66.2 149 28.2
PSO541G5103 Papaver somniferum HOM05D004702 ORTHO05D005505 5.5e-09 66.2 122 32.8
CSS0001222 Camellia sinensis var. sinensis HOM05D004702 ORTHO05D005505 7.2e-09 65.9 117 29.9
PSO675G4695 Papaver somniferum HOM05D004702 ORTHO05D005505 7.2e-09 65.9 122 32.0
Sabra02G0097200 Salix brachista HOM05D004702 ORTHO05D005505 7.2e-09 65.9 110 32.7
Sabra14G0017000 Salix brachista HOM05D004702 ORTHO05D005505 7.2e-09 65.9 110 31.8
GSVIVG01009450001 Vitis vinifera HOM05D004702 ORTHO05D005505 7.2e-09 65.9 110 30.9
Lsat_1_v5_gn_4_127260 Lactuca sativa HOM05D004702 ORTHO05D005505 9.5e-09 65.5 110 30.0
MBI16_g04313_MAGBIO Magnolia biondii HOM05D004702 ORTHO05D005505 1.6e-08 64.7 114 31.6
Sc02g0007400 Simmondsia chinensis HOM05D004702 ORTHO05D005505 1.6e-08 64.7 113 29.2
Actinidia22651 Actinidia chinensis HOM05D004702 ORTHO05D005505 2.1e-08 64.3 128 32.0
SalBow6G2833 Salvia bowleyana HOM05D004702 ORTHO05D005505 2.1e-08 64.3 113 34.5
SalBow6G7027 Salvia bowleyana HOM05D004702 ORTHO05D005505 2.1e-08 64.3 113 34.5
DCAR_019426 Daucus carota HOM05D004702 ORTHO05D005505 2.8e-08 63.9 147 29.3
Dinv35933 Davidia involucrata HOM05D004702 ORTHO05D005505 3.6e-08 63.5 110 30.0
Potri.014G025000 Populus trichocarpa HOM05D004702 ORTHO05D005505 3.6e-08 63.5 110 30.9
CiPaw.15G053800 Carya illinoinensis HOM05D004702 ORTHO05D005505 4.7e-08 63.2 110 30.0
FAN27G2110 Fragaria x ananassa HOM05D004702 ORTHO05D005505 4.7e-08 63.2 110 30.9
RcHm_v2.0_Chr6g0308391 Rosa chinensis HOM05D004702 ORTHO05D005505 4.7e-08 63.2 110 30.9
Sed0014061 Sechium edule HOM05D004702 ORTHO05D005505 4.7e-08 63.2 111 31.5
DCAR_012789 Daucus carota HOM05D004702 ORTHO05D005505 6.1e-08 62.8 101 31.7
FvH4_2g33990 Fragaria vesca HOM05D004702 ORTHO05D005505 8.0e-08 62.4 110 30.9
FAN15G1938 Fragaria x ananassa HOM05D004702 ORTHO05D005505 8.0e-08 62.4 110 30.9
FAN24G1074 Fragaria x ananassa HOM05D004702 ORTHO05D005505 8.0e-08 62.4 110 30.9
HanXRQChr09g0267191 Helianthus annuus HOM05D004702 ORTHO05D005505 8.0e-08 62.4 110 30.9
Nitab4.5_0000287g0020 Nicotiana tabacum HOM05D004702 ORTHO05D005505 8.0e-08 62.4 110 30.0
Nitab4.5_0005129g0020 Nicotiana tabacum HOM05D004702 ORTHO05D005505 8.0e-08 62.4 110 30.0
PGR083G2110 Punica granatum HOM05D004702 ORTHO05D005505 8.0e-08 62.4 112 31.2
HanXRQChr16g0509011 Helianthus annuus HOM05D004702 ORTHO05D005505 1.0e-07 62.0 126 28.6
Nn5g30368 Nelumbo nucifera HOM05D004702 ORTHO05D005505 1.0e-07 62.0 113 32.7
MD08G1095800 Malus domestica HOM05D004702 ORTHO05D005505 1.4e-07 61.6 109 31.2
Haze_18055 Corylus avellana HOM05D004702 ORTHO05D005505 2.3e-07 60.8 111 29.7
HPP92_010365 Vanilla planifolia HOM05D004702 ORTHO05D005505 2.3e-07 60.8 154 26.0
TAR381G0178 Trochodendron aralioides HOM05D004702 ORTHO05D005505 3.0e-07 60.5 110 29.1
Cpa.g.sc21.167 Carica papaya HOM05D004702 ORTHO05D005505 4.0e-07 60.1 153 27.5
Manes.05G176200 Manihot esculenta HOM05D004702 ORTHO05D005505 5.2e-07 59.7 110 29.1
Oeu054792.1 Olea europaea HOM05D004702 ORTHO05D005505 6.8e-07 59.3 134 27.6
FAN20G1472 Fragaria x ananassa HOM05D004702 ORTHO05D005505 8.9e-07 58.9 110 30.9
SMO145G0126 Selaginella moellendorffii HOM05D004702 ORTHO05D005505 1.5e-06 58.2 120 31.7
vmacro21496 Vaccinium macrocarpon HOM05D004702 ORTHO05D005505 2.0e-06 57.8 101 29.7
SGA_v2.0_scaffold197G41020 Striga asiatica HOM05D004702 ORTHO05D005505 7.5e-06 55.8 154 27.3
TPR.G3800 Trifolium pratense HOM05D004702 ORTHO05D005505 7.5e-06 55.8 142 27.5


User provided reference genes

Program Settings