Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 4.4e-59 231.1 117 100.0
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 7.0e-49 197.2 114 81.6
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.6e-48 196.1 114 81.6
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 1.0e-47 193.4 114 82.5
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 1.7e-47 192.6 114 81.6
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 6.5e-47 190.7 112 81.2
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 1.1e-46 189.9 116 77.6
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 1.5e-46 189.5 114 76.3
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 1.9e-46 189.1 112 80.4
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 1.9e-46 189.1 112 81.2
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 1.9e-46 189.1 116 77.6
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 2.5e-46 188.7 112 79.5
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 2.5e-46 188.7 112 80.4
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 3.2e-46 188.3 112 79.5
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 3.2e-46 188.3 112 79.5
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 3.2e-46 188.3 113 79.6
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 4.2e-46 188.0 112 79.5
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 4.2e-46 188.0 112 79.5
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 4.2e-46 188.0 112 80.4
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 4.2e-46 188.0 112 79.5
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 7.2e-46 187.2 112 78.6
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 7.2e-46 187.2 112 79.5
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 9.4e-46 186.8 112 78.6
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 1.2e-45 186.4 112 78.6
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 1.2e-45 186.4 112 78.6
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 1.6e-45 186.0 112 77.7
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 2.1e-45 185.7 112 79.5
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 2.1e-45 185.7 112 78.6
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 2.1e-45 185.7 112 76.8
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 2.7e-45 185.3 114 77.2
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.7e-45 185.3 112 78.6
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.7e-45 185.3 112 78.6
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 2.7e-45 185.3 112 76.8
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 3.6e-45 184.9 114 76.3
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 3.6e-45 184.9 114 76.3
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 3.6e-45 184.9 114 77.2
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 3.6e-45 184.9 112 76.8
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 3.6e-45 184.9 112 77.7
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 3.6e-45 184.9 112 77.7
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 3.6e-45 184.9 112 77.7
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 4.7e-45 184.5 112 75.9
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 4.7e-45 184.5 112 76.8
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 4.7e-45 184.5 112 76.8
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 6.1e-45 184.1 112 75.9
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 6.1e-45 184.1 112 76.8
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 6.1e-45 184.1 112 76.8
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 6.1e-45 184.1 112 78.6
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 6.1e-45 184.1 112 76.8
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 6.1e-45 184.1 112 77.7
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 6.1e-45 184.1 112 77.7
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 6.1e-45 184.1 112 77.7
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 8.0e-45 183.7 112 76.8
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 8.0e-45 183.7 112 76.8
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 1.0e-44 183.3 112 76.8
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 1.0e-44 183.3 112 76.8
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 1.0e-44 183.3 112 75.9
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 1.4e-44 183.0 112 75.0
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.4e-44 183.0 112 78.6
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 1.4e-44 183.0 114 72.8
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 1.4e-44 183.0 112 75.0
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 1.8e-44 182.6 112 75.0
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 1.8e-44 182.6 112 75.0
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 2.3e-44 182.2 112 75.0
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 2.3e-44 182.2 112 75.9
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 2.3e-44 182.2 112 75.9
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 3.0e-44 181.8 112 74.1
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 3.0e-44 181.8 112 75.9
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 4.0e-44 181.4 115 73.9
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 4.0e-44 181.4 112 75.9
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 4.0e-44 181.4 112 75.9
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 4.0e-44 181.4 112 75.9
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 4.0e-44 181.4 119 74.8
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 5.2e-44 181.0 112 74.1
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 5.2e-44 181.0 112 74.1
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 5.2e-44 181.0 124 72.6
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 5.2e-44 181.0 112 75.9
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 6.8e-44 180.6 115 73.9
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 8.8e-44 180.3 112 73.2
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 8.8e-44 180.3 112 73.2
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 8.8e-44 180.3 112 75.0
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 1.2e-43 179.9 112 74.1
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 1.2e-43 179.9 112 74.1
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 1.2e-43 179.9 112 74.1
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 1.2e-43 179.9 112 75.0
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 2.6e-43 178.7 112 74.1
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 4.4e-43 177.9 112 72.3
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 4.4e-43 177.9 119 73.9
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 5.7e-43 177.6 111 73.0
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 5.7e-43 177.6 111 73.0
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 5.7e-43 177.6 111 73.0
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 5.7e-43 177.6 121 71.9
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 5.7e-43 177.6 112 74.1
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 5.7e-43 177.6 104 79.8
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 7.5e-43 177.2 112 74.1
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 9.8e-43 176.8 105 78.1
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 1.3e-42 176.4 111 73.0
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 2.2e-42 175.6 111 76.6
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 2.8e-42 175.3 111 71.2
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 6.3e-42 174.1 139 62.6
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 8.3e-42 173.7 139 63.3
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 8.3e-42 173.7 114 72.8
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.4e-41 172.9 133 65.4
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.4e-41 172.9 133 65.4
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 1.4e-41 172.9 102 79.4
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 7.0e-41 170.6 114 69.3
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 2.9e-39 165.2 112 67.9
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 1.1e-38 163.3 101 76.2
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 1.5e-38 162.9 96 82.3
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 1.8e-36 156.0 94 77.7
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 1.8e-36 156.0 94 77.7
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 1.8e-36 156.0 94 77.7
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 3.0e-36 155.2 112 70.5
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 1.2e-35 153.3 128 61.7
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 1.5e-35 152.9 130 60.8
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 4.4e-35 151.4 107 68.2
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 1.4e-33 146.4 112 61.6
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 1.3e-31 139.8 112 64.3
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 9.5e-30 133.7 189 43.4
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 2.8e-29 132.1 113 56.6
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 6.1e-29 131.0 94 69.1
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.4e-28 129.8 82 74.4
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 1.8e-28 129.4 114 53.5
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 6.8e-28 127.5 71 85.9
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 1.2e-27 126.7 72 81.9
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 1.5e-27 126.3 73 82.2
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 2.0e-27 125.9 71 84.5
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 5.8e-27 124.4 71 83.1
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 2.4e-25 119.0 92 65.2
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 3.5e-24 115.2 71 74.6
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 6.0e-24 114.4 157 46.5
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 5.6e-22 107.8 66 78.8
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 3.1e-20 102.1 112 46.4
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.4e-09 66.6 71 50.7


User provided reference genes

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