Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40634 Sequoiadendron giganteum HOM05D003908 ORTHO05D004488 2.8e-134 481.9 230 100.0
Haze_04363 Corylus avellana HOM05D003908 ORTHO05D004488 3.2e-29 132.9 80 83.8
CDE11G1041 Ceratophyllum demersum HOM05D005443 ORTHO05D004488 5.4e-29 132.1 115 60.0
TAR362G1230 Trochodendron aralioides HOM05D003908 ORTHO05D004488 1.2e-28 131.0 104 67.3
Aqoxy6G02470 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 3.5e-28 129.4 78 83.3
Aqoxy5G00367 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 4.6e-28 129.0 78 82.1
Cfa006421 Carpinus fangiana HOM05D003908 ORTHO05D004488 4.6e-28 129.0 78 83.3
MBI10_g16831_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 6.0e-28 128.6 78 83.3
Ciclev10002833m.g Citrus clementina HOM05D003908 ORTHO05D004488 7.8e-28 128.3 78 80.8
COL.COLO4_06708 Corchorus olitorius HOM05D003908 ORTHO05D004488 7.8e-28 128.3 88 71.6
TAR633G1149 Trochodendron aralioides HOM05D003908 ORTHO05D004488 1.0e-27 127.9 78 82.1
Prupe.5G006500 Prunus persica HOM05D003908 ORTHO05D004488 1.3e-27 127.5 78 82.1
CiPaw.08G123800 Carya illinoinensis HOM05D003908 ORTHO05D004488 1.7e-27 127.1 78 82.1
MBI07_g21062_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 1.7e-27 127.1 78 83.3
ATR0787G044 Amborella trichopoda HOM05D003908 ORTHO05D004488 2.3e-27 126.7 78 80.8
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 3.0e-27 126.3 81 77.8
Duzib106G0327 Durio zibethinus HOM05D003908 ORTHO05D004488 3.0e-27 126.3 78 79.5
Rhsim01G0201300 Rhododendron simsii HOM05D003908 ORTHO05D004488 3.0e-27 126.3 78 80.8
vmacro14877 Vaccinium macrocarpon HOM05D003908 ORTHO05D004488 3.0e-27 126.3 78 80.8
Ah.02g111400 Amaranthus hybridus HOM05D003908 ORTHO05D004488 3.9e-27 125.9 78 79.5
Duzib138G1305 Durio zibethinus HOM05D003908 ORTHO05D004488 3.9e-27 125.9 78 80.8
QL03p025800 Quercus lobata HOM05D003908 ORTHO05D004488 3.9e-27 125.9 78 79.5
Rhsim01G0270200 Rhododendron simsii HOM05D003908 ORTHO05D004488 3.9e-27 125.9 78 80.8
CANSAT21G0496 Cannabis sativa HOM05D003908 ORTHO05D004488 5.1e-27 125.6 78 79.5
Lalb_Chr12g0209211 Lupinus albus HOM05D003908 ORTHO05D004488 5.1e-27 125.6 78 79.5
Peaxi162Scf00198g01017 Petunia axillaris HOM05D003908 ORTHO05D004488 5.1e-27 125.6 80 77.5
Prupe.6G005500 Prunus persica HOM05D003908 ORTHO05D004488 5.1e-27 125.6 78 80.8
CSS0040042 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 6.6e-27 125.2 78 78.2
Migut.D00367 Erythranthe guttata HOM05D003908 ORTHO05D004488 6.6e-27 125.2 78 79.5
Eucgr.C04384 Eucalyptus grandis HOM05D003908 ORTHO05D004488 6.6e-27 125.2 78 79.5
Psat7g086640 Pisum sativum HOM05D003908 ORTHO05D004488 6.6e-27 125.2 78 79.5
Thecc.01G268300 Theobroma cacao HOM05D003908 ORTHO05D004488 6.6e-27 125.2 78 79.5
Thecc.05G283700 Theobroma cacao HOM05D003908 ORTHO05D004488 6.6e-27 125.2 78 78.2
HPP92_001854 Vanilla planifolia HOM05D003908 ORTHO05D004488 6.6e-27 125.2 78 79.5
Zm00001eb111070 Zea mays HOM05D003908 ORTHO05D004488 6.6e-27 125.2 78 79.5
CDE09G0316 Ceratophyllum demersum HOM05D003908 ORTHO05D004488 8.7e-27 124.8 78 79.5
COL.COLO4_15346 Corchorus olitorius HOM05D003908 ORTHO05D004488 8.7e-27 124.8 78 78.2
Eucgr.B02621 Eucalyptus grandis HOM05D003908 ORTHO05D004488 8.7e-27 124.8 78 79.5
Nn3g19495 Nelumbo nucifera HOM05D003908 ORTHO05D004488 8.7e-27 124.8 78 80.8
GSVIVG01031574001 Vitis vinifera HOM05D003908 ORTHO05D004488 8.7e-27 124.8 78 79.5
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 1.1e-26 124.4 75 82.7
ClCG03G017370 Citrullus lanatus HOM05D003908 ORTHO05D004488 1.1e-26 124.4 78 76.9
MELO3C015218.2 Cucumis melo HOM05D003908 ORTHO05D004488 1.1e-26 124.4 78 76.9
CsaV3_1G042520 Cucumis sativus L. HOM05D003908 ORTHO05D004488 1.1e-26 124.4 78 76.9
Dinv34562 Davidia involucrata HOM05D003908 ORTHO05D004488 1.1e-26 124.4 78 79.5
Sed0024016 Sechium edule HOM05D003908 ORTHO05D004488 1.1e-26 124.4 78 75.6
Sc17g0001030 Simmondsia chinensis HOM05D003908 ORTHO05D004488 1.1e-26 124.4 78 76.9
THA.LOC104801254 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 1.1e-26 124.4 78 79.5
Atru.chr4.2009 Acer truncatum HOM05D003908 ORTHO05D004488 1.5e-26 124.0 78 76.9
arahy.Tifrunner.gnm1.ann1.95Q6AF Arachis hypogaea HOM05D003908 ORTHO05D004488 1.5e-26 124.0 78 79.5
arahy.Tifrunner.gnm1.ann1.LT9XWZ Arachis hypogaea HOM05D003908 ORTHO05D004488 1.5e-26 124.0 78 79.5
arahy.Tifrunner.gnm1.ann1.XQ21SD Arachis hypogaea HOM05D003908 ORTHO05D004488 1.5e-26 124.0 78 79.5
arahy.Tifrunner.gnm1.ann1.Y10HXA Arachis hypogaea HOM05D003908 ORTHO05D004488 1.5e-26 124.0 78 79.5
Dinv04731 Davidia involucrata HOM05D003908 ORTHO05D004488 1.5e-26 124.0 78 79.5
SalBow3G3620 Salvia bowleyana HOM05D003908 ORTHO05D004488 1.5e-26 124.0 78 76.9
Sed0027410 Sechium edule HOM05D003908 ORTHO05D004488 1.5e-26 124.0 78 75.6
HPP92_018775 Vanilla planifolia HOM05D003908 ORTHO05D004488 1.5e-26 124.0 78 78.2
Actinidia19977 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
Actinidia27523 Actinidia chinensis HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
CSS0027656 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
CSS0036720 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
CSS0040700 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
CSS0045088 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
MD04G1224300 Malus domestica HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 79.5
Nitab4.5_0000360g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
Nitab4.5_0002776g0060 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
Os02g0824700 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 79.5
Os04g0137500 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 79.5
Peaxi162Scf00199g00925 Petunia axillaris HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
Phvul.002G186900 Phaseolus vulgaris HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 79.5
Solyc02g068450.3 Solanum lycopersicum HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
Sopen02g017590 Solanum pennellii HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
PGSC0003DMG400009421 Solanum tuberosum HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
unitig_22.g5278 Utricularia gibba HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
Zm00001eb330190 Zea mays HOM05D003908 ORTHO05D004488 1.9e-26 123.6 78 78.2
Glyma.05G135300 Glycine max HOM05D003908 ORTHO05D004488 2.5e-26 123.2 78 78.2
Glyma.08G090500 Glycine max HOM05D003908 ORTHO05D004488 2.5e-26 123.2 78 78.2
PSO384G1262 Papaver somniferum HOM05D003908 ORTHO05D004488 2.5e-26 123.2 78 79.5
EL10Ac5g10467 Beta vulgaris HOM05D003908 ORTHO05D004488 3.3e-26 122.9 78 78.2
FvH4_6g02960 Fragaria vesca HOM05D003908 ORTHO05D004488 3.3e-26 122.9 78 80.8
Hma1.2p1_0760F.1_g214230 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 3.3e-26 122.9 78 76.9
Lj1g0011223 Lotus japonicus HOM05D003908 ORTHO05D004488 3.3e-26 122.9 78 78.2
Nitab4.5_0000443g0180 Nicotiana tabacum HOM05D003908 ORTHO05D004488 3.3e-26 122.9 78 75.6
PSO210G0243 Papaver somniferum HOM05D003908 ORTHO05D004488 3.3e-26 122.9 78 78.2
PSO832G4196 Papaver somniferum HOM05D003908 ORTHO05D004488 3.3e-26 122.9 78 78.2
THA.LOC104825983 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 3.3e-26 122.9 78 78.2
VMungo0251G3698 Vigna mungo HOM05D003908 ORTHO05D004488 3.3e-26 122.9 78 78.2
Atru.chr2.813 Acer truncatum HOM05D003908 ORTHO05D004488 4.3e-26 122.5 78 75.6
Ca_18213_v3 Cicer arietinum L. HOM05D003908 ORTHO05D004488 4.3e-26 122.5 78 78.2
HanXRQChr03g0088561 Helianthus annuus HOM05D003908 ORTHO05D004488 4.3e-26 122.5 78 76.9
Hma1.2p1_0172F.1_g076150 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 4.3e-26 122.5 78 78.2
Lj4g0023890 Lotus japonicus HOM05D003908 ORTHO05D004488 4.3e-26 122.5 78 76.9
CAN.G1299.5 Capsicum annuum HOM05D003908 ORTHO05D004488 5.6e-26 122.1 78 75.6
Gohir.A08G188000 Gossypium hirsutum HOM05D003908 ORTHO05D004488 5.6e-26 122.1 78 76.9
Gohir.D08G206400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 5.6e-26 122.1 78 76.9
Gorai.004G218600 Gossypium raimondii HOM05D003908 ORTHO05D004488 5.6e-26 122.1 78 76.9
PSO135G0069 Papaver somniferum HOM05D003908 ORTHO05D004488 5.6e-26 122.1 78 78.2
TWI12G1100 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 5.6e-26 122.1 78 74.4
Gohir.A08G215400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 7.3e-26 121.7 78 75.6
Gorai.004G246600 Gossypium raimondii HOM05D003908 ORTHO05D004488 7.3e-26 121.7 78 75.6
Nitab4.5_0002305g0050 Nicotiana tabacum HOM05D003908 ORTHO05D004488 7.3e-26 121.7 78 76.9
Oeu018177.1 Olea europaea HOM05D003908 ORTHO05D004488 7.3e-26 121.7 78 78.2
PGR031G1854 Punica granatum HOM05D003908 ORTHO05D004488 7.3e-26 121.7 78 79.5
Duzib133G0635 Durio zibethinus HOM05D003908 ORTHO05D004488 9.6e-26 121.3 78 78.2
MD12G1241000 Malus domestica HOM05D003908 ORTHO05D004488 9.6e-26 121.3 78 78.2
Manes.07G050600 Manihot esculenta HOM05D003908 ORTHO05D004488 9.6e-26 121.3 78 76.9
Potri.005G217600 Populus trichocarpa HOM05D003908 ORTHO05D004488 9.6e-26 121.3 78 78.2
TPR.G34752 Trifolium pratense HOM05D003908 ORTHO05D004488 9.6e-26 121.3 78 76.9
MSTRG.21514 Avicennia marina HOM05D003908 ORTHO05D004488 1.3e-25 120.9 78 74.4
C02p39240 Brassica napus HOM05D003908 ORTHO05D004488 1.3e-25 120.9 81 71.6
BolC2t09935H Brassica oleracea HOM05D003908 ORTHO05D004488 1.3e-25 120.9 81 71.6
Cpa.g.sc117.89 Carica papaya HOM05D003908 ORTHO05D004488 1.3e-25 120.9 78 76.9
ECA240G0363 Erigeron canadensis HOM05D003908 ORTHO05D004488 1.3e-25 120.9 78 75.6
FAN05G0658 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.3e-25 120.9 78 79.5
FAN09G2689 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.3e-25 120.9 78 79.5
FAN14G5491 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.3e-25 120.9 78 79.5
Sabra05G0166800 Salix brachista HOM05D003908 ORTHO05D004488 1.3e-25 120.9 78 76.9
CSS0024256 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.6e-25 120.6 72 79.2
CSS0029390 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.6e-25 120.6 72 79.2
CSS0046821 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.6e-25 120.6 72 79.2
SGA_v2.0_scaffold138G35289 Striga asiatica HOM05D003696 ORTHO05D005158 1.6e-25 120.6 78 74.4
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 1.6e-25 120.6 78 74.4
Aa31LG5G2250 Aethionema arabicum HOM05D003908 ORTHO05D004488 2.1e-25 120.2 78 75.6
Cc09_g07930 Coffea canephora HOM05D003908 ORTHO05D004488 2.1e-25 120.2 78 73.1
RcHm_v2.0_Chr3g0451151 Rosa chinensis HOM05D003908 ORTHO05D004488 2.8e-25 119.8 78 78.2
Sp6g02530 Schrenkiella parvula HOM05D003908 ORTHO05D004488 2.8e-25 119.8 76 76.3
AL6G50430 Arabidopsis lyrata HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 73.7
AT4G02620 Arabidopsis thaliana HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 73.7
BcaB01g02026 Brassica carinata HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 75.0
BcaB01g02477 Brassica carinata HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 75.0
BcaC04g24002 Brassica carinata HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 75.0
A03p30970 Brassica napus HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 75.0
A09p02050 Brassica napus HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 75.0
C09p02140 Brassica napus HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 75.0
BolC9t53144H Brassica oleracea HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 75.0
BraA03t12274Z Brassica rapa HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 75.0
BraA09t35854Z Brassica rapa HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 75.0
Carub.0006s3452 Capsella rubella HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 73.7
Thhalv10029066m.g Eutrema salsugineum HOM05D003908 ORTHO05D004488 3.6e-25 119.4 76 76.3
Gohir.A13G052900 Gossypium hirsutum HOM05D003908 ORTHO05D004488 3.6e-25 119.4 78 74.4
Lsat_1_v5_gn_6_91060 Lactuca sativa HOM05D003908 ORTHO05D004488 3.6e-25 119.4 78 73.1
Hund02874 Selenicereus undatus HOM05D003908 ORTHO05D004488 3.6e-25 119.4 78 73.1
BcaC01g06745 Brassica carinata HOM05D003908 ORTHO05D004488 8.1e-25 118.2 76 73.7
C03p37740 Brassica napus HOM05D003908 ORTHO05D004488 8.1e-25 118.2 76 73.7
BolC3t16064H Brassica oleracea HOM05D003908 ORTHO05D004488 8.1e-25 118.2 76 73.7
CARHR250910 Cardamine hirsuta HOM05D003908 ORTHO05D004488 8.1e-25 118.2 76 72.4
CiPaw.04G181400 Carya illinoinensis HOM05D003908 ORTHO05D004488 8.1e-25 118.2 79 74.7
TWI18G0751 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 8.1e-25 118.2 78 73.1
Gohir.D08G232100 Gossypium hirsutum HOM05D003908 ORTHO05D004488 1.8e-24 117.1 78 74.4
Gorai.013G079800 Gossypium raimondii HOM05D003908 ORTHO05D004488 1.8e-24 117.1 78 74.4
BcaC03g16154 Brassica carinata HOM05D003908 ORTHO05D004488 3.1e-24 116.3 81 67.9
Pp3c6_17470 Physcomitrium patens HOM05D003908 ORTHO05D004488 4.0e-24 115.9 72 72.2
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 4.0e-24 115.9 78 70.5
Ciclev10022651m.g Citrus clementina HOM05D003908 ORTHO05D004488 5.3e-24 115.5 70 80.0
Gohir.D13G069500 Gossypium hirsutum HOM05D003908 ORTHO05D004488 5.3e-24 115.5 72 77.8
Pp3c25_8080 Physcomitrium patens HOM05D003908 ORTHO05D004488 5.3e-24 115.5 72 73.6
Mapoly0079s0004 Marchantia polymorpha HOM05D003908 ORTHO05D004488 9.0e-24 114.8 75 72.0
CSS0043230 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 2.0e-23 113.6 70 77.1
CBR_g38932 Chara braunii HOM05D003908 ORTHO05D004488 3.4e-23 112.8 82 64.6
CSS0038153 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 5.8e-23 112.1 66 80.3
SMO367G0680 Selaginella moellendorffii HOM05D003908 ORTHO05D004488 1.7e-22 110.5 75 65.3
CSS0044738 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 4.9e-22 109.0 69 78.3
Nitab4.5_0000138g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 1.1e-21 107.8 63 82.5
MCO03G460 Micromonas commoda HOM05D003908 ORTHO05D004488 3.0e-19 99.8 73 64.4
Actinidia04661 Actinidia chinensis HOM05D003908 ORTHO05D004488 5.1e-19 99.0 64 78.1
Actinidia21151 Actinidia chinensis HOM05D003908 ORTHO05D004488 5.1e-19 99.0 64 78.1
PRCOL_00000544 Prasinoderma coloniale HOM05D003908 ORTHO05D004488 1.5e-18 97.4 76 59.2
BcaB05g23651 Brassica carinata HOM05D003908 ORTHO05D004488 2.5e-18 96.7 111 49.5
Haze_21722 Corylus avellana HOM05D003908 ORTHO05D004488 1.3e-17 94.4 78 65.4
Haze_26154 Corylus avellana HOM05D003908 ORTHO05D004488 5.3e-16 89.0 89 47.2
Cre10.g446550 Chlamydomonas reinhardtii HOM05D003908 ORTHO05D004488 9.0e-16 88.2 68 57.4
Nitab4.5_0008708g0010 Nicotiana tabacum HOM05D003908 ORTHO05D004488 2.9e-14 83.2 57 70.2
Hund09564 Selenicereus undatus HOM05D003908 ORTHO05D004488 1.9e-13 80.5 50 76.0
Lalb_Chr20g0122811 Lupinus albus HOM05D003908 ORTHO05D004488 9.3e-13 78.2 50 76.0
DCAR_012514 Daucus carota HOM05D003908 ORTHO05D004488 4.6e-12 75.9 47 76.6
DCAR_018445 Daucus carota HOM05D003908 ORTHO05D004488 4.6e-12 75.9 47 76.6
COL.COLO4_30210 Corchorus olitorius HOM05D003908 ORTHO05D004488 1.3e-11 74.3 50 76.0
Peaxi162Scf01294g00317 Petunia axillaris HOM05D003908 ORTHO05D004488 8.1e-09 65.1 35 82.9
CSS0012932 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.2e-07 61.2 34 79.4
AagrBONN_evm.TU.Sc2ySwM_368.148 Anthoceros agrestis HOM05D003908 ORTHO05D004488 1.0e-06 58.2 42 59.5


User provided reference genes

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