Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40605 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1860.5 918 100.0
SEGI_23274 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1328.2 867 77.0
Mapoly0001s0355 Marchantia polymorpha HOM05D003945 ORTHO05D004625 0.0e+00 1252.3 853 73.9
MBI16_g13147_MAGBIO Magnolia biondii HOM05D003945 ORTHO05D004625 0.0e+00 1240.3 818 76.2
Aqoxy6G01012 Aquilegia oxysepala HOM05D003945 ORTHO05D004625 0.0e+00 1227.6 821 75.4
ATR0733G077 Amborella trichopoda HOM05D003945 ORTHO05D004625 0.0e+00 1226.5 823 75.0
Nn5g29493 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1219.1 831 74.6
TAR381G0557 Trochodendron aralioides HOM05D003945 ORTHO05D004625 0.0e+00 1211.1 822 74.5
GSVIVG01009647001 Vitis vinifera HOM05D003945 ORTHO05D004625 0.0e+00 1199.5 824 73.4
CDE04G0514 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1197.2 813 73.8
PSO675G7084 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1196.0 816 74.5
PSO541G5148 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1193.3 816 74.4
CDE07G1908 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1191.0 830 72.2
Cpa.g.sc64.47 Carica papaya HOM05D003945 ORTHO05D004625 0.0e+00 1188.3 820 73.0
Ciclev10000250m.g Citrus clementina HOM05D003945 ORTHO05D004625 0.0e+00 1186.8 818 74.0
CANSAT25G0653 Cannabis sativa HOM05D003945 ORTHO05D004625 0.0e+00 1185.6 832 72.7
Potri.002G133300 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1181.0 822 72.6
Potri.014G040800 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1179.9 822 73.4
Psat5g018920 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1177.5 816 73.0
Duzib116G0373 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1176.8 822 73.2
Gohir.A06G012000 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1176.4 814 73.5
Prupe.1G383600 Prunus persica HOM05D003945 ORTHO05D004625 0.0e+00 1175.6 826 71.9
Nn1g05109 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1174.8 827 71.6
Gohir.D06G009400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1174.5 818 73.1
Gorai.010G012200 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1174.5 818 73.1
Duzib093G0983 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1173.3 822 73.0
Haze_17624 Corylus avellana HOM05D003945 ORTHO05D004625 0.0e+00 1172.5 800 74.1
QL02p007358 Quercus lobata HOM05D003945 ORTHO05D004625 0.0e+00 1171.4 812 73.4
Lj5g0000532 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1170.6 817 72.8
CiPaw.15G072600 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1170.2 814 72.5
Cfa018443 Carpinus fangiana HOM05D003945 ORTHO05D004625 0.0e+00 1169.5 814 73.1
FAN27G0143 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1169.5 818 72.1
Pp3c15_10300 Physcomitrium patens HOM05D003945 ORTHO05D004625 0.0e+00 1169.5 806 73.3
TWI56G0898 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1169.5 795 74.2
Thecc.08G022100 Theobroma cacao HOM05D003945 ORTHO05D004625 0.0e+00 1169.1 822 72.9
Glyma.06G034400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1167.9 817 72.2
FvH4_2g40290 Fragaria vesca HOM05D003945 ORTHO05D004625 0.0e+00 1166.0 818 72.0
Pp3c9_8900 Physcomitrium patens HOM05D003945 ORTHO05D004625 0.0e+00 1166.0 835 71.3
EL10Ac1g01765 Beta vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1165.6 811 72.4
arahy.Tifrunner.gnm1.ann1.6F7CQG Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1165.2 795 74.0
FAN20G0651 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1164.4 818 71.8
Lalb_Chr24g0399061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1164.4 819 71.9
Gorai.009G205100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1164.1 823 73.0
RcHm_v2.0_Chr6g0300451 Rosa chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1164.1 818 71.9
CSS0008782 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 0.0e+00 1162.5 819 71.8
CsaV3_2G028440 Cucumis sativus L. HOM05D003945 ORTHO05D004625 0.0e+00 1162.1 823 72.7
THA.LOC104809128 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1161.7 812 73.4
Duzib041G0798 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1161.4 822 72.3
Medtr3g111630 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1161.4 823 72.2
Glyma.14G077200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1160.6 818 71.1
Manes.05G163500 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1160.2 812 72.9
Gohir.D05G199800 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1159.8 823 72.7
Sed0018308 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1159.1 815 73.0
THA.LOC104806880 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1158.7 813 72.9
VMungo0647G1838 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1157.9 805 72.3
Os03g0731500 Oryza sativa ssp. japonica HOM05D003945 ORTHO05D004625 0.0e+00 1156.0 777 74.5
Phvul.009G055900 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1155.6 824 72.0
Sed0019202 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1155.6 826 71.9
FAN15G1095 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1154.4 828 71.0
Gorai.009G274100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1154.0 824 71.2
arahy.Tifrunner.gnm1.ann1.SKM2GN Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1152.9 830 67.6
TPR.G12378 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1150.2 821 71.5
Gohir.D05G262200 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1149.8 824 71.2
Zm00001eb056220 Zea mays HOM05D003945 ORTHO05D004625 0.0e+00 1149.8 830 70.8
CiPaw.16G054000 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1149.4 809 72.1
Lj4A44G44 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1149.0 772 74.2
Sabra02G0104100 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1148.7 825 71.4
AUR62033857 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1147.5 818 71.6
Cc10_g03360 Coffea canephora HOM05D003945 ORTHO05D004625 0.0e+00 1146.7 812 72.5
Actinidia22566 Actinidia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1144.8 807 71.6
Thhalv10022547m.g Eutrema salsugineum HOM05D003945 ORTHO05D004625 0.0e+00 1143.6 814 71.5
Manes.18G029900 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1143.6 791 72.9
Glyma.04G034200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1143.3 819 70.7
MD08G1036300 Malus domestica HOM05D003945 ORTHO05D004625 0.0e+00 1142.9 798 72.1
PGR031G2694 Punica granatum HOM05D003945 ORTHO05D004625 0.0e+00 1142.9 806 72.8
AUR62041666 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1140.6 844 69.8
Dinv39382 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1140.6 844 70.0
Lalb_Chr22g0355401 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1139.8 820 70.1
TWI12G1285 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1139.8 796 72.7
Lalb_Chr14g0369061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1139.0 817 70.7
Lj1g0024333 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1138.6 823 70.6
Aa31LG9G12670 Aethionema arabicum HOM05D003945 ORTHO05D004625 0.0e+00 1137.9 820 70.9
PGSC0003DMG400016879 Solanum tuberosum HOM05D003945 ORTHO05D004625 0.0e+00 1135.6 820 70.9
BcaC02g10772 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1134.8 811 72.0
C04p25260 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1134.8 811 72.0
BolC4t24032H Brassica oleracea HOM05D003945 ORTHO05D004625 0.0e+00 1134.8 811 72.0
Carub.0008s0641 Capsella rubella HOM05D003945 ORTHO05D004625 0.0e+00 1133.6 783 73.2
Sabra14G0029800 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1133.6 872 68.3
VMungo1309G1712 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1132.9 823 70.6
AL8G18650 Arabidopsis lyrata HOM05D003945 ORTHO05D004625 0.0e+00 1130.9 827 70.1
Gohir.A05G260400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1130.9 824 70.4
Sp2g07000 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1130.5 813 70.8
SpUn0022_0010 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1130.5 813 70.8
SpUn0026_0070 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1130.5 813 70.8
SpUn0029_0030 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1130.5 813 70.8
BcaC06g31752 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1130.2 805 72.3
Lsat_1_v5_gn_1_18561 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1127.1 823 70.4
CARHR181510 Cardamine hirsuta HOM05D003945 ORTHO05D004625 0.0e+00 1126.7 808 71.0
AT5G42620 Arabidopsis thaliana HOM05D003945 ORTHO05D004625 0.0e+00 1125.5 825 70.3
SalBow8G1011 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1124.0 812 71.4
BraA06t27697Z Brassica rapa HOM05D003945 ORTHO05D004625 0.0e+00 1122.8 804 71.8
A06p48280 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1122.5 804 71.8
Eucgr.A00488 Eucalyptus grandis HOM05D003945 ORTHO05D004625 0.0e+00 1120.5 819 70.8
DCAR_012756 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1119.8 806 70.6
Psat6g032680 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1117.4 820 70.4
HanXRQChr04g0104741 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1116.3 810 70.6
Ah.11g043210 Amaranthus hybridus HOM05D003945 ORTHO05D004625 0.0e+00 1115.5 819 69.7
vmacro21611 Vaccinium macrocarpon HOM05D003945 ORTHO05D004625 0.0e+00 1114.0 805 71.7
Nitab4.5_0000110g0200 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1113.2 767 72.9
Sopen04g033470 Solanum pennellii HOM05D003945 ORTHO05D004625 0.0e+00 1112.8 775 72.6
DCAR_019505 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1110.9 787 72.0
HanXRQChr00c0117g0571731 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1110.9 818 69.9
CAN.G371.130 Capsicum annuum HOM05D003945 ORTHO05D004625 0.0e+00 1110.5 809 70.7
Oeu009604.1 Olea europaea HOM05D003945 ORTHO05D004625 0.0e+00 1109.0 842 68.9
Solyc04g079900.3 Solanum lycopersicum HOM05D003945 ORTHO05D004625 0.0e+00 1109.0 775 72.5
MSTRG.24306 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1108.6 824 69.8
Nitab4.5_0003588g0030 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1105.5 776 72.3
MSTRG.1299 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1104.7 802 70.4
HanXRQChr09g0268441 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1098.6 814 69.2
SalBow8G4281 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1090.9 781 71.7
Peaxi162Scf00057g01112 Petunia axillaris HOM05D003945 ORTHO05D004625 0.0e+00 1089.7 825 68.8
ECA247G1056 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1089.3 816 69.1
Phvul.001G016500 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1088.9 696 77.3
ECA232G0159 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1086.2 810 70.4
Hund17646 Selenicereus undatus HOM05D003945 ORTHO05D004625 0.0e+00 1085.9 794 69.0
Atru.chr13.549 Acer truncatum HOM05D003945 ORTHO05D004625 0.0e+00 1078.2 861 66.0
Dinv36042 Davidia involucrata HOM05D003945 ORTHO05D004625 6.3e-312 1074.3 764 72.4
SGA_v2.0_scaffold48G18049 Striga asiatica HOM05D003945 ORTHO05D004625 6.3e-312 1073.5 822 64.8
MELO3C010920.2 Cucumis melo HOM05D003945 ORTHO05D004625 3.1e-311 1071.6 870 64.4
Sc02g0006540 Simmondsia chinensis HOM05D003945 ORTHO05D004625 3.1e-309 1065.1 756 72.4
Lsat_1_v5_gn_4_119740 Lactuca sativa HOM05D003945 ORTHO05D004625 3.4e-308 1061.6 818 68.2
Gohir.A05G196700 Gossypium hirsutum HOM05D003945 ORTHO05D004625 1.7e-307 1059.3 823 67.7
Glyma.17G248400 Glycine max HOM05D003945 ORTHO05D004625 3.8e-307 1058.1 753 71.7
Medtr1g021950 Medicago truncatula HOM05D003945 ORTHO05D004625 7.1e-306 1053.9 822 66.5
Lj4C783T17 Lonicera japonica HOM05D003945 ORTHO05D004625 3.0e-304 1048.5 812 67.2
Ca_13337_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 1.8e-301 1039.3 819 66.4
SGA_v2.0_scaffold24G10266 Striga asiatica HOM05D003945 ORTHO05D004625 1.8e-301 1039.3 873 63.6
Migut.C00687 Erythranthe guttata HOM05D003945 ORTHO05D004625 9.0e-301 1036.9 819 67.2
Rhsim06G0036600 Rhododendron simsii HOM05D003945 ORTHO05D004625 3.2e-298 1028.5 733 72.4
Ca_15527_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 1.9e-295 1019.2 815 66.9
TPR.G15756 Trifolium pratense HOM05D003945 ORTHO05D004625 1.1e-290 1003.4 759 66.3
AagrBONN_evm.TU.Sc2ySwM_228.1369 Anthoceros agrestis HOM05D003945 ORTHO05D004625 1.2e-273 946.8 643 70.6
Oeu019083.2 Olea europaea HOM05D003945 ORTHO05D004625 9.1e-261 904.0 771 64.5
TAR625G1327 Trochodendron aralioides HOM05D003945 ORTHO05D004625 3.8e-243 845.5 817 58.4
CSS0002441 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 1.0e-240 837.4 570 70.7
ClCG08G015350 Citrullus lanatus HOM05D003945 ORTHO05D004625 2.2e-230 803.1 543 76.1
SHI08218 Sapria himalayana HOM05D003945 ORTHO05D004625 1.1e-229 800.8 581 67.5
COL.COLO4_26375 Corchorus olitorius HOM05D003945 ORTHO05D004625 1.5e-223 780.4 493 76.3
TAR625G0556 Trochodendron aralioides HOM05D003945 ORTHO05D004625 2.9e-150 537.0 725 45.8
unitig_899.g15618 Utricularia gibba HOM05D003945 ORTHO05D004625 2.2e-142 510.8 431 60.1
Actinidia15302 Actinidia chinensis HOM05D003945 ORTHO05D004625 7.0e-120 436.0 342 70.5
Actinidia15303 Actinidia chinensis HOM05D003945 ORTHO05D004625 2.1e-108 397.9 309 63.1
unitig_899.g15619 Utricularia gibba HOM05D003945 ORTHO05D004625 1.5e-98 365.2 311 67.2
TAR625G0675 Trochodendron aralioides HOM05D003945 ORTHO05D004625 2.4e-96 357.8 397 51.1
TAR625G1534 Trochodendron aralioides HOM05D003945 ORTHO05D004625 1.1e-91 342.4 580 44.5
HanXRQChr02g0037151 Helianthus annuus HOM05D003945 ORTHO05D004625 3.3e-77 294.3 282 54.3
Pp3c1_5980 Physcomitrium patens HOM05D003945 ORTHO05D004625 1.8e-59 235.3 156 75.0
arahy.Tifrunner.gnm1.ann1.URD35Y Arachis hypogaea HOM05D003945 ORTHO05D004625 6.7e-46 190.3 132 68.2
SGA_v2.0_scaffold18G08518 Striga asiatica HOM05D003945 ORTHO05D004625 7.7e-42 176.8 157 58.0
CBR_g2789 Chara braunii HOM05D003945 ORTHO05D004625 4.8e-36 157.5 502 28.9
PRCOL_00003766 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 7.7e-34 150.2 473 27.1
PRCOL_00006675 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 7.9e-31 140.2 471 27.2
DCAR_031552 Daucus carota HOM05D003945 ORTHO05D004625 2.2e-28 132.1 76 77.6
PRCOL_00001495 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 2.4e-27 128.6 472 28.0
Pp3c1_5940 Physcomitrium patens HOM05D003945 ORTHO05D004625 1.1e-24 119.8 96 63.5
CiPaw.15G072700 Carya illinoinensis HOM05D003945 ORTHO05D004625 1.2e-23 116.3 67 79.1
Cre01.g001400 Chlamydomonas reinhardtii HOM05D003945 ORTHO05D004625 1.6e-23 115.9 457 25.8
TPR.G27891 Trifolium pratense HOM05D003945 ORTHO05D004625 3.8e-17 94.7 65 64.6
CBR_g38919 Chara braunii HOM05D000019 ORTHO05D000353 5.5e-16 90.9 218 32.1
CBR_g32472 Chara braunii HOM05D000019 ORTHO05D000002 9.4e-16 90.1 217 28.6
arahy.Tifrunner.gnm1.ann1.4NEG3Q Arachis hypogaea HOM05D003945 ORTHO05D004625 9.1e-11 73.6 72 47.2
TAR625G0971 Trochodendron aralioides HOM05D003945 ORTHO05D004625 3.5e-10 71.6 76 50.0
CBR_g37162 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-08 65.9 70 45.7
Lsat_1_v5_gn_5_96440 Lactuca sativa HOM05D003945 ORTHO05D004625 3.0e-06 58.5 38 73.7
CBR_g38920 Chara braunii HOM05D003945 ORTHO05D004625 5.2e-06 57.8 138 29.7
SGA_v2.0_scaffold210G42079 Striga asiatica HOM05D003945 ORTHO05D004625 6.8e-06 57.4 106 35.8


User provided reference genes

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