Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 8.0e-126 453.8 227 100.0
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 7.1e-66 254.6 187 65.2
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 4.1e-61 238.8 205 56.6
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 9.0e-61 237.7 196 56.6
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 2.0e-60 236.5 189 59.3
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 2.0e-60 236.5 155 69.7
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 3.4e-60 235.7 193 57.5
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 4.5e-60 235.3 213 54.0
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 5.9e-60 235.0 193 57.5
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 5.9e-60 235.0 166 65.7
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 1.3e-59 233.8 181 61.9
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 1.3e-59 233.8 202 56.9
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 2.2e-59 233.0 187 61.0
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 2.2e-59 233.0 220 54.1
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 2.9e-59 232.6 212 58.5
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 2.9e-59 232.6 192 57.3
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 3.8e-59 232.3 237 49.8
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 5.0e-59 231.9 187 58.8
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 5.0e-59 231.9 180 61.7
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 8.5e-59 231.1 181 63.0
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 8.5e-59 231.1 185 58.9
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 8.5e-59 231.1 174 61.5
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 1.1e-58 230.7 160 65.6
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 1.1e-58 230.7 194 56.2
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 1.4e-58 230.3 179 59.8
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 1.9e-58 229.9 174 63.2
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 2.5e-58 229.6 182 58.8
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 2.5e-58 229.6 187 58.8
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 2.5e-58 229.6 177 61.0
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 2.5e-58 229.6 195 57.9
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 5.5e-58 228.4 180 58.9
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 5.5e-58 228.4 184 59.8
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 5.5e-58 228.4 188 59.6
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 5.5e-58 228.4 185 59.5
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 7.2e-58 228.0 199 55.8
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 9.4e-58 227.6 182 58.2
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 9.4e-58 227.6 186 61.3
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 1.2e-57 227.3 188 59.0
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 1.2e-57 227.3 224 51.3
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 1.2e-57 227.3 182 61.0
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 2.1e-57 226.5 160 64.4
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 2.7e-57 226.1 155 65.8
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 2.7e-57 226.1 182 59.9
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 2.7e-57 226.1 174 59.8
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 3.6e-57 225.7 180 60.0
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 4.6e-57 225.3 176 59.7
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 4.6e-57 225.3 152 67.8
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 4.6e-57 225.3 181 58.0
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 7.9e-57 224.6 177 61.0
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 7.9e-57 224.6 176 59.7
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 1.4e-56 223.8 188 56.4
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 1.4e-56 223.8 155 63.9
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 1.4e-56 223.8 166 63.3
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 2.3e-56 223.0 177 61.6
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 3.0e-56 222.6 188 56.4
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 3.9e-56 222.2 186 54.8
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 6.7e-56 221.5 186 54.3
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 6.7e-56 221.5 189 58.2
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 1.1e-55 220.7 173 59.5
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 2.0e-55 219.9 188 55.9
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 2.5e-55 219.5 197 54.8
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 3.3e-55 219.2 166 62.0
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 4.3e-55 218.8 152 62.5
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 5.7e-55 218.4 181 57.5
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 5.7e-55 218.4 185 55.7
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 5.7e-55 218.4 152 64.5
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 7.4e-55 218.0 174 59.8
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 9.7e-55 217.6 155 62.6
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 1.3e-54 217.2 191 53.9
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 1.3e-54 217.2 191 53.9
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 1.3e-54 217.2 192 54.7
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 1.3e-54 217.2 191 53.9
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 1.7e-54 216.9 206 51.5
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 1.7e-54 216.9 155 63.2
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 1.7e-54 216.9 192 54.7
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 2.2e-54 216.5 206 51.9
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 2.2e-54 216.5 192 54.7
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 2.2e-54 216.5 183 58.5
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 2.8e-54 216.1 193 55.4
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 3.7e-54 215.7 155 62.6
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 3.7e-54 215.7 159 62.9
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 3.7e-54 215.7 157 63.1
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 4.8e-54 215.3 192 55.2
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 4.8e-54 215.3 192 54.2
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 4.8e-54 215.3 192 54.2
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 4.8e-54 215.3 171 58.5
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 6.3e-54 214.9 192 53.6
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 6.3e-54 214.9 192 54.7
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 6.3e-54 214.9 152 63.2
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 8.2e-54 214.5 188 54.3
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 8.2e-54 214.5 188 54.3
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 1.8e-53 213.4 206 52.4
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.8e-53 213.4 192 54.7
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 4.1e-53 212.2 160 60.0
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 6.9e-53 211.5 176 56.8
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 1.3e-51 207.2 178 53.9
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 1.3e-51 207.2 176 55.1
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 1.7e-51 206.8 174 55.7
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 1.7e-51 206.8 195 51.3
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 2.2e-51 206.5 163 60.1
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 3.8e-51 205.7 155 60.0
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 1.9e-50 203.4 211 49.3
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 1.9e-50 203.4 141 63.8
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 3.2e-50 202.6 144 64.6
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 9.4e-50 201.1 155 58.7
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 1.6e-49 200.3 211 48.8
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 5.7e-47 191.8 155 57.4
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 5.7e-47 191.8 225 46.2
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 1.3e-46 190.7 147 59.9
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 2.8e-46 189.5 192 50.5
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 1.2e-41 174.1 154 53.2
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 2.7e-41 172.9 204 45.1
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 5.7e-39 165.2 174 48.9
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 3.7e-38 162.5 154 53.2
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 1.4e-37 160.6 105 69.5
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 2.6e-36 156.4 154 49.4
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 3.5e-36 156.0 112 62.5
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 7.7e-36 154.8 135 54.8
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 3.2e-34 149.4 142 50.7
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 3.2e-34 149.4 142 50.7
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 1.0e-32 144.4 95 67.4
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 4.0e-32 142.5 142 48.6
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 3.4e-31 139.4 102 60.8
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 4.5e-28 129.0 82 69.5
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 8.5e-27 124.8 111 56.8
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 2.0e-15 87.0 152 30.9
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 2.6e-15 86.7 88 52.3
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 4.9e-14 82.4 83 54.2
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 1.8e-13 80.5 129 31.8
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 1.8e-13 80.5 77 50.6
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 5.4e-13 79.0 50 66.0
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 1.9e-10 70.5 45 66.7
Cre11.g467679 Chlamydomonas reinhardtii HOM05D019738 ORTHO05D022279 8.9e-08 61.6 153 27.5


User provided reference genes

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