Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17080 Sequoiadendron giganteum HOM05D006802 ORTHO05D008507 3.9e-207 724.5 360 100.0
SEGI_40565 Sequoiadendron giganteum HOM05D006802 ORTHO05D008507 3.9e-207 724.5 360 100.0
Atru.chr5.1503 Acer truncatum HOM05D006802 ORTHO05D008507 1.2e-43 181.4 339 36.0
Thecc.01G272900 Theobroma cacao HOM05D006802 ORTHO05D008507 2.1e-43 180.6 339 37.8
Cfa006184 Carpinus fangiana HOM05D006802 ORTHO05D008507 2.7e-43 180.3 355 34.9
QL12p020415 Quercus lobata HOM05D006802 ORTHO05D008507 4.6e-43 179.5 334 36.5
CAN.G433.12 Capsicum annuum HOM05D006802 ORTHO05D008507 6.1e-43 179.1 346 37.0
Prupe.8G235900 Prunus persica HOM05D006802 ORTHO05D008507 7.9e-43 178.7 336 37.2
Gohir.D12G002800 Gossypium hirsutum HOM05D006802 ORTHO05D008507 1.1e-41 174.9 357 36.4
Gorai.008G002600 Gossypium raimondii HOM05D006802 ORTHO05D008507 1.1e-41 174.9 334 35.9
PGSC0003DMG400019349 Solanum tuberosum HOM05D006802 ORTHO05D008507 1.1e-41 174.9 374 36.4
Gohir.A12G003100 Gossypium hirsutum HOM05D006802 ORTHO05D008507 1.5e-41 174.5 359 36.5
Duzib133G0133 Durio zibethinus HOM05D006802 ORTHO05D008507 1.9e-41 174.1 362 35.6
ECA236G2804 Erigeron canadensis HOM05D006802 ORTHO05D008507 1.9e-41 174.1 337 35.3
Sopen09g027330 Solanum pennellii HOM05D006802 ORTHO05D008507 1.9e-41 174.1 342 37.1
Hund02858 Selenicereus undatus HOM05D006802 ORTHO05D008507 2.5e-41 173.7 357 33.9
Haze_04660 Corylus avellana HOM05D006802 ORTHO05D008507 9.7e-41 171.8 338 34.6
Ah.11g050290 Amaranthus hybridus HOM05D006802 ORTHO05D008507 2.2e-40 170.6 350 34.6
COL.COLO4_09049 Corchorus olitorius HOM05D006802 ORTHO05D008507 2.2e-40 170.6 336 35.4
Lalb_Chr02g0142571 Lupinus albus HOM05D006802 ORTHO05D008507 2.2e-40 170.6 340 35.9
FAN15G2517 Fragaria x ananassa HOM05D006802 ORTHO05D008507 3.7e-40 169.9 332 35.8
FAN15G2655 Fragaria x ananassa HOM05D006802 ORTHO05D008507 3.7e-40 169.9 332 35.8
Hma1.2p1_1924F.1_g307690 Hydrangea macrophylla HOM05D006802 ORTHO05D008507 4.8e-40 169.5 341 37.0
RcHm_v2.0_Chr6g0290231 Rosa chinensis HOM05D006802 ORTHO05D008507 1.8e-39 167.5 362 32.9
ClCG09G007380 Citrullus lanatus HOM05D006802 ORTHO05D008507 2.4e-39 167.2 338 33.7
HanXRQChr04g0115321 Helianthus annuus HOM05D006802 ORTHO05D008507 2.4e-39 167.2 335 37.3
CSS0013542 Camellia sinensis var. sinensis HOM05D006802 ORTHO05D008507 5.3e-39 166.0 336 34.8
Lj1A51G14 Lonicera japonica HOM05D006802 ORTHO05D008507 5.3e-39 166.0 347 34.3
Sabra02G0040100 Salix brachista HOM05D006802 ORTHO05D008507 5.3e-39 166.0 363 33.1
Sed0009701 Sechium edule HOM05D006802 ORTHO05D008507 5.3e-39 166.0 340 36.2
EL10Ac5g10508 Beta vulgaris HOM05D006802 ORTHO05D008507 1.2e-38 164.9 337 35.3
Cpa.g.sc52.110 Carica papaya HOM05D006802 ORTHO05D008507 3.4e-38 163.3 333 35.1
Potri.002G049300 Populus trichocarpa HOM05D006802 ORTHO05D008507 3.4e-38 163.3 372 32.8
PSO170G3117 Papaver somniferum HOM05D006802 ORTHO05D008507 5.9e-38 162.5 333 33.3
FAN27G2418 Fragaria x ananassa HOM05D006802 ORTHO05D008507 7.7e-38 162.2 336 34.5
PGR044G0137 Punica granatum HOM05D006802 ORTHO05D008507 7.7e-38 162.2 334 36.2
PGR047G0003 Punica granatum HOM05D006802 ORTHO05D008507 7.7e-38 162.2 334 36.2
CANSAT25G2646 Cannabis sativa HOM05D006802 ORTHO05D008507 1.0e-37 161.8 336 34.8
MD03G1259400 Malus domestica HOM05D006802 ORTHO05D008507 1.0e-37 161.8 331 34.7
MBI11_g04239_MAGBIO Magnolia biondii HOM05D006802 ORTHO05D008507 1.3e-37 161.4 356 33.7
FAN20G1382 Fragaria x ananassa HOM05D006802 ORTHO05D008507 2.2e-37 160.6 332 34.9
Aqoxy2G03446 Aquilegia oxysepala HOM05D006802 ORTHO05D008507 5.0e-37 159.5 351 32.8
Sp5g00240 Schrenkiella parvula HOM05D006802 ORTHO05D008507 2.5e-36 157.1 359 32.9
CSS0022180 Camellia sinensis var. sinensis HOM05D006802 ORTHO05D008507 3.2e-36 156.8 335 34.0
DCAR_005859 Daucus carota HOM05D006802 ORTHO05D008507 3.2e-36 156.8 345 35.1
unitig_8.g3726 Utricularia gibba HOM05D006802 ORTHO05D008507 4.2e-36 156.4 375 31.5
CsaV3_7G027850 Cucumis sativus L. HOM05D006802 ORTHO05D008507 5.5e-36 156.0 334 35.6
vmacro14901 Vaccinium macrocarpon HOM05D006802 ORTHO05D008507 1.6e-35 154.5 344 33.7
AL5G46150 Arabidopsis lyrata HOM05D006802 ORTHO05D008507 2.1e-35 154.1 339 33.6
Eucgr.K03337 Eucalyptus grandis HOM05D006802 ORTHO05D008507 2.1e-35 154.1 364 32.7
Thhalv10006021m.g Eutrema salsugineum HOM05D006802 ORTHO05D008507 2.7e-35 153.7 333 32.7
Manes.01G204700 Manihot esculenta HOM05D006802 ORTHO05D008507 6.1e-35 152.5 346 31.8
Sc05g0001260 Simmondsia chinensis HOM05D006802 ORTHO05D008507 7.9e-35 152.1 310 35.8
AagrBONN_evm.TU.Sc2ySwM_368.2173 Anthoceros agrestis HOM05D006802 ORTHO05D008507 1.4e-34 151.4 350 32.6
Oeu023625.1 Olea europaea HOM05D006802 ORTHO05D008507 8.8e-34 148.7 381 32.0
ATR0665G117 Amborella trichopoda HOM05D006802 ORTHO05D008507 1.1e-33 148.3 356 30.9
Carub.0005s2995 Capsella rubella HOM05D006802 ORTHO05D008507 1.1e-33 148.3 331 33.2
Cc01_g19110 Coffea canephora HOM05D006802 ORTHO05D008507 1.1e-33 148.3 336 32.4
FvH4_2g23081 Fragaria vesca HOM05D006802 ORTHO05D008507 2.0e-33 147.5 332 33.7
FAN24G3569 Fragaria x ananassa HOM05D006802 ORTHO05D008507 2.5e-33 147.1 342 33.3
Lsat_1_v5_gn_8_57120 Lactuca sativa HOM05D006802 ORTHO05D008507 2.5e-33 147.1 337 31.5
Glyma.02G144900 Glycine max HOM05D006802 ORTHO05D008507 3.3e-33 146.7 384 31.5
CDE05G0787 Ceratophyllum demersum HOM05D006802 ORTHO05D008507 4.3e-33 146.4 332 34.9
MELO3C015801.2 Cucumis melo HOM05D006802 ORTHO05D008507 7.4e-33 145.6 313 36.1
Psat6g059280 Pisum sativum HOM05D006802 ORTHO05D008507 7.4e-33 145.6 342 34.5
Rhsim01G0272400 Rhododendron simsii HOM05D006802 ORTHO05D008507 9.7e-33 145.2 325 32.9
THA.LOC104801985 Tarenaya hassleriana HOM05D006802 ORTHO05D008507 2.2e-32 144.1 337 33.5
arahy.Tifrunner.gnm1.ann1.BH5QN1 Arachis hypogaea HOM05D006802 ORTHO05D008507 6.3e-32 142.5 369 31.2
Lj5g0013924 Lotus japonicus HOM05D006802 ORTHO05D008507 6.3e-32 142.5 378 33.3
Phvul.007G174300 Phaseolus vulgaris HOM05D006802 ORTHO05D008507 6.3e-32 142.5 377 29.7
Aa31LG10G17140 Aethionema arabicum HOM05D000738 ORTHO05D000675 8.2e-32 142.1 342 32.5
BolC4t24525H Brassica oleracea HOM05D006802 ORTHO05D000675 8.2e-32 142.1 330 32.7
C04p29940 Brassica napus HOM05D000738 ORTHO05D000675 1.1e-31 141.7 330 32.7
AUR62011982 Chenopodium quinoa HOM05D006802 ORTHO05D008507 1.4e-31 141.4 313 32.6
SalBow4G3164 Salvia bowleyana HOM05D006802 ORTHO05D008507 1.4e-31 141.4 382 32.7
SalBow4G0867 Salvia bowleyana HOM05D006802 ORTHO05D008507 1.8e-31 141.0 336 33.6
Medtr1g071470 Medicago truncatula HOM05D006802 ORTHO05D008507 3.1e-31 140.2 321 36.8
AT3G63290 Arabidopsis thaliana HOM05D006802 ORTHO05D008507 6.9e-31 139.0 369 30.9
A04p00130 Brassica napus HOM05D006802 ORTHO05D008507 9.1e-31 138.7 340 30.9
TPR.G25699 Trifolium pratense HOM05D006802 ORTHO05D008507 2.0e-30 137.5 372 32.0
BraA04t15733Z Brassica rapa HOM05D006802 ORTHO05D000675 2.6e-30 137.1 340 31.2
VMungo0720G2797 Vigna mungo HOM05D006802 ORTHO05D008507 2.6e-30 137.1 361 31.0
Migut.D00338 Erythranthe guttata HOM05D006802 ORTHO05D008507 4.5e-30 136.3 344 30.8
Ciclev10023787m.g Citrus clementina HOM05D006802 ORTHO05D008507 3.8e-29 133.3 344 31.7
TWI75G0310 Tripterygium wilfordii HOM05D006802 ORTHO05D008507 5.0e-29 132.9 343 30.3
AUR62032294 Chenopodium quinoa HOM05D006802 ORTHO05D008507 1.1e-28 131.7 315 31.4
Hma1.2p1_1924F.1_g307700 Hydrangea macrophylla HOM05D006802 ORTHO05D008507 1.6e-27 127.9 206 40.3
arahy.Tifrunner.gnm1.ann1.M4INHU Arachis hypogaea HOM05D006802 ORTHO05D008507 2.1e-27 127.5 355 30.1
Pp3c22_5720 Physcomitrium patens HOM05D006802 ORTHO05D008507 4.7e-27 126.3 414 28.7
SGA_v2.0_scaffold138G35303 Striga asiatica HOM05D006802 ORTHO05D008507 7.9e-27 125.6 335 31.3
CiPaw.07G088100 Carya illinoinensis HOM05D006802 ORTHO05D008507 1.0e-26 125.2 349 30.4
Ca_09735_v3 Cicer arietinum L. HOM05D000738 ORTHO05D000675 1.0e-26 125.2 313 32.6
FAN27G1711 Fragaria x ananassa HOM05D006802 ORTHO05D008507 5.1e-26 122.9 201 38.3
CARHR291660 Cardamine hirsuta HOM05D006802 ORTHO05D008507 6.7e-26 122.5 341 29.6
Zm00001eb202090 Zea mays HOM05D006802 ORTHO05D008507 6.7e-26 122.5 337 32.6
Mapoly0127s0046 Marchantia polymorpha HOM05D006802 ORTHO05D008507 9.7e-25 118.6 366 29.2
Os10g0208500 Oryza sativa ssp. japonica HOM05D006802 ORTHO05D008507 2.0e-22 110.9 313 31.9
BcaB02g08069 Brassica carinata HOM05D006802 ORTHO05D008507 4.5e-22 109.8 200 35.0
SMO358G0716 Selaginella moellendorffii HOM05D006802 ORTHO05D008507 7.7e-22 109.0 326 27.6
Pp3c22_5780 Physcomitrium patens HOM05D006802 ORTHO05D008507 3.2e-20 103.6 375 27.5
Dinv32894 Davidia involucrata HOM05D000738 ORTHO05D000675 3.0e-18 97.1 137 40.1
Actinidia21140 Actinidia chinensis HOM05D006802 ORTHO05D008507 9.7e-17 92.0 209 32.5
Solyc09g065580.4 Solanum lycopersicum HOM05D006802 ORTHO05D008507 2.2e-16 90.9 325 27.4
Nitab4.5_0000252g0180 Nicotiana tabacum HOM05D006802 ORTHO05D008507 3.7e-16 90.1 323 27.6
Peaxi162Scf00230g00716 Petunia axillaris HOM05D006802 ORTHO05D008507 1.6e-14 84.7 345 25.8
Nitab4.5_0000678g0020 Nicotiana tabacum HOM05D006802 ORTHO05D008507 7.7e-14 82.4 348 24.4
MBI11_g35085_MAGBIO Magnolia biondii HOM05D006802 ORTHO05D008507 1.0e-13 82.0 76 52.6
GSVIVG01001200001 Vitis vinifera HOM05D006802 ORTHO05D008507 1.7e-13 81.3 97 40.2
MBI11_g35086_MAGBIO Magnolia biondii HOM05D006802 ORTHO05D008507 5.2e-10 69.7 202 28.7
Glyma.10G029100 Glycine max HOM05D006802 ORTHO05D008507 2.4e-07 60.8 177 28.8
CBR_g56394 Chara braunii HOM05D006802 ORTHO05D008507 1.6e-06 58.2 119 35.3
MD11G1280000 Malus domestica HOM05D006802 ORTHO05D008507 1.6e-06 58.2 46 54.3


User provided reference genes

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