Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40473 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 6.1e-236 820.5 422 100.0
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 2.8e-148 529.3 412 66.0
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 1.8e-147 526.6 412 65.3
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 6.9e-147 524.6 403 66.3
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 9.0e-147 524.2 412 65.0
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 1.5e-146 523.5 406 65.8
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 8.4e-145 517.7 403 66.5
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 2.4e-144 516.2 403 64.3
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 3.2e-144 515.8 403 64.3
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 4.2e-144 515.4 408 65.7
CSS0018407 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 4.2e-144 515.4 408 65.7
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 7.1e-144 514.6 412 63.8
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 7.1e-144 514.6 412 63.8
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 9.3e-144 514.2 403 65.5
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 1.6e-143 513.5 415 63.6
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 2.7e-143 512.7 406 64.8
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 1.3e-142 510.4 415 63.6
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 3.9e-142 508.8 412 63.3
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 6.7e-142 508.1 403 65.0
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 1.1e-141 507.3 403 63.8
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.5e-141 506.9 415 62.4
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 4.3e-141 505.4 403 63.8
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 9.6e-141 504.2 403 64.0
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 1.6e-140 503.4 406 64.3
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 2.8e-140 502.7 403 64.5
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 1.1e-139 500.7 403 63.5
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 1.4e-139 500.4 403 62.5
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 1.8e-139 500.0 402 63.9
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 2.4e-139 499.6 403 63.5
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 5.3e-139 498.4 433 59.8
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 9.0e-139 497.7 407 60.9
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 1.2e-138 497.3 403 63.5
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 2.0e-138 496.5 416 60.8
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 4.5e-138 495.4 413 61.7
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 4.5e-138 495.4 403 63.0
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 5.8e-138 495.0 411 62.5
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 7.6e-138 494.6 407 61.2
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 7.6e-138 494.6 403 62.0
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 7.6e-138 494.6 412 62.1
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 1.3e-137 493.8 404 63.1
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 2.2e-137 493.0 413 61.3
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 2.9e-137 492.7 403 63.3
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 2.9e-137 492.7 416 60.6
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 3.8e-137 492.3 404 61.9
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 6.5e-137 491.5 404 62.4
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 1.4e-136 490.3 404 62.4
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 1.9e-136 490.0 410 61.7
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 1.9e-136 490.0 403 62.5
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 2.5e-136 489.6 403 61.8
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 2.5e-136 489.6 403 62.5
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 5.5e-136 488.4 404 62.1
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 5.5e-136 488.4 405 61.7
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 7.1e-136 488.0 416 61.1
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 7.9e-135 484.6 412 59.5
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 1.3e-134 483.8 403 62.0
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 1.3e-134 483.8 404 61.4
Ciclev10011943m.g Citrus clementina HOM05D003845 ORTHO05D004161 6.7e-134 481.5 376 64.1
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 6.7e-134 481.5 411 59.9
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 1.9e-133 479.9 469 55.9
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 3.1e-131 472.6 404 59.9
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 5.3e-131 471.9 403 59.6
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 5.3e-131 471.9 404 60.6
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 1.5e-130 470.3 408 60.5
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 4.5e-130 468.8 412 59.0
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 3.8e-129 465.7 403 60.0
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 5.0e-129 465.3 403 59.8
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 6.5e-129 464.9 405 61.0
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 2.5e-128 463.0 403 59.6
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 2.5e-128 463.0 404 60.1
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 2.5e-128 463.0 404 60.1
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 2.5e-128 463.0 403 60.0
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 5.5e-128 461.8 412 58.3
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 1.2e-127 460.7 412 58.3
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 3.0e-126 456.1 413 57.9
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 6.7e-126 454.9 412 57.5
Lj2C445T15 Lonicera japonica HOM05D003845 ORTHO05D004161 1.7e-124 450.3 403 59.3
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 1.7e-124 450.3 403 57.8
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 2.4e-123 446.4 523 49.1
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 2.0e-122 443.4 413 58.1
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 4.5e-122 442.2 413 56.9
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 1.6e-119 433.7 402 58.2
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 2.1e-119 433.3 441 53.7
ClCG11G005430 Citrullus lanatus HOM05D003845 ORTHO05D004161 1.1e-117 427.6 361 61.2
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 4.5e-114 415.6 389 56.0
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 2.5e-112 409.8 414 51.7
ATR0564G289 Amborella trichopoda HOM05D003845 ORTHO05D004161 7.2e-112 408.3 292 70.5
unitig_899.g14510 Utricularia gibba HOM05D003845 ORTHO05D004161 2.6e-106 389.8 399 53.9
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 2.3e-102 376.7 404 50.5
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 1.8e-99 367.1 358 55.6
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 1.0e-97 361.3 414 51.0
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 1.3e-89 334.3 287 62.0
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 8.3e-84 315.1 349 50.4
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 7.3e-80 302.0 251 61.4
Rhsim09G0080700 Rhododendron simsii HOM05D003845 ORTHO05D004161 5.6e-72 275.8 338 49.7
EL10Ac2g04610 Beta vulgaris HOM05D003845 ORTHO05D004161 1.7e-68 264.2 286 52.4
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 1.6e-66 257.7 522 34.7
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 1.4e-59 234.6 412 36.7
RcHm_v2.0_Chr2g0163391 Rosa chinensis HOM05D003845 ORTHO05D004161 4.3e-56 223.0 263 48.3
CAN.G625.3 Capsicum annuum HOM05D003845 ORTHO05D004161 3.5e-50 203.4 162 62.3
Haze_14141 Corylus avellana HOM05D003845 ORTHO05D004161 1.3e-41 174.9 129 69.0
Cpa.g.sc179.9 Carica papaya HOM05D003845 ORTHO05D004161 8.7e-41 172.2 119 70.6
QL02p051676 Quercus lobata HOM05D003845 ORTHO05D004161 1.4e-38 164.9 124 65.3
Actinidia15875 Actinidia chinensis HOM05D003845 ORTHO05D004161 9.9e-37 158.7 115 67.8
Lsat_1_v5_gn_4_153641 Lactuca sativa HOM05D003845 ORTHO05D004161 5.6e-32 142.9 123 63.4
Cre16.g684100 Chlamydomonas reinhardtii HOM05D003845 ORTHO05D004161 5.1e-25 119.8 444 25.7
Pp3c9_4980 Physcomitrium patens HOM05D003845 ORTHO05D004161 2.5e-16 90.9 117 47.0
PRCOL_00002157 Prasinoderma coloniale HOM05D003845 ORTHO05D004161 1.6e-15 88.2 373 25.2
arahy.Tifrunner.gnm1.ann1.57NG5G Arachis hypogaea HOM05D003845 ORTHO05D004161 3.8e-12 77.0 89 48.3
COL.COLO4_16180 Corchorus olitorius HOM05D003845 ORTHO05D004161 6.5e-12 76.3 45 80.0
arahy.Tifrunner.gnm1.ann1.395ZIT Arachis hypogaea HOM05D003845 ORTHO05D004161 8.5e-12 75.9 54 64.8
RcHm_v2.0_Chr2g0123031 Rosa chinensis HOM05D003845 ORTHO05D004161 3.9e-09 67.0 70 55.7
Actinidia17348 Actinidia chinensis HOM05D003226 ORTHO05D015784 6.7e-09 66.2 57 57.9
Actinidia17345 Actinidia chinensis HOM05D003845 ORTHO05D004161 1.5e-08 65.1 45 71.1
Lsat_1_v5_gn_1_87981 Lactuca sativa HOM05D003845 ORTHO05D004161 2.5e-08 64.3 46 58.7
Hund04285 Selenicereus undatus HOM05D003845 ORTHO05D004161 2.2e-07 61.2 99 40.4
ClCG11G005420 Citrullus lanatus HOM05D003845 ORTHO05D004161 8.2e-07 59.3 36 75.0
MBI02_g02968_MAGBIO Magnolia biondii HOM05D003845 ORTHO05D004161 1.1e-06 58.9 53 60.4


User provided reference genes

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