Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40191 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 1.2e-58 229.6 113 100.0
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 3.7e-47 191.4 111 83.8
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 8.1e-10 67.4 52 59.6
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 5.2e-09 64.7 77 45.5
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 1.5e-08 63.2 94 38.3
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 2.0e-08 62.8 104 36.5
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 2.0e-08 62.8 54 61.1
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 3.4e-08 62.0 54 61.1
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 5.8e-08 61.2 76 42.1
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 7.5e-08 60.8 47 63.8
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 7.5e-08 60.8 57 54.4
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 7.5e-08 60.8 71 47.9
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 9.9e-08 60.5 52 55.8
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 9.9e-08 60.5 51 56.9
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 9.9e-08 60.5 50 54.0
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 1.3e-07 60.1 52 51.9
unitig_747.g21316 Utricularia gibba HOM05D002839 ORTHO05D003349 1.3e-07 60.1 51 54.9
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 1.7e-07 59.7 49 61.2
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 1.7e-07 59.7 51 56.9
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 2.2e-07 59.3 49 59.2
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 2.9e-07 58.9 103 38.8
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 4.9e-07 58.2 46 60.9
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 4.9e-07 58.2 49 59.2
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 4.9e-07 58.2 57 50.9
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 8.3e-07 57.4 46 60.9
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 8.3e-07 57.4 52 53.8
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 1.1e-06 57.0 50 54.0
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 1.4e-06 56.6 59 49.2
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 1.4e-06 56.6 45 64.4
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 1.4e-06 56.6 53 58.5
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 1.9e-06 56.2 45 55.6
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 1.9e-06 56.2 51 51.0
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 1.9e-06 56.2 90 35.6
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 1.9e-06 56.2 53 52.8
HPP92_021579 Vanilla planifolia HOM05D007228 ORTHO05D009099 1.9e-06 56.2 51 54.9
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 1.9e-06 56.2 50 50.0
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 3.2e-06 55.5 48 54.2
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 3.2e-06 55.5 90 34.4
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 3.2e-06 55.5 50 48.0
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 4.1e-06 55.1 51 49.0
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 5.4e-06 54.7 57 54.4
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 5.4e-06 54.7 48 50.0
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 5.4e-06 54.7 48 56.2
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 5.4e-06 54.7 48 56.2
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 5.4e-06 54.7 51 52.9
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 7.1e-06 54.3 47 53.2
SMO119G0281 Selaginella moellendorffii HOM05D007228 ORTHO05D009099 7.1e-06 54.3 124 32.3
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 9.2e-06 53.9 53 49.1
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 9.2e-06 53.9 54 44.4
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 9.2e-06 53.9 54 44.4
PGSC0003DMG400014227 Solanum tuberosum HOM05D007228 ORTHO05D009099 9.2e-06 53.9 48 47.9


User provided reference genes

Program Settings