Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 2.0e-80 302.4 153 100.0
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 9.2e-33 144.1 115 70.4
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 9.2e-33 144.1 136 64.0
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 7.8e-32 141.0 116 69.8
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.3e-31 140.2 115 72.2
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 1.3e-31 140.2 146 58.9
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 1.7e-31 139.8 81 87.7
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 3.9e-31 138.7 96 78.1
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.9e-31 138.7 161 57.1
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 3.9e-31 138.7 113 69.0
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 5.0e-31 138.3 76 92.1
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 6.6e-31 137.9 113 71.7
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 8.6e-31 137.5 141 60.3
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 1.5e-30 136.7 165 54.5
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 1.5e-30 136.7 120 65.0
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 1.9e-30 136.3 89 80.9
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 1.9e-30 136.3 115 64.3
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.9e-30 136.3 113 70.8
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 1.9e-30 136.3 154 56.5
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 2.5e-30 136.0 77 90.9
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 2.5e-30 136.0 113 68.1
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 2.5e-30 136.0 111 68.5
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.5e-30 136.0 80 88.8
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.5e-30 136.0 147 57.8
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 2.5e-30 136.0 136 59.6
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 2.5e-30 136.0 154 57.1
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 3.3e-30 135.6 78 88.5
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 3.3e-30 135.6 79 87.3
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 4.3e-30 135.2 153 56.2
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 4.3e-30 135.2 111 66.7
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 4.3e-30 135.2 111 64.9
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 4.3e-30 135.2 149 56.4
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 4.3e-30 135.2 113 67.3
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 4.3e-30 135.2 131 61.1
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 5.6e-30 134.8 113 69.0
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 5.6e-30 134.8 111 66.7
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 5.6e-30 134.8 83 85.5
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 5.6e-30 134.8 140 59.3
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 7.3e-30 134.4 112 70.5
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 7.3e-30 134.4 113 68.1
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 7.3e-30 134.4 110 70.9
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 9.5e-30 134.0 90 77.8
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 1.2e-29 133.7 161 54.0
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 1.2e-29 133.7 110 69.1
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.2e-29 133.7 117 67.5
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.6e-29 133.3 133 60.9
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.6e-29 133.3 113 68.1
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 1.6e-29 133.3 117 67.5
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 2.1e-29 132.9 111 66.7
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.1e-29 132.9 113 68.1
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.1e-29 132.9 113 68.1
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 2.1e-29 132.9 146 56.8
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 2.1e-29 132.9 113 68.1
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 2.8e-29 132.5 145 57.2
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 3.6e-29 132.1 112 65.2
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 3.6e-29 132.1 82 84.1
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 3.6e-29 132.1 82 84.1
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 3.6e-29 132.1 82 84.1
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 3.6e-29 132.1 82 84.1
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 3.6e-29 132.1 82 84.1
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 3.6e-29 132.1 114 69.3
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 3.6e-29 132.1 149 56.4
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 3.6e-29 132.1 139 57.6
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 4.7e-29 131.7 80 86.2
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 4.7e-29 131.7 80 86.2
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 4.7e-29 131.7 80 86.2
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 4.7e-29 131.7 80 86.2
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 4.7e-29 131.7 79 86.1
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.7e-29 131.7 113 67.3
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 6.2e-29 131.3 79 86.1
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 6.2e-29 131.3 117 67.5
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 6.2e-29 131.3 77 88.3
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 8.0e-29 131.0 130 60.0
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 8.0e-29 131.0 77 87.0
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 1.0e-28 130.6 129 61.2
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 1.0e-28 130.6 111 64.9
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 1.0e-28 130.6 111 64.9
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.4e-28 130.2 72 91.7
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 1.4e-28 130.2 126 61.9
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 1.8e-28 129.8 111 64.9
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 3.1e-28 129.0 113 64.6
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 4.0e-28 128.6 77 85.7
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 4.0e-28 128.6 113 64.6
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 4.0e-28 128.6 80 83.8
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 5.2e-28 128.3 152 55.3
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 6.8e-28 127.9 110 66.4
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 6.8e-28 127.9 82 82.9
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 6.8e-28 127.9 111 64.9
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 6.8e-28 127.9 114 65.8
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 6.8e-28 127.9 149 53.7
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 8.9e-28 127.5 110 67.3
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 1.2e-27 127.1 77 85.7
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 1.2e-27 127.1 77 85.7
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 2.0e-27 126.3 76 85.5
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 4.4e-27 125.2 135 57.8
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 4.4e-27 125.2 76 84.2
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 5.8e-27 124.8 82 81.7
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.3e-26 123.6 77 83.1
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 3.7e-26 122.1 128 58.6
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 6.4e-26 121.3 73 84.9
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 4.1e-25 118.6 82 76.8
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 4.1e-25 118.6 99 68.7
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 3.5e-24 115.5 68 88.2
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.3e-23 113.6 67 88.1
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 4.3e-22 108.6 128 52.3
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 1.6e-21 106.7 113 56.6
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 4.7e-21 105.1 146 47.3
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 3.1e-20 102.4 120 55.0
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 3.4e-19 99.0 62 80.6
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 4.4e-19 98.6 91 63.7
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 1.7e-18 96.7 108 51.9
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 2.2e-18 96.3 106 56.6
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.1e-17 94.0 121 49.6
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.4e-17 93.6 80 66.2
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 2.1e-16 89.7 61 78.7
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 7.8e-16 87.8 56 80.4
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 3.0e-15 85.9 104 51.0
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 3.0e-15 85.9 121 48.8
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 6.2e-13 78.2 155 37.4
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 1.5e-11 73.6 103 44.7
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 1.4e-09 67.0 78 51.3
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 1.6e-08 63.5 51 72.5
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.0e-07 60.8 37 81.1
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 2.3e-07 59.7 61 49.2
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 1.9e-06 56.6 69 44.9


User provided reference genes

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