Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 5.7e-200 700.7 342 100.0
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 1.3e-106 390.6 325 60.6
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 3.7e-106 389.0 324 61.1
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 2.7e-101 372.9 236 72.0
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 6.0e-101 371.7 186 99.5
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 1.3e-100 370.5 300 59.3
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 1.8e-100 370.2 283 63.6
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 2.3e-100 369.8 317 59.3
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 2.3e-100 369.8 260 67.3
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 8.7e-100 367.9 267 65.5
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 2.5e-99 366.3 320 56.9
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 3.3e-99 365.9 311 57.6
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 4.3e-99 365.5 262 64.1
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 4.3e-99 365.5 268 63.4
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 5.7e-99 365.2 265 66.0
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 7.4e-99 364.8 236 69.5
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 1.3e-98 364.0 262 66.4
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 1.6e-98 363.6 267 62.9
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 3.7e-98 362.5 257 65.4
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 1.1e-97 360.9 237 69.6
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 1.1e-97 360.9 325 56.3
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 1.1e-97 360.9 238 68.1
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.4e-97 360.5 301 59.1
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 2.4e-97 359.8 320 57.2
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 2.4e-97 359.8 318 56.9
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 4.1e-97 359.0 308 59.4
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 4.1e-97 359.0 259 65.3
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 4.1e-97 359.0 263 63.5
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 6.9e-97 358.2 229 72.1
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 1.2e-96 357.5 254 66.1
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 1.2e-96 357.5 316 56.3
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 2.0e-96 356.7 296 58.8
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 2.6e-96 356.3 258 65.9
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 2.6e-96 356.3 237 67.5
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 2.6e-96 356.3 288 60.4
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 3.4e-96 355.9 310 59.4
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 5.9e-96 355.1 303 59.1
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 1.0e-95 354.4 273 61.9
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 1.0e-95 354.4 245 65.7
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 2.2e-95 353.2 262 64.5
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 3.8e-95 352.4 310 57.7
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 8.5e-95 351.3 240 68.8
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 3.2e-94 349.4 303 59.1
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 7.2e-94 348.2 245 64.5
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 6.1e-93 345.1 222 69.4
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 2.3e-92 343.2 239 66.9
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 3.9e-92 342.4 250 62.8
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 6.7e-92 341.7 286 59.1
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 8.8e-92 341.3 260 63.5
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 1.1e-91 340.9 217 73.3
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.1e-91 340.9 222 68.9
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 1.5e-91 340.5 220 70.5
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 9.7e-91 337.8 265 62.6
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 3.7e-90 335.9 207 72.0
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 6.3e-90 335.1 222 69.4
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.4e-89 334.0 239 65.3
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 2.6e-88 329.7 270 61.1
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 4.5e-88 328.9 225 65.8
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 7.7e-88 328.2 268 57.8
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 7.7e-88 328.2 225 66.2
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 7.7e-88 328.2 255 60.8
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 1.7e-87 327.0 332 51.2
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 2.9e-87 326.2 263 57.8
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 2.9e-87 326.2 256 59.0
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 5.0e-87 325.5 294 53.4
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 1.1e-86 324.3 259 58.3
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 1.9e-86 323.6 256 58.6
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 1.9e-86 323.6 256 58.6
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 2.5e-86 323.2 259 57.9
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 3.2e-86 322.8 256 58.6
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 4.2e-86 322.4 258 58.1
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 4.2e-86 322.4 341 52.2
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 7.2e-86 321.6 311 52.7
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 2.1e-85 320.1 322 50.3
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 1.0e-84 317.8 222 64.0
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 4.4e-83 312.4 228 63.6
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 5.7e-83 312.0 213 68.5
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 9.7e-83 311.2 329 49.5
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 2.8e-82 309.7 405 44.0
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 6.3e-82 308.5 281 57.3
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 2.0e-80 303.5 215 66.5
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 4.2e-78 295.8 219 61.6
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 1.0e-76 291.2 217 61.3
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 1.4e-76 290.8 215 63.3
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 1.4e-76 290.8 197 67.5
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.3e-75 286.2 279 52.3
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.3e-75 286.2 279 52.3
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 1.7e-74 283.9 200 64.5
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 3.7e-74 282.7 229 55.9
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 1.2e-72 277.7 222 58.6
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 1.6e-72 277.3 264 52.3
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 2.2e-71 273.5 174 70.1
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 1.4e-68 264.2 227 55.5
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 3.7e-66 256.1 186 66.1
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 3.8e-63 246.1 307 45.0
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 8.5e-63 245.0 167 67.1
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 1.1e-62 244.6 227 56.8
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 2.5e-62 243.4 225 49.8
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 3.2e-62 243.0 231 52.4
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 5.5e-62 242.3 209 54.1
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.7e-61 239.2 172 65.1
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 7.0e-57 225.3 258 47.7
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 1.6e-56 224.2 229 50.2
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 1.0e-55 221.5 147 72.1
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 3.4e-51 206.5 306 39.2
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 9.8e-43 178.3 227 37.9
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.1e-33 148.3 146 51.4
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 8.3e-26 122.1 95 57.9
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.2e-25 120.2 95 56.8
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.6e-24 117.9 83 65.1
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 2.5e-22 110.5 167 44.3
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 1.1e-12 78.6 45 71.1
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 3.0e-07 60.5 39 69.2
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 3.9e-07 60.1 90 34.4


User provided reference genes

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