Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 4.4e-225 784.3 389 100.0
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 4.9e-147 525.0 354 72.9
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.2e-145 520.4 359 70.5
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.2e-145 520.4 352 72.2
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 1.6e-145 520.0 347 73.8
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 4.5e-145 518.5 363 70.2
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 5.9e-145 518.1 347 73.8
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 1.0e-144 517.3 359 69.9
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 2.3e-144 516.2 393 65.6
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 8.6e-144 514.2 407 64.4
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 1.1e-143 513.8 392 67.1
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.1e-143 513.8 376 67.8
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 1.5e-143 513.5 358 70.4
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 1.5e-143 513.5 370 69.5
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.5e-143 513.5 346 72.8
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 1.5e-143 513.5 346 71.1
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.9e-143 513.1 393 65.4
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 2.5e-143 512.7 370 69.7
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 3.3e-143 512.3 352 71.0
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 3.3e-143 512.3 352 72.2
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 3.3e-143 512.3 346 71.4
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 4.3e-143 511.9 352 70.2
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 4.3e-143 511.9 347 71.2
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 5.6e-143 511.5 340 72.9
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 7.3e-143 511.1 346 72.8
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 9.5e-143 510.8 359 69.1
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 1.2e-142 510.4 340 71.8
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.2e-142 510.4 346 72.3
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 1.6e-142 510.0 361 70.1
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 2.1e-142 509.6 356 71.1
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.1e-142 509.6 346 72.8
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 4.7e-142 508.4 358 69.6
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 6.1e-142 508.1 344 71.8
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 6.1e-142 508.1 381 66.4
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 6.1e-142 508.1 360 69.4
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 8.0e-142 507.7 350 71.7
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 8.0e-142 507.7 350 70.3
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 8.0e-142 507.7 338 71.9
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 8.0e-142 507.7 352 71.6
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 1.0e-141 507.3 363 69.1
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 1.0e-141 507.3 360 69.4
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.4e-141 506.9 341 73.6
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 2.3e-141 506.1 382 67.3
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 2.3e-141 506.1 363 68.6
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 3.1e-141 505.8 351 70.7
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 3.1e-141 505.8 354 70.3
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 4.0e-141 505.4 352 70.7
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 4.0e-141 505.4 346 70.8
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 5.2e-141 505.0 353 70.3
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 8.9e-141 504.2 360 70.0
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 8.9e-141 504.2 349 72.2
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 1.2e-140 503.8 330 73.3
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 1.5e-140 503.4 351 70.4
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 1.5e-140 503.4 363 68.3
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 1.5e-140 503.4 380 66.1
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 3.4e-140 502.3 346 71.1
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 3.4e-140 502.3 396 64.6
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 4.4e-140 501.9 385 64.7
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 5.8e-140 501.5 339 72.0
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 5.8e-140 501.5 358 69.3
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 5.8e-140 501.5 330 74.2
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 7.5e-140 501.1 332 73.8
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 7.5e-140 501.1 340 71.2
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 9.8e-140 500.7 352 70.2
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 9.8e-140 500.7 340 71.8
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 2.2e-139 499.6 352 69.9
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 2.2e-139 499.6 381 66.4
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 4.9e-139 498.4 352 69.6
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.1e-138 497.3 346 69.9
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 1.1e-138 497.3 355 69.6
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 1.1e-138 497.3 350 69.4
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 2.4e-138 496.1 330 73.0
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 3.2e-138 495.7 347 70.6
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 5.4e-138 495.0 352 69.9
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 5.4e-138 495.0 327 73.7
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 7.0e-138 494.6 350 69.1
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 1.2e-137 493.8 350 70.3
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.2e-137 493.8 339 71.1
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 2.7e-137 492.7 357 68.3
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 6.0e-137 491.5 330 71.5
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 1.3e-136 490.3 340 71.2
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 1.7e-136 490.0 365 66.3
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 2.3e-136 489.6 387 64.3
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 5.0e-136 488.4 339 69.9
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 5.0e-136 488.4 339 70.2
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 8.6e-136 487.6 338 70.4
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.5e-135 486.9 338 70.1
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 4.3e-135 485.3 346 70.5
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 4.3e-135 485.3 339 69.3
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 9.5e-135 484.2 327 71.9
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 1.6e-134 483.4 340 70.3
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 2.8e-134 482.6 319 73.0
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 6.2e-134 481.5 338 69.5
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 8.0e-134 481.1 338 70.4
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 6.8e-133 478.0 369 66.7
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 2.0e-132 476.5 359 66.9
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 2.6e-132 476.1 341 68.3
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 2.6e-132 476.1 416 60.3
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 4.9e-131 471.9 351 67.0
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 2.4e-130 469.5 346 65.9
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 3.4e-124 449.1 307 72.3
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 4.4e-124 448.7 323 69.0
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 5.8e-124 448.4 374 62.0
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 1.5e-116 423.7 330 65.5
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 8.7e-112 407.9 353 60.3
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 6.2e-110 401.7 329 60.5
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 8.1e-110 401.4 326 62.9
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 7.8e-105 384.8 360 58.1
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 1.1e-101 374.4 352 58.2
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 4.9e-99 365.5 344 53.2
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 1.4e-98 364.0 399 49.4
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.9e-90 337.0 327 54.7
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 1.9e-87 327.0 239 68.2
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 2.8e-86 323.2 239 67.8
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 2.8e-86 323.2 294 58.5
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.2e-84 317.8 369 46.6
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 3.4e-84 316.2 228 68.4
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 4.5e-84 315.8 244 63.9
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 2.6e-63 246.9 255 47.5
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 5.0e-59 232.6 165 67.9
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 2.5e-50 203.8 185 60.0
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 4.4e-47 193.0 192 54.2
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 5.7e-39 166.0 119 68.9
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 4.0e-32 143.3 163 50.3
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 3.7e-14 83.6 128 43.0
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 4.1e-13 80.1 89 52.8
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 4.1e-13 80.1 89 52.8
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 1.8e-08 64.7 35 77.1


User provided reference genes

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