Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40120 Sequoiadendron giganteum HOM05D004478 ORTHO05D007440 4.5e-294 1013.8 512 100.0
ATR0829G158 Amborella trichopoda HOM05D004478 ORTHO05D007440 1.6e-102 377.5 338 58.3
COL.COLO4_12522 Corchorus olitorius HOM05D004478 ORTHO05D007440 1.8e-101 374.0 342 55.8
Actinidia12243 Actinidia chinensis HOM05D004478 ORTHO05D007440 2.4e-101 373.6 341 56.9
Nn6g34058 Nelumbo nucifera HOM05D004478 ORTHO05D007440 2.4e-101 373.6 340 57.1
Duzib213G0292 Durio zibethinus HOM05D004478 ORTHO05D007440 6.9e-101 372.1 343 54.5
Gohir.D05G336900 Gossypium hirsutum HOM05D004478 ORTHO05D007440 1.5e-100 370.9 340 54.7
Gorai.009G361000 Gossypium raimondii HOM05D004478 ORTHO05D007440 2.0e-100 370.5 340 55.0
PSO782G0861 Papaver somniferum HOM05D004478 ORTHO05D007440 3.4e-100 369.8 343 56.3
Ciclev10018542m.g Citrus clementina HOM05D004478 ORTHO05D007440 5.9e-100 369.0 343 57.4
Gohir.A04G045800 Gossypium hirsutum HOM05D004478 ORTHO05D007440 7.7e-100 368.6 340 54.4
Ah.05g174780 Amaranthus hybridus HOM05D004478 ORTHO05D007440 3.8e-99 366.3 337 56.4
Dinv43687 Davidia involucrata HOM05D004478 ORTHO05D007440 8.5e-99 365.2 348 56.9
Lj5g0020792 Lotus japonicus HOM05D004478 ORTHO05D007440 8.5e-99 365.2 344 55.5
SalBow5G5434 Salvia bowleyana HOM05D004478 ORTHO05D007440 8.5e-99 365.2 337 54.9
SGA_v2.0_scaffold43G16502 Striga asiatica HOM05D004478 ORTHO05D007440 8.5e-99 365.2 347 55.6
Lj9C568G3 Lonicera japonica HOM05D004478 ORTHO05D007440 2.5e-98 363.6 335 57.6
Glyma.10G279100 Glycine max HOM05D004478 ORTHO05D007440 4.2e-98 362.8 343 54.5
Glyma.20G110600 Glycine max HOM05D004478 ORTHO05D007440 4.2e-98 362.8 343 54.8
arahy.Tifrunner.gnm1.ann1.R3KQ80 Arachis hypogaea HOM05D004478 ORTHO05D007440 5.5e-98 362.5 344 55.2
Haze_02653 Corylus avellana HOM05D004478 ORTHO05D007440 5.5e-98 362.5 337 54.3
VMungo0720G2491 Vigna mungo HOM05D004478 ORTHO05D007440 5.5e-98 362.5 345 54.8
CSS0018497 Camellia sinensis var. sinensis HOM05D004478 ORTHO05D007440 7.2e-98 362.1 341 56.6
AUR62013659 Chenopodium quinoa HOM05D004478 ORTHO05D007440 7.2e-98 362.1 334 56.6
Thecc.01G379300 Theobroma cacao HOM05D004478 ORTHO05D007440 9.4e-98 361.7 335 54.3
Cfa011194 Carpinus fangiana HOM05D004478 ORTHO05D007440 2.7e-97 360.1 343 53.6
CiPaw.14G027200 Carya illinoinensis HOM05D004478 ORTHO05D007440 2.7e-97 360.1 343 54.5
vmacro13419 Vaccinium macrocarpon HOM05D004478 ORTHO05D007440 4.6e-97 359.4 343 53.6
Atru.chr5.277 Acer truncatum HOM05D004478 ORTHO05D007440 6.1e-97 359.0 338 54.4
MD07G1008800 Malus domestica HOM05D004478 ORTHO05D007440 6.1e-97 359.0 337 55.2
TPR.G2420 Trifolium pratense HOM05D004478 ORTHO05D007440 7.9e-97 358.6 344 54.4
Aqoxy7G00707 Aquilegia oxysepala HOM05D004478 ORTHO05D007440 2.3e-96 357.1 343 56.3
Prupe.2G141700 Prunus persica HOM05D004478 ORTHO05D007440 2.3e-96 357.1 344 54.4
Os10g0508500 Oryza sativa ssp. japonica HOM05D004478 ORTHO05D007440 3.9e-96 356.3 340 54.4
QL04p040018 Quercus lobata HOM05D004478 ORTHO05D007440 3.9e-96 356.3 340 53.8
Rhsim07G0029300 Rhododendron simsii HOM05D004478 ORTHO05D007440 3.9e-96 356.3 341 53.7
Hund27372 Selenicereus undatus HOM05D004478 ORTHO05D007440 3.9e-96 356.3 337 55.8
Phvul.007G022200 Phaseolus vulgaris HOM05D004478 ORTHO05D007440 6.7e-96 355.5 343 53.9
EL10Ac1g00864 Beta vulgaris HOM05D004478 ORTHO05D007440 8.8e-96 355.1 337 56.1
Lalb_Chr02g0146291 Lupinus albus HOM05D004478 ORTHO05D007440 8.8e-96 355.1 340 55.3
MD02G1313300 Malus domestica HOM05D004478 ORTHO05D007440 8.8e-96 355.1 341 54.5
Sc02g0002670 Simmondsia chinensis HOM05D004478 ORTHO05D007440 8.8e-96 355.1 338 55.9
ClCG06G000530 Citrullus lanatus HOM05D004478 ORTHO05D007440 1.1e-95 354.8 342 57.0
GSVIVG01027657001 Vitis vinifera HOM05D004478 ORTHO05D007440 1.5e-95 354.4 337 56.4
arahy.Tifrunner.gnm1.ann1.MXE7NW Arachis hypogaea HOM05D004478 ORTHO05D007440 2.6e-95 353.6 363 52.6
arahy.Tifrunner.gnm1.ann1.W3JVU2 Arachis hypogaea HOM05D004478 ORTHO05D007440 3.3e-95 353.2 344 53.5
arahy.Tifrunner.gnm1.ann1.ZTQI5E Arachis hypogaea HOM05D004478 ORTHO05D007440 3.3e-95 353.2 344 53.2
MELO3C022488.2 Cucumis melo HOM05D004478 ORTHO05D007440 3.3e-95 353.2 345 55.9
CsaV3_6G006310 Cucumis sativus L. HOM05D004478 ORTHO05D007440 3.3e-95 353.2 345 56.8
Manes.05G047400 Manihot esculenta HOM05D004478 ORTHO05D007440 4.4e-95 352.8 337 57.0
Nitab4.5_0000252g0220 Nicotiana tabacum HOM05D004478 ORTHO05D007440 7.4e-95 352.1 341 54.0
Oeu064473.1 Olea europaea HOM05D004478 ORTHO05D007440 7.4e-95 352.1 353 55.0
THA.LOC104827612 Tarenaya hassleriana HOM05D004478 ORTHO05D007440 7.4e-95 352.1 332 56.3
FvH4_7g07690 Fragaria vesca HOM05D004478 ORTHO05D007440 9.7e-95 351.7 337 55.8
MBI04_g11448_MAGBIO Magnolia biondii HOM05D004478 ORTHO05D007440 9.7e-95 351.7 342 55.8
Solyc01g091080.3 Solanum lycopersicum HOM05D004478 ORTHO05D007440 9.7e-95 351.7 339 54.6
Sopen01g036830 Solanum pennellii HOM05D004478 ORTHO05D007440 9.7e-95 351.7 339 54.6
PGSC0003DMG400025966 Solanum tuberosum HOM05D004478 ORTHO05D007440 9.7e-95 351.7 339 54.9
Carub.0002s1114 Capsella rubella HOM05D004478 ORTHO05D007440 1.7e-94 350.9 339 54.6
CARHR171130 Cardamine hirsuta HOM05D004478 ORTHO05D007440 1.7e-94 350.9 339 54.9
Medtr1g112130 Medicago truncatula HOM05D004478 ORTHO05D007440 2.2e-94 350.5 345 52.8
FAN06G3638 Fragaria x ananassa HOM05D004478 ORTHO05D007440 2.8e-94 350.1 336 55.7
TWI59G0724 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 2.8e-94 350.1 345 52.2
DCAR_015895 Daucus carota HOM05D004478 ORTHO05D007440 3.7e-94 349.7 340 55.6
Thhalv10005754m.g Eutrema salsugineum HOM05D004478 ORTHO05D007440 3.7e-94 349.7 339 55.8
Nitab4.5_0010730g0030 Nicotiana tabacum HOM05D004478 ORTHO05D007440 3.7e-94 349.7 346 53.5
RcHm_v2.0_Chr1g0342581 Rosa chinensis HOM05D004478 ORTHO05D007440 4.8e-94 349.4 341 55.1
MSTRG.4901 Avicennia marina HOM05D004478 ORTHO05D007440 6.3e-94 349.0 339 53.7
Ca_25666_v3 Cicer arietinum L. HOM05D004478 ORTHO05D007440 6.3e-94 349.0 357 52.4
Nitab4.5_0000457g0060 Nicotiana tabacum HOM05D004478 ORTHO05D007440 6.3e-94 349.0 346 53.5
AL2G22100 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 8.2e-94 348.6 340 55.3
Sed0027727 Sechium edule HOM05D004478 ORTHO05D007440 8.2e-94 348.6 345 55.9
FAN10G0184 Fragaria x ananassa HOM05D004478 ORTHO05D007440 1.8e-93 347.4 337 55.2
Peaxi162Scf00013g02923 Petunia axillaris HOM05D004478 ORTHO05D007440 1.8e-93 347.4 346 53.5
PGR042G4004 Punica granatum HOM05D004478 ORTHO05D007440 1.8e-93 347.4 338 54.7
Zm00001eb220640 Zea mays HOM05D004478 ORTHO05D007440 4.1e-93 346.3 334 52.4
Cc02_g24170 Coffea canephora HOM05D004478 ORTHO05D007440 1.2e-92 344.7 338 53.3
Migut.N01621 Erythranthe guttata HOM05D004478 ORTHO05D007440 1.2e-92 344.7 337 54.0
TWI14G0506 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 2.6e-92 343.6 340 51.2
AT3G60740 Arabidopsis thaliana HOM05D004478 ORTHO05D007440 4.5e-92 342.8 339 54.9
Eucgr.E01450 Eucalyptus grandis HOM05D004478 ORTHO05D007440 4.5e-92 342.8 342 52.9
AL5G43050 Arabidopsis lyrata HOM05D004478 ORTHO05D007440 5.9e-92 342.4 340 55.6
ECA236G4615 Erigeron canadensis HOM05D004478 ORTHO05D007440 7.7e-92 342.0 341 54.8
HanXRQChr04g0122511 Helianthus annuus HOM05D004478 ORTHO05D007440 7.7e-92 342.0 341 54.5
Potri.014G067400 Populus trichocarpa HOM05D004478 ORTHO05D007440 1.3e-91 341.3 342 54.1
Lsat_1_v5_gn_7_9321 Lactuca sativa HOM05D004478 ORTHO05D007440 1.7e-91 340.9 334 54.2
Aa31LG10G14990 Aethionema arabicum HOM05D004478 ORTHO05D007440 3.8e-91 339.7 338 53.6
Sp5g02510 Schrenkiella parvula HOM05D004478 ORTHO05D007440 3.8e-91 339.7 339 54.3
Carub.0005s2747 Capsella rubella HOM05D004478 ORTHO05D007440 6.5e-91 339.0 339 53.4
Sabra14G0047400 Salix brachista HOM05D004478 ORTHO05D007440 1.1e-90 338.2 340 53.2
A04p01470 Brassica napus HOM05D004478 ORTHO05D007440 1.9e-90 337.4 339 53.7
BraA04t15865Z Brassica rapa HOM05D004478 ORTHO05D007440 1.9e-90 337.4 339 53.7
HPP92_014468 Vanilla planifolia HOM05D004478 ORTHO05D007440 4.2e-90 336.3 332 53.6
Pp3c2_18070 Physcomitrium patens HOM05D004478 ORTHO05D007440 5.5e-90 335.9 357 50.4
FAN03G2702 Fragaria x ananassa HOM05D004478 ORTHO05D007440 1.2e-89 334.7 367 50.7
BolC4t24748H Brassica oleracea HOM05D004478 ORTHO05D007440 7.9e-89 332.0 335 53.4
AUR62004186 Chenopodium quinoa HOM05D004478 ORTHO05D007440 1.0e-88 331.6 334 54.5
Psat6g230960 Pisum sativum HOM05D004478 ORTHO05D007440 3.0e-88 330.1 346 51.2
BcaC02g10175 Brassica carinata HOM05D004478 ORTHO05D007440 2.0e-87 327.4 335 52.8
C04p31950 Brassica napus HOM05D004478 ORTHO05D007440 2.0e-87 327.4 335 52.8
Mapoly0039s0061 Marchantia polymorpha HOM05D004478 ORTHO05D007440 3.3e-87 326.6 336 50.9
Cpa.g.sc145.17 Carica papaya HOM05D004478 ORTHO05D007440 1.3e-86 324.7 344 51.5
unitig_32.g11469 Utricularia gibba HOM05D004478 ORTHO05D007440 2.2e-86 323.9 345 48.1
SMO147G0207 Selaginella moellendorffii HOM05D004478 ORTHO05D007440 2.5e-82 310.5 336 48.8
CDE12G0470 Ceratophyllum demersum HOM05D004478 ORTHO05D007440 1.3e-78 298.1 252 59.9
SHI13530 Sapria himalayana HOM05D004478 ORTHO05D007440 1.1e-77 295.0 335 49.3
AagrBONN_evm.TU.Sc2ySwM_344.164 Anthoceros agrestis HOM05D004478 ORTHO05D007440 1.4e-77 294.7 345 47.5
SEGI_22295 Sequoiadendron giganteum HOM05D025984 ORTHO05D008953 4.4e-71 273.1 178 75.3
SEGI_06077 Sequoiadendron giganteum HOM05D025984 ORTHO05D008953 1.8e-69 267.7 176 75.0
Duzib213G0739 Durio zibethinus HOM05D004478 ORTHO05D007440 8.0e-65 252.3 278 50.0
CAN.G911.6 Capsicum annuum HOM05D004478 ORTHO05D007440 6.6e-59 232.6 322 45.7
SEGI_05741 Sequoiadendron giganteum HOM05D001816 ORTHO05D002001 3.9e-51 206.8 148 70.3
TWI14G0271 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 1.2e-47 195.3 189 48.7
TWI14G1129 Tripterygium wilfordii HOM05D004478 ORTHO05D007440 1.2e-47 195.3 189 48.7
SEGI_01809 Sequoiadendron giganteum HOM05D025984 ORTHO05D002001 1.4e-45 188.3 128 73.4
CBR_g24365 Chara braunii HOM05D004478 ORTHO05D007440 4.6e-44 183.3 314 36.9
Cre12.g490250 Chlamydomonas reinhardtii HOM05D004478 ORTHO05D007440 1.5e-42 178.3 327 34.6
MCO09G490 Micromonas commoda HOM05D004478 ORTHO05D007440 6.8e-40 169.5 378 32.3
CAN.G433.9 Capsicum annuum HOM05D004478 ORTHO05D007440 3.4e-39 167.2 189 48.7
CARHR186420 Cardamine hirsuta HOM05D004478 ORTHO05D007440 1.2e-36 158.7 162 55.6
PRCOL_00002890 Prasinoderma coloniale HOM05D004478 ORTHO05D007440 3.2e-29 134.0 299 34.8
AUR62044221 Chenopodium quinoa HOM05D004478 ORTHO05D007440 1.1e-24 119.0 139 48.2
SHI25190 Sapria himalayana HOM05D004478 ORTHO05D037525 3.3e-18 97.4 131 38.9
SEGI_33429 Sequoiadendron giganteum HOM05D025984 ORTHO05D009818 4.8e-17 93.6 75 61.3
SHI33403 Sapria himalayana HOM05D004478 ORTHO05D037525 5.8e-15 86.7 125 42.4
SEGI_35696 Sequoiadendron giganteum HOM05D003704 ORTHO05D005892 1.6e-12 78.6 170 26.5
SHI43043 Sapria himalayana HOM05D000957 ORTHO05D000754 3.0e-11 74.3 123 37.4
SHI07794 Sapria himalayana HOM05D004478 ORTHO05D037525 2.1e-09 68.2 116 37.9
SEGI_22732 Sequoiadendron giganteum HOM05D006949 ORTHO05D008621 2.1e-09 68.2 43 74.4
SEGI_35085 Sequoiadendron giganteum HOM05D007806 ORTHO05D009818 1.1e-08 65.9 43 67.4


User provided reference genes

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