Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40048 Sequoiadendron giganteum HOM05D005590 ORTHO05D007084 8.9e-75 283.5 140 100.0
PSO063G4664 Papaver somniferum HOM05D005590 ORTHO05D007084 1.7e-54 216.1 140 75.0
ATR0686G208 Amborella trichopoda HOM05D005590 ORTHO05D007084 3.0e-54 215.3 140 72.9
Zm00001eb118150 Zea mays HOM05D005590 ORTHO05D007084 5.1e-54 214.5 140 75.0
TAR629G0528 Trochodendron aralioides HOM05D005590 ORTHO05D007084 2.5e-53 212.2 140 74.3
Nn4g22391 Nelumbo nucifera HOM05D005590 ORTHO05D007084 3.3e-53 211.8 140 72.9
PSO782G2635 Papaver somniferum HOM05D005590 ORTHO05D007084 4.3e-53 211.5 140 72.9
CDE08G0401 Ceratophyllum demersum HOM05D005590 ORTHO05D007084 7.3e-53 210.7 140 73.6
Aqoxy5G03486 Aquilegia oxysepala HOM05D005590 ORTHO05D007084 6.2e-52 207.6 140 72.9
MSTRG.7987 Avicennia marina HOM05D005590 ORTHO05D007084 1.4e-51 206.5 140 68.6
PGR102G0567 Punica granatum HOM05D005590 ORTHO05D007084 1.4e-51 206.5 140 72.1
SMO117G0108 Selaginella moellendorffii HOM05D005590 ORTHO05D007084 1.8e-51 206.1 140 71.4
Phvul.001G260000 Phaseolus vulgaris HOM05D005590 ORTHO05D007084 2.3e-51 205.7 140 70.7
AagrBONN_evm.TU.Sc2ySwM_344.1264 Anthoceros agrestis HOM05D005590 ORTHO05D007084 3.1e-51 205.3 140 70.7
Ca_16478_v3 Cicer arietinum L. HOM05D005590 ORTHO05D007084 4.0e-51 204.9 140 71.4
BcaB05g24294 Brassica carinata HOM05D005590 ORTHO05D007084 5.2e-51 204.5 140 71.4
EL10Ac6g13455 Beta vulgaris HOM05D005590 ORTHO05D007084 1.2e-50 203.4 140 70.0
BcaC03g14846 Brassica carinata HOM05D005590 ORTHO05D007084 1.2e-50 203.4 140 70.7
Cc11_g16690 Coffea canephora HOM05D005590 ORTHO05D007084 1.5e-50 203.0 139 69.8
Potri.008G177900 Populus trichocarpa HOM05D005590 ORTHO05D007084 1.5e-50 203.0 140 70.7
Ah.03g133910 Amaranthus hybridus HOM05D005590 ORTHO05D007084 2.0e-50 202.6 140 70.0
Glyma.11G248700 Glycine max HOM05D005590 ORTHO05D007084 2.0e-50 202.6 140 70.0
QL03p054580 Quercus lobata HOM05D005590 ORTHO05D007084 2.0e-50 202.6 139 70.5
Sp5g22560 Schrenkiella parvula HOM05D005590 ORTHO05D007084 3.4e-50 201.8 140 70.0
Peaxi162Scf00128g00942 Petunia axillaris HOM05D005590 ORTHO05D007084 4.4e-50 201.4 140 69.3
AT1G67550 Arabidopsis thaliana HOM05D005590 ORTHO05D007084 5.8e-50 201.1 140 70.0
arahy.Tifrunner.gnm1.ann1.F3MU0V Arachis hypogaea HOM05D005590 ORTHO05D007084 5.8e-50 201.1 140 70.0
arahy.Tifrunner.gnm1.ann1.T6FRZY Arachis hypogaea HOM05D005590 ORTHO05D007084 5.8e-50 201.1 140 70.0
Thhalv10018120m.g Eutrema salsugineum HOM05D005590 ORTHO05D007084 5.8e-50 201.1 140 70.0
Medtr3g085640 Medicago truncatula HOM05D005590 ORTHO05D007084 5.8e-50 201.1 140 70.7
Pp3c24_5050 Physcomitrium patens HOM05D005590 ORTHO05D007084 5.8e-50 201.1 140 72.1
CiPaw.05G113900 Carya illinoinensis HOM05D005590 ORTHO05D007084 7.6e-50 200.7 140 69.3
Ciclev10030703m.g Citrus clementina HOM05D005590 ORTHO05D007084 7.6e-50 200.7 140 69.3
MELO3C011884.2 Cucumis melo HOM05D005590 ORTHO05D007084 7.6e-50 200.7 140 70.0
DCAR_031184 Daucus carota HOM05D005590 ORTHO05D007084 7.6e-50 200.7 140 68.6
GSVIVG01010360001 Vitis vinifera HOM05D005590 ORTHO05D007084 7.6e-50 200.7 140 70.0
CsaV3_5G030450 Cucumis sativus L. HOM05D005590 ORTHO05D007084 9.9e-50 200.3 139 70.5
Lj6g0026097 Lotus japonicus HOM05D005590 ORTHO05D007084 9.9e-50 200.3 141 70.2
Lalb_Chr19g0126761 Lupinus albus HOM05D005590 ORTHO05D007084 9.9e-50 200.3 140 70.0
Oeu019045.1 Olea europaea HOM05D005590 ORTHO05D007084 1.3e-49 199.9 140 70.0
Solyc05g014970.3 Solanum lycopersicum HOM05D005590 ORTHO05D007084 1.3e-49 199.9 140 69.3
TWI36G0819 Tripterygium wilfordii HOM05D005590 ORTHO05D007084 1.3e-49 199.9 140 70.0
TWI36G1126 Tripterygium wilfordii HOM05D005590 ORTHO05D007084 1.3e-49 199.9 140 70.0
VMungo1383G1779 Vigna mungo HOM05D005590 ORTHO05D007084 1.3e-49 199.9 140 69.3
AL2G26220 Arabidopsis lyrata HOM05D005590 ORTHO05D007084 1.7e-49 199.5 140 69.3
Gohir.A04G138800 Gossypium hirsutum HOM05D005590 ORTHO05D007084 1.7e-49 199.5 140 67.9
Eucgr.B03469 Eucalyptus grandis HOM05D005590 ORTHO05D007084 2.2e-49 199.1 140 70.0
Gohir.D04G181700 Gossypium hirsutum HOM05D005590 ORTHO05D007084 2.2e-49 199.1 140 68.6
Gorai.012G175100 Gossypium raimondii HOM05D005590 ORTHO05D007084 2.2e-49 199.1 140 68.6
Hma1.2p1_1954F.1_g308890 Hydrangea macrophylla HOM05D005590 ORTHO05D007084 2.2e-49 199.1 140 69.3
SGA_v2.0_scaffold9G04769 Striga asiatica HOM05D005590 ORTHO05D007084 2.2e-49 199.1 140 67.9
TPR.G21797 Trifolium pratense HOM05D005590 ORTHO05D007084 2.2e-49 199.1 140 68.6
Migut.K00707 Erythranthe guttata HOM05D005590 ORTHO05D007084 2.9e-49 198.7 140 67.1
FvH4_4g24160 Fragaria vesca HOM05D005590 ORTHO05D007084 2.9e-49 198.7 139 71.2
RcHm_v2.0_Chr4g0430931 Rosa chinensis HOM05D005590 ORTHO05D007084 2.9e-49 198.7 139 69.8
AUR62005583 Chenopodium quinoa HOM05D005590 ORTHO05D007084 3.8e-49 198.4 140 69.3
AUR62024147 Chenopodium quinoa HOM05D005590 ORTHO05D007084 3.8e-49 198.4 140 68.6
Sopen05g010060 Solanum pennellii HOM05D005590 ORTHO05D007084 3.8e-49 198.4 140 68.6
vmacro16128 Vaccinium macrocarpon HOM05D005590 ORTHO05D007084 3.8e-49 198.4 140 69.3
Sed0016931 Sechium edule HOM05D005590 ORTHO05D007084 4.9e-49 198.0 140 69.3
THA.LOC104807889 Tarenaya hassleriana HOM05D005590 ORTHO05D007084 4.9e-49 198.0 140 68.6
THA.LOC104807890 Tarenaya hassleriana HOM05D005590 ORTHO05D007084 4.9e-49 198.0 140 68.6
THA.LOC104808470 Tarenaya hassleriana HOM05D005590 ORTHO05D007084 4.9e-49 198.0 140 68.6
Mapoly0026s0042 Marchantia polymorpha HOM05D005590 ORTHO05D007084 6.4e-49 197.6 140 67.1
Actinidia33250 Actinidia chinensis HOM05D005590 ORTHO05D007084 1.4e-48 196.4 140 67.9
CSS0010322 Camellia sinensis var. sinensis HOM05D005590 ORTHO05D007084 1.4e-48 196.4 140 70.0
Duzib248G1471 Durio zibethinus HOM05D005590 ORTHO05D007084 1.9e-48 196.1 140 67.1
CANSAT01G0321 Cannabis sativa HOM05D005590 ORTHO05D007084 3.2e-48 195.3 139 69.8
unitig_22.g6410 Utricularia gibba HOM05D005590 ORTHO05D007084 3.2e-48 195.3 140 66.4
CSS0021341 Camellia sinensis var. sinensis HOM05D005590 ORTHO05D007084 4.1e-48 194.9 140 69.3
Carub.0002s1389 Capsella rubella HOM05D005590 ORTHO05D007084 4.1e-48 194.9 140 68.6
CARHR060120 Cardamine hirsuta HOM05D005590 ORTHO05D007084 4.1e-48 194.9 140 68.6
SalBow2G1962 Salvia bowleyana HOM05D005590 ORTHO05D007084 4.1e-48 194.9 140 68.6
CAN.G1178.7 Capsicum annuum HOM05D005590 ORTHO05D007084 5.4e-48 194.5 140 66.4
Prupe.1G232300 Prunus persica HOM05D005590 ORTHO05D007084 7.1e-48 194.1 140 67.9
Cpa.g.sc43.29 Carica papaya HOM05D005590 ORTHO05D007084 9.2e-48 193.7 140 67.9
BolC2t08460H Brassica oleracea HOM05D005590 ORTHO05D007084 1.2e-47 193.4 146 66.4
Dinv10985 Davidia involucrata HOM05D005590 ORTHO05D007084 1.2e-47 193.4 140 67.9
Manes.13G016500 Manihot esculenta HOM05D005590 ORTHO05D007084 1.2e-47 193.4 140 65.0
Thecc.02G275300 Theobroma cacao HOM05D005590 ORTHO05D007084 1.6e-47 193.0 140 65.0
ECA234G4696 Erigeron canadensis HOM05D005590 ORTHO05D003891 2.1e-47 192.6 140 66.4
A02p14320 Brassica napus HOM05D005590 ORTHO05D007084 2.7e-47 192.2 146 65.8
BraA02t06492Z Brassica rapa HOM05D005590 ORTHO05D007084 3.5e-47 191.8 146 65.8
Cfa009321 Carpinus fangiana HOM05D005590 ORTHO05D007084 7.8e-47 190.7 140 68.6
FAN07G0306 Fragaria x ananassa HOM05D005590 ORTHO05D007084 7.8e-47 190.7 139 69.8
MD13G1114900 Malus domestica HOM05D005590 ORTHO05D007084 1.0e-46 190.3 140 67.9
Haze_12376 Corylus avellana HOM05D005590 ORTHO05D007084 1.7e-46 189.5 140 68.6
FAN12G4158 Fragaria x ananassa HOM05D005590 ORTHO05D007084 3.0e-46 188.7 139 69.1
Hund25444 Selenicereus undatus HOM05D005590 ORTHO05D007084 8.6e-46 187.2 140 66.4
Glyma.05G146000 Glycine max HOM05D005590 ORTHO05D007084 1.5e-45 186.4 140 66.4
Rhsim12G0104500 Rhododendron simsii HOM05D005590 ORTHO05D007084 1.5e-45 186.4 140 67.1
CBR_g46753 Chara braunii HOM05D005590 ORTHO05D007084 3.6e-44 181.8 140 64.3
MD13G1114500 Malus domestica HOM05D005590 ORTHO05D007084 8.9e-43 177.2 138 65.2
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 3.4e-42 175.3 138 61.6
Sed0012865 Sechium edule HOM05D005590 ORTHO05D007084 6.4e-41 171.0 140 62.1
ClCG11G013850 Citrullus lanatus HOM05D005590 ORTHO05D007084 4.2e-40 168.3 139 61.9
MCO04G019 Micromonas commoda HOM05D005590 ORTHO05D007084 3.5e-39 165.2 140 60.7
Aa31sc48G50 Aethionema arabicum HOM05D005590 ORTHO05D007084 3.3e-37 158.7 120 66.7
Sabra08G0135700 Salix brachista HOM05D005590 ORTHO05D007084 3.3e-37 158.7 123 65.0
Nitab4.5_0000240g0180 Nicotiana tabacum HOM05D005590 ORTHO05D007084 4.0e-35 151.8 140 55.0
Atru.chr11.2279 Acer truncatum HOM05D005590 ORTHO05D007084 5.3e-35 151.4 112 67.0
Nitab4.5_0003209g0020 Nicotiana tabacum HOM05D005590 ORTHO05D007084 1.2e-34 150.2 140 54.3
COL.COLO4_12817 Corchorus olitorius HOM05D005590 ORTHO05D007084 7.6e-34 147.5 140 52.1
Lj6C823G8 Lonicera japonica HOM05D005590 ORTHO05D007084 1.3e-33 146.7 140 55.0
Lsat_1_v5_gn_4_2961 Lactuca sativa HOM05D005590 ORTHO05D007084 5.4e-32 141.4 140 52.9
Sc11g0000610 Simmondsia chinensis HOM05D005590 ORTHO05D007084 4.2e-24 115.2 67 77.6
C02p23180 Brassica napus HOM05D005590 ORTHO05D007084 7.1e-24 114.4 66 78.8
HanXRQChr12g0385371 Helianthus annuus HOM05D005590 ORTHO05D007084 2.1e-23 112.8 66 77.3
FAN22G2048 Fragaria x ananassa HOM05D005590 ORTHO05D007084 1.3e-22 110.2 65 76.9
SHI17943 Sapria himalayana HOM05D005590 ORTHO05D007084 1.3e-20 103.6 63 71.4
TAR629G1224 Trochodendron aralioides HOM05D005590 ORTHO05D043575 1.6e-20 103.2 84 59.5
MD13G1114100 Malus domestica HOM05D005590 ORTHO05D007084 1.4e-19 100.1 155 43.9
Cfa009349 Carpinus fangiana HOM05D005590 ORTHO05D043575 2.7e-15 85.9 73 61.6
Cfa009347 Carpinus fangiana HOM05D005590 ORTHO05D007084 5.7e-13 78.2 43 79.1
MD16G1113300 Malus domestica HOM05D005590 ORTHO05D007084 4.1e-11 72.0 43 67.4
SHI17942 Sapria himalayana HOM05D000084 ORTHO05D002602 1.6e-07 60.1 49 61.2


User provided reference genes

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