Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39898 Sequoiadendron giganteum HOM05D005021 ORTHO05D006824 1.0e-296 1022.7 523 100.0
Nn7g38248 Nelumbo nucifera HOM05D005021 ORTHO05D006824 3.1e-149 532.7 532 53.8
TAR626G1325 Trochodendron aralioides HOM05D005021 ORTHO05D006824 4.5e-148 528.9 530 54.5
PSO675G8902 Papaver somniferum HOM05D005021 ORTHO05D006824 2.7e-145 519.6 532 53.4
GSVIVG01012103001 Vitis vinifera HOM05D005021 ORTHO05D006824 6.8e-144 515.0 530 53.0
COL.COLO4_17653 Corchorus olitorius HOM05D005021 ORTHO05D006824 2.0e-143 513.5 534 51.3
Ciclev10014047m.g Citrus clementina HOM05D005021 ORTHO05D006824 3.4e-143 512.7 535 52.1
Gohir.A01G141263 Gossypium hirsutum HOM05D005021 ORTHO05D006824 3.4e-143 512.7 529 52.7
CSS0004737 Camellia sinensis var. sinensis HOM05D005021 ORTHO05D006824 5.7e-143 511.9 531 52.5
ECA238G3003 Erigeron canadensis HOM05D005021 ORTHO05D006824 9.8e-143 511.1 527 52.4
MD05G1250500 Malus domestica HOM05D005021 ORTHO05D006824 1.3e-142 510.8 530 51.9
Gorai.002G164100 Gossypium raimondii HOM05D005021 ORTHO05D006824 2.8e-142 509.6 529 52.7
Sabra12G0094200 Salix brachista HOM05D005021 ORTHO05D006824 8.3e-142 508.1 531 52.4
Thecc.02G008800 Theobroma cacao HOM05D005021 ORTHO05D006824 1.1e-141 507.7 528 51.5
Gohir.D01G132500 Gossypium hirsutum HOM05D005021 ORTHO05D006824 1.8e-141 506.9 529 52.7
ClCG01G009560 Citrullus lanatus HOM05D005021 ORTHO05D006824 2.4e-141 506.5 527 52.2
Prupe.4G113100 Prunus persica HOM05D005021 ORTHO05D006824 2.4e-141 506.5 527 51.2
Lj1A1146G59 Lonicera japonica HOM05D005021 ORTHO05D006824 3.1e-141 506.1 531 52.0
Oeu060353.1 Olea europaea HOM05D005021 ORTHO05D006824 3.1e-141 506.1 526 51.3
Psat7g129680 Pisum sativum HOM05D005021 ORTHO05D006824 3.1e-141 506.1 528 50.9
Ca_18756_v3 Cicer arietinum L. HOM05D005021 ORTHO05D006824 5.4e-141 505.4 536 50.9
Potri.012G124400 Populus trichocarpa HOM05D005021 ORTHO05D006824 7.0e-141 505.0 532 52.4
HanXRQChr14g0447451 Helianthus annuus HOM05D005021 ORTHO05D006824 1.2e-140 504.2 527 52.2
QL11p016313 Quercus lobata HOM05D005021 ORTHO05D006824 1.2e-140 504.2 531 50.3
Haze_06074 Corylus avellana HOM05D005021 ORTHO05D006824 1.6e-140 503.8 533 50.7
Aqoxy1G01424 Aquilegia oxysepala HOM05D005021 ORTHO05D006824 2.0e-140 503.4 527 51.4
Eucgr.D00052 Eucalyptus grandis HOM05D005021 ORTHO05D006824 2.7e-140 503.1 536 51.3
FvH4_3g12410 Fragaria vesca HOM05D005021 ORTHO05D006824 3.5e-140 502.7 527 51.6
MELO3C021737.2 Cucumis melo HOM05D005021 ORTHO05D006824 4.5e-140 502.3 527 51.2
Sopen02g017890 Solanum pennellii HOM05D005021 ORTHO05D006824 5.9e-140 501.9 527 50.7
Cc09_g06010 Coffea canephora HOM05D005021 ORTHO05D006824 7.7e-140 501.5 533 52.0
CsaV3_1G046230 Cucumis sativus L. HOM05D005021 ORTHO05D006824 7.7e-140 501.5 526 51.3
MD10G1231300 Malus domestica HOM05D005021 ORTHO05D006824 7.7e-140 501.5 527 50.5
Atru.chr10.559 Acer truncatum HOM05D005021 ORTHO05D006824 1.0e-139 501.1 535 51.4
Cfa000703 Carpinus fangiana HOM05D005021 ORTHO05D006824 1.0e-139 501.1 533 50.7
RcHm_v2.0_Chr5g0020301 Rosa chinensis HOM05D005021 ORTHO05D006824 1.0e-139 501.1 527 51.6
Solyc02g068720.3 Solanum lycopersicum HOM05D005021 ORTHO05D006824 2.3e-139 500.0 527 50.5
Nitab4.5_0001288g0150 Nicotiana tabacum HOM05D005021 ORTHO05D006824 2.9e-139 499.6 526 51.1
CiPaw.10G064100 Carya illinoinensis HOM05D005021 ORTHO05D006824 3.8e-139 499.2 534 49.4
Glyma.20G019300 Glycine max HOM05D005021 ORTHO05D006824 1.1e-138 497.7 529 51.0
TPR.G38288 Trifolium pratense HOM05D005021 ORTHO05D006824 1.1e-138 497.7 528 50.2
CAN.G149.8 Capsicum annuum HOM05D005021 ORTHO05D006824 1.9e-138 496.9 529 51.2
Migut.M01986 Erythranthe guttata HOM05D005021 ORTHO05D006824 1.9e-138 496.9 533 51.0
Medtr4g084140 Medicago truncatula HOM05D005021 ORTHO05D006824 1.9e-138 496.9 529 51.0
FAN21G1452 Fragaria x ananassa HOM05D005021 ORTHO05D006824 3.3e-138 496.1 527 50.9
CANSAT35G0082 Cannabis sativa HOM05D005021 ORTHO05D006824 4.2e-138 495.7 533 50.1
PGR004G0612 Punica granatum HOM05D005021 ORTHO05D006824 5.5e-138 495.4 533 51.4
arahy.Tifrunner.gnm1.ann1.59QZXR Arachis hypogaea HOM05D005021 ORTHO05D006824 9.5e-138 494.6 531 49.9
arahy.Tifrunner.gnm1.ann1.79RC6W Arachis hypogaea HOM05D005021 ORTHO05D006824 9.5e-138 494.6 531 49.9
Nitab4.5_0007745g0040 Nicotiana tabacum HOM05D005021 ORTHO05D006824 9.5e-138 494.6 527 50.9
Lj4g0005220 Lotus japonicus HOM05D005021 ORTHO05D006824 1.2e-137 494.2 537 49.7
Potri.015G124500 Populus trichocarpa HOM05D005021 ORTHO05D006824 1.2e-137 494.2 528 52.3
Dinv25918 Davidia involucrata HOM05D005021 ORTHO05D006824 1.6e-137 493.8 532 50.9
Peaxi162Scf00149g00312 Petunia axillaris HOM05D005021 ORTHO05D006824 1.6e-137 493.8 527 50.3
Lalb_Chr16g0385181 Lupinus albus HOM05D005021 ORTHO05D006824 6.1e-137 491.9 530 50.2
Manes.16G055900 Manihot esculenta HOM05D005021 ORTHO05D006824 6.1e-137 491.9 535 50.3
SalBow8G3018 Salvia bowleyana HOM05D005021 ORTHO05D006824 6.1e-137 491.9 530 50.0
Sed0001856 Sechium edule HOM05D005021 ORTHO05D006824 6.1e-137 491.9 533 50.7
Mapoly0087s0075 Marchantia polymorpha HOM05D005021 ORTHO05D006824 2.3e-136 490.0 546 49.6
Potri.015G123900 Populus trichocarpa HOM05D005021 ORTHO05D006824 2.3e-136 490.0 528 52.1
THA.LOC104798554 Tarenaya hassleriana HOM05D005021 ORTHO05D006824 2.0e-135 486.9 535 48.8
VMungo0251G0795 Vigna mungo HOM05D005021 ORTHO05D006824 2.0e-135 486.9 535 49.9
Phvul.002G097500 Phaseolus vulgaris HOM05D005021 ORTHO05D006824 2.6e-135 486.5 532 49.1
Cpa.g.sc30.159 Carica papaya HOM05D005021 ORTHO05D006824 9.8e-135 484.6 530 50.2
TWI38G0923 Tripterygium wilfordii HOM05D005021 ORTHO05D006824 2.2e-134 483.4 529 49.9
C04p13730 Brassica napus HOM05D005021 ORTHO05D006824 8.3e-134 481.5 541 49.2
vmacro03526 Vaccinium macrocarpon HOM05D005021 ORTHO05D006824 8.3e-134 481.5 530 49.4
BraA05t20004Z Brassica rapa HOM05D005021 ORTHO05D006824 1.4e-133 480.7 541 48.8
TWI38G0776 Tripterygium wilfordii HOM05D005021 ORTHO05D006824 1.4e-133 480.7 528 50.6
BcaB02g09478 Brassica carinata HOM05D005021 ORTHO05D006824 1.8e-133 480.3 541 49.4
A05p10630 Brassica napus HOM05D005021 ORTHO05D006824 2.4e-133 479.9 540 48.9
DCAR_003775 Daucus carota HOM05D005021 ORTHO05D006824 2.4e-133 479.9 528 50.6
Aa31LG9G16120 Aethionema arabicum HOM05D005021 ORTHO05D006824 5.4e-133 478.8 538 48.9
BolC4t22962H Brassica oleracea HOM05D005021 ORTHO05D006824 5.4e-133 478.8 544 49.1
Carub.0004s1679 Capsella rubella HOM05D005021 ORTHO05D006824 5.4e-133 478.8 542 49.4
AL4G31120 Arabidopsis lyrata HOM05D005021 ORTHO05D006824 1.2e-132 477.6 541 48.6
CARHR129260 Cardamine hirsuta HOM05D005021 ORTHO05D006824 1.2e-132 477.6 539 49.4
BcaB02g09480 Brassica carinata HOM05D005021 ORTHO05D006824 2.0e-132 476.9 541 49.4
Lsat_1_v5_gn_2_63641 Lactuca sativa HOM05D005021 ORTHO05D006824 2.0e-132 476.9 528 49.4
Thhalv10016146m.g Eutrema salsugineum HOM05D005021 ORTHO05D006824 1.0e-131 474.6 540 48.1
FAN25G1951 Fragaria x ananassa HOM05D005021 ORTHO05D006824 3.6e-129 466.1 527 49.3
Duzib248G0067 Durio zibethinus HOM05D005021 ORTHO05D006824 4.7e-129 465.7 472 51.9
AUR62041742 Chenopodium quinoa HOM05D005021 ORTHO05D006824 6.1e-129 465.3 533 47.3
Hund09140 Selenicereus undatus HOM05D005021 ORTHO05D006824 1.0e-128 464.5 537 47.5
AUR62037395 Chenopodium quinoa HOM05D005021 ORTHO05D006824 2.0e-127 460.3 530 46.2
unitig_748.g8077 Utricularia gibba HOM05D005021 ORTHO05D006824 2.6e-127 459.9 528 47.7
EL10Ac9g20953 Beta vulgaris HOM05D005021 ORTHO05D006824 2.9e-126 456.4 530 46.0
Ah.01g015830 Amaranthus hybridus HOM05D005021 ORTHO05D006824 2.4e-125 453.4 536 45.1
ATR0752G031 Amborella trichopoda HOM05D005021 ORTHO05D006824 1.3e-123 447.6 532 45.9
AT2G35110 Arabidopsis thaliana HOM05D005021 ORTHO05D006824 3.0e-123 446.4 509 49.5
HPP92_017169 Vanilla planifolia HOM05D005021 ORTHO05D006824 3.9e-123 446.0 529 46.3
Pp3c11_1080 Physcomitrium patens HOM05D005021 ORTHO05D006824 1.1e-120 438.0 535 46.2
Os08g0544500 Oryza sativa ssp. japonica HOM05D005021 ORTHO05D006824 9.8e-119 431.4 537 44.1
SGA_v2.0_scaffold175G39355 Striga asiatica HOM05D005021 ORTHO05D006824 2.2e-118 430.3 531 46.1
SMO367G0195 Selaginella moellendorffii HOM05D005021 ORTHO05D006824 5.4e-117 425.6 530 47.2
Zm00001eb405230 Zea mays HOM05D005021 ORTHO05D006824 1.2e-116 424.5 534 44.6
Pp3c1_6150 Physcomitrium patens HOM05D005021 ORTHO05D006824 1.3e-115 421.0 538 43.7
QL11p016288 Quercus lobata HOM05D005021 ORTHO05D006824 6.2e-113 412.1 438 49.1
Actinidia33677 Actinidia chinensis HOM05D005021 ORTHO05D006824 1.9e-109 400.6 528 44.1
Hma1.2p1_1005F.1_g246940 Hydrangea macrophylla HOM05D005021 ORTHO05D006824 3.5e-100 369.8 362 51.7
RhsimUnG0043400 Rhododendron simsii HOM05D005021 ORTHO05D006824 2.4e-96 357.1 362 49.4
Sc17g0003700 Simmondsia chinensis HOM05D005021 ORTHO05D006824 1.1e-93 348.2 368 47.3
CDE05G3601 Ceratophyllum demersum HOM05D005021 ORTHO05D006824 6.6e-91 339.0 299 55.9
BcaNung06473 Brassica carinata HOM05D005021 ORTHO05D006824 2.5e-69 267.3 432 41.2
Medtr4g081610 Medicago truncatula HOM05D005021 ORTHO05D006824 3.8e-54 216.9 191 55.5
CBR_g30692 Chara braunii HOM05D005021 ORTHO05D006824 6.5e-46 189.5 491 28.1
Medtr4g081600 Medicago truncatula HOM05D005021 ORTHO05D006824 4.2e-45 186.8 322 37.0
Psat0s5010g0080 Pisum sativum HOM05D005021 ORTHO05D006824 3.2e-37 160.6 117 59.8
Sp2g07020 Schrenkiella parvula HOM05D005021 ORTHO05D006824 2.1e-36 157.9 304 36.5
Psat0s2371g0040 Pisum sativum HOM05D000434 ORTHO05D006824 9.8e-26 122.5 90 57.8
GSVIVG01004787001 Vitis vinifera HOM05D000908 ORTHO05D000789 1.3e-17 95.5 84 52.4
Zm00001eb290420 Zea mays HOM05D005021 ORTHO05D006824 1.9e-13 81.6 107 40.2
Oeu048766.1 Olea europaea HOM05D001727 ORTHO05D001758 9.5e-13 79.3 85 49.4
Potri.015G124200 Populus trichocarpa HOM05D005021 ORTHO05D006824 1.5e-10 72.0 136 39.7
Zm00001eb404970 Zea mays HOM05D005021 ORTHO05D006824 1.5e-10 72.0 69 53.6


User provided reference genes

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