Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39891 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.9e-237 826.6 971 100.0
SEGI_13181 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.6e-77 295.4 840 63.6
SEGI_07878 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.9e-55 221.5 850 64.7
SEGI_38663 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 5.8e-48 197.2 894 63.3
SEGI_25326 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 7.6e-48 196.8 839 63.6
SEGI_22325 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 3.9e-44 184.5 861 63.1
SEGI_12792 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 4.3e-43 181.0 507 69.6
SEGI_31982 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.2e-37 162.9 863 60.5
SEGI_16220 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.1e-34 150.2 865 59.5
SEGI_24216 Sequoiadendron giganteum HOM05D051108 ORTHO05D011908 1.8e-28 132.5 157 57.3
SEGI_01075 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.3e-26 126.3 514 64.2
SEGI_33040 Sequoiadendron giganteum HOM05D000004 ORTHO05D011908 1.5e-19 102.8 520 67.5
SEGI_33735 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.2e-16 93.2 511 67.7
SEGI_22688 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 3.8e-15 88.2 70 61.4
SEGI_27931 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 6.5e-15 87.4 523 45.3
SEGI_34046 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 3.9e-12 78.2 85 45.9
SEGI_27814 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 6.7e-12 77.4 395 53.7
SEGI_02883 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.9e-11 75.9 144 48.6
SEGI_17737 Sequoiadendron giganteum HOM05D000071 ORTHO05D014261 1.9e-11 75.9 72 55.6
SEGI_04932 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 9.7e-11 73.6 71 52.1
SEGI_22638 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 2.2e-10 72.4 85 47.1
SalBow5G3751 Salvia bowleyana HOM05D000053 ORTHO05D000448 4.8e-10 71.2 275 46.2
SEGI_00886 Sequoiadendron giganteum HOM05D000071 ORTHO05D014261 6.3e-10 70.9 65 55.4
SEGI_22282 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.2e-10 70.5 53 64.2
SEGI_35972 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 8.2e-10 70.5 64 54.7
SEGI_05400 Sequoiadendron giganteum HOM05D000002 ORTHO05D011908 1.4e-09 69.7 145 41.4
SEGI_21082 Sequoiadendron giganteum HOM05D000071 ORTHO05D012301 1.4e-09 69.7 64 48.4
SEGI_30394 Sequoiadendron giganteum HOM05D000071 ORTHO05D014261 1.4e-09 69.7 68 51.5
Eucgr.F00297 Eucalyptus grandis HOM05D000053 ORTHO05D000035 2.4e-09 68.9 190 58.9
SEGI_26209 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 2.4e-09 68.9 79 43.0
SEGI_36595 Sequoiadendron giganteum HOM05D000071 ORTHO05D014261 2.4e-09 68.9 79 43.0
FAN25G0116 Fragaria x ananassa HOM05D000071 ORTHO05D000029 3.1e-09 68.6 334 39.8
SEGI_22504 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 3.1e-09 68.6 176 31.2
SalBow5G2318 Salvia bowleyana HOM05D000053 ORTHO05D000448 5.3e-09 67.8 319 42.6
SEGI_13231 Sequoiadendron giganteum HOM05D011039 ORTHO05D014261 9.0e-09 67.0 72 48.6
SEGI_13728 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.2e-08 66.6 74 45.9
SEGI_05036 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 1.5e-08 66.2 57 59.6
SEGI_23470 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.5e-08 66.2 64 53.1
MBI17_g34868_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 2.6e-08 65.5 336 41.4
SEGI_41354 Sequoiadendron giganteum HOM05D000071 ORTHO05D014261 2.6e-08 65.5 65 46.2
MELO3C008957.2 Cucumis melo HOM05D000071 ORTHO05D000029 3.4e-08 65.1 76 40.8
Os01g0603800 Oryza sativa ssp. japonica HOM05D000071 ORTHO05D000029 3.4e-08 65.1 75 44.0
GSVIVG01013992001 Vitis vinifera HOM05D000053 ORTHO05D000035 3.4e-08 65.1 217 52.5
SEGI_40972 Sequoiadendron giganteum HOM05D000053 ORTHO05D000029 4.5e-08 64.7 69 46.4
CsaV3_5G005030 Cucumis sativus L. HOM05D000071 ORTHO05D000029 5.9e-08 64.3 92 41.3
FAN10G3344 Fragaria x ananassa HOM05D000053 ORTHO05D000035 5.9e-08 64.3 287 44.9
QL03p070165 Quercus lobata HOM05D000053 ORTHO05D000035 5.9e-08 64.3 176 60.8
RcHm_v2.0_Chr2g0156251 Rosa chinensis HOM05D000053 ORTHO05D000035 5.9e-08 64.3 174 62.1
SEGI_38237 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 5.9e-08 64.3 67 49.3
Gohir.A09G181250 Gossypium hirsutum HOM05D000071 ORTHO05D000029 1.0e-07 63.5 70 42.9
RcHm_v2.0_Chr5g0083531 Rosa chinensis HOM05D000053 ORTHO05D000035 1.3e-07 63.2 169 60.9
Medtr3g031520 Medicago truncatula HOM05D000071 ORTHO05D000029 1.7e-07 62.8 69 44.9
QL03p007768 Quercus lobata HOM05D000053 ORTHO05D000035 1.7e-07 62.8 199 56.3
RcHm_v2.0_Chr5g0083471 Rosa chinensis HOM05D000053 ORTHO05D000035 1.7e-07 62.8 170 61.2
SEGI_09791 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.7e-07 62.8 71 42.3
Dinv02880 Davidia involucrata HOM05D000053 ORTHO05D000448 2.2e-07 62.4 175 62.3
Medtr5g069580 Medicago truncatula HOM05D000071 ORTHO05D000029 2.2e-07 62.4 71 43.7
SEGI_27319 Sequoiadendron giganteum HOM05D000071 ORTHO05D012301 2.2e-07 62.4 64 46.9
SEGI_33106 Sequoiadendron giganteum HOM05D000071 ORTHO05D011908 2.2e-07 62.4 43 69.8
Thecc.03G177400 Theobroma cacao HOM05D000071 ORTHO05D000029 2.2e-07 62.4 76 40.8
TAR626G1636 Trochodendron aralioides HOM05D000053 ORTHO05D000035 2.2e-07 62.4 165 63.6
CSS0025857 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 2.9e-07 62.0 79 40.5
CANSAT11G2318 Cannabis sativa HOM05D000071 ORTHO05D000029 2.9e-07 62.0 71 42.3
CiPaw.05G069000 Carya illinoinensis HOM05D000311 ORTHO05D000183 2.9e-07 62.0 75 45.3
Prupe.2G077400 Prunus persica HOM05D000071 ORTHO05D000029 2.9e-07 62.0 70 41.4
Prupe.2G077700 Prunus persica HOM05D000071 ORTHO05D000029 2.9e-07 62.0 70 41.4
SalBow5G1696 Salvia bowleyana HOM05D000053 ORTHO05D000448 2.9e-07 62.0 171 62.0
SEGI_01234 Sequoiadendron giganteum HOM05D000071 ORTHO05D012301 2.9e-07 62.0 50 56.0
SEGI_16344 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 2.9e-07 62.0 68 44.1
SEGI_32314 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 3.8e-07 61.6 75 41.3
AUR62032302 Chenopodium quinoa HOM05D000053 ORTHO05D000035 5.0e-07 61.2 288 37.2
Gorai.011G155400 Gossypium raimondii HOM05D000053 ORTHO05D000035 5.0e-07 61.2 202 54.0
SEGI_31536 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 5.0e-07 61.2 72 45.8
TAR624G0734 Trochodendron aralioides HOM05D000053 ORTHO05D000035 5.0e-07 61.2 237 48.5
arahy.Tifrunner.gnm1.ann1.52U7PF Arachis hypogaea HOM05D000071 ORTHO05D000029 6.5e-07 60.8 70 42.9
MELO3C002747.2 Cucumis melo HOM05D000071 ORTHO05D000029 6.5e-07 60.8 76 36.8
FAN10G3652 Fragaria x ananassa HOM05D000053 ORTHO05D000035 6.5e-07 60.8 296 43.6
Lj5C642T0 Lonicera japonica HOM05D000053 ORTHO05D000448 8.5e-07 60.5 161 67.1
Medtr1g032480 Medicago truncatula HOM05D000071 ORTHO05D000029 8.5e-07 60.5 70 44.3
QL01p027177 Quercus lobata HOM05D000053 ORTHO05D000035 8.5e-07 60.5 185 57.8
SEGI_09340 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 8.5e-07 60.5 76 39.5
CARHR105520 Cardamine hirsuta HOM05D000053 ORTHO05D000035 1.1e-06 60.1 85 35.3
Cfa016308 Carpinus fangiana HOM05D000071 ORTHO05D000029 1.1e-06 60.1 78 37.2
Gohir.D10G139800 Gossypium hirsutum HOM05D000053 ORTHO05D000448 1.1e-06 60.1 172 59.9
HanXRQChr08g0215281 Helianthus annuus HOM05D000071 ORTHO05D000029 1.1e-06 60.1 72 38.9
Peaxi162Scf00132g00239 Petunia axillaris HOM05D000071 ORTHO05D000029 1.1e-06 60.1 280 45.0
Phvul.004G100200 Phaseolus vulgaris HOM05D000071 ORTHO05D000029 1.1e-06 60.1 68 44.1
QL03p070578 Quercus lobata HOM05D000053 ORTHO05D000035 1.1e-06 60.1 72 41.7
SEGI_32674 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.1e-06 60.1 67 43.3
AUR62025942 Chenopodium quinoa HOM05D000053 ORTHO05D000035 1.4e-06 59.7 241 48.5
QL02p099694 Quercus lobata HOM05D000053 ORTHO05D000035 1.4e-06 59.7 193 56.5
Rhsim03G0181300 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.4e-06 59.7 75 40.0
SEGI_06646 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.4e-06 59.7 71 39.4
SEGI_12701 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.4e-06 59.7 107 27.1
SEGI_13270 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 1.4e-06 59.7 68 42.6
TPR.G14786 Trifolium pratense HOM05D000071 ORTHO05D000029 1.4e-06 59.7 72 43.1
TAR624G1295 Trochodendron aralioides HOM05D000053 ORTHO05D000035 1.4e-06 59.7 173 61.8
Rhsim03G0181200 Rhododendron simsii HOM05D000683 ORTHO05D000507 1.9e-06 59.3 75 40.0
RcHm_v2.0_Chr3g0494931 Rosa chinensis HOM05D000053 ORTHO05D000035 1.9e-06 59.3 163 66.3
RcHm_v2.0_Chr5g0083611 Rosa chinensis HOM05D000053 ORTHO05D000035 1.9e-06 59.3 164 60.4
SalBow7G0457 Salvia bowleyana HOM05D000071 ORTHO05D000029 1.9e-06 59.3 70 38.6
SEGI_34755 Sequoiadendron giganteum HOM05D000053 ORTHO05D012301 1.9e-06 59.3 66 47.0
THA.LOC104818688 Tarenaya hassleriana HOM05D000053 ORTHO05D000035 1.9e-06 59.3 187 57.8
Manes.12G001300 Manihot esculenta HOM05D000071 ORTHO05D000029 2.5e-06 58.9 82 40.2
QL03p054392 Quercus lobata HOM05D000053 ORTHO05D000035 2.5e-06 58.9 203 55.2
RcHm_v2.0_Chr5g0083401 Rosa chinensis HOM05D000053 ORTHO05D000035 2.5e-06 58.9 169 60.4
Sed0016075 Sechium edule HOM05D000071 ORTHO05D000029 2.5e-06 58.9 72 37.5
SEGI_14633 Sequoiadendron giganteum HOM05D000071 ORTHO05D014261 2.5e-06 58.9 52 57.7
SEGI_18664 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 2.5e-06 58.9 170 63.5
SEGI_33377 Sequoiadendron giganteum HOM05D000071 ORTHO05D012301 2.5e-06 58.9 72 43.1
ATR0918G001 Amborella trichopoda HOM05D016351 ORTHO05D012563 3.2e-06 58.5 72 40.3
CSS0039606 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 3.2e-06 58.5 88 31.8
Cpa.g.sc120.25 Carica papaya HOM05D000053 ORTHO05D000448 3.2e-06 58.5 150 65.3
Gohir.D02G021001 Gossypium hirsutum HOM05D000053 ORTHO05D000448 3.2e-06 58.5 216 49.5
Peaxi162Scf01132g00111 Petunia axillaris HOM05D000053 ORTHO05D000448 3.2e-06 58.5 167 62.3
CSS0041175 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 4.2e-06 58.2 88 33.0
DCAR_031011 Daucus carota HOM05D000071 ORTHO05D000029 4.2e-06 58.2 75 37.3
Dinv35215 Davidia involucrata HOM05D000071 ORTHO05D000029 4.2e-06 58.2 276 44.9
Eucgr.F00286 Eucalyptus grandis HOM05D000053 ORTHO05D000035 4.2e-06 58.2 187 59.9
Eucgr.G00897 Eucalyptus grandis HOM05D000071 ORTHO05D000029 4.2e-06 58.2 78 39.7
Lsat_1_v5_gn_3_27400 Lactuca sativa HOM05D000094 ORTHO05D000455 4.2e-06 58.2 242 47.1
MD01G1212300 Malus domestica HOM05D000071 ORTHO05D000029 4.2e-06 58.2 74 35.1
Medtr7g009580 Medicago truncatula HOM05D000053 ORTHO05D000035 4.2e-06 58.2 318 41.2
vmacro06675 Vaccinium macrocarpon HOM05D000071 ORTHO05D000029 4.2e-06 58.2 72 40.3
ATR0925G003 Amborella trichopoda HOM05D000071 ORTHO05D012563 5.5e-06 57.8 72 40.3
arahy.Tifrunner.gnm1.ann1.9F13RK Arachis hypogaea HOM05D000071 ORTHO05D000029 5.5e-06 57.8 71 42.3
CSS0025670 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 5.5e-06 57.8 74 39.2
AUR62011497 Chenopodium quinoa HOM05D000311 ORTHO05D000183 5.5e-06 57.8 70 47.1
Ca_10691_v3 Cicer arietinum L. HOM05D000071 ORTHO05D000029 5.5e-06 57.8 72 40.3
COL.COLO4_17410 Corchorus olitorius HOM05D000053 ORTHO05D000035 5.5e-06 57.8 217 53.0
DCAR_031009 Daucus carota HOM05D000071 ORTHO05D000029 5.5e-06 57.8 67 40.3
Gohir.A10G127048 Gossypium hirsutum HOM05D000053 ORTHO05D000035 5.5e-06 57.8 209 51.2
Hma1.2p1_0479F.1_g161460 Hydrangea macrophylla HOM05D000053 ORTHO05D000448 5.5e-06 57.8 143 69.9
Medtr1g101250 Medicago truncatula HOM05D000071 ORTHO05D000029 5.5e-06 57.8 90 36.7
Phvul.004G103300 Phaseolus vulgaris HOM05D000071 ORTHO05D000029 5.5e-06 57.8 71 36.6
QL09p011863 Quercus lobata HOM05D000071 ORTHO05D000029 5.5e-06 57.8 71 40.8
QL09p011872 Quercus lobata HOM05D000071 ORTHO05D000029 5.5e-06 57.8 71 40.8
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 5.5e-06 57.8 70 40.0
SEGI_20659 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 5.5e-06 57.8 68 47.1
SEGI_34273 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 5.5e-06 57.8 72 43.1
TAR622G1251 Trochodendron aralioides HOM05D000053 ORTHO05D000035 5.5e-06 57.8 139 71.2
CSS0033546 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 7.2e-06 57.4 84 33.3
Ciclev10015631m.g Citrus clementina HOM05D000053 ORTHO05D000035 7.2e-06 57.4 175 59.4
FvH4_6g28530 Fragaria vesca HOM05D000071 ORTHO05D000029 7.2e-06 57.4 74 37.8
FAN14G0510 Fragaria x ananassa HOM05D000071 ORTHO05D000029 7.2e-06 57.4 74 37.8
PGR102G2300 Punica granatum HOM05D000071 ORTHO05D000029 7.2e-06 57.4 86 38.4
SEGI_10182 Sequoiadendron giganteum HOM05D000071 ORTHO05D012301 7.2e-06 57.4 64 45.3
SEGI_21198 Sequoiadendron giganteum HOM05D000071 ORTHO05D012301 7.2e-06 57.4 64 45.3
SEGI_23516 Sequoiadendron giganteum HOM05D010421 ORTHO05D000029 7.2e-06 57.4 168 60.7
TPR.G10147 Trifolium pratense HOM05D000071 ORTHO05D000029 7.2e-06 57.4 70 42.9
Duzib268G0028 Durio zibethinus HOM05D000053 ORTHO05D000035 9.4e-06 57.0 173 62.4
FAN08G3589 Fragaria x ananassa HOM05D000071 ORTHO05D000029 9.4e-06 57.0 78 37.2
Lalb_Chr10g0091571 Lupinus albus HOM05D000071 ORTHO05D000029 9.4e-06 57.0 68 39.7
Sed0022300 Sechium edule HOM05D000071 ORTHO05D000029 9.4e-06 57.0 74 36.5
SEGI_35215 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 9.4e-06 57.0 74 43.2
TAR626G1657 Trochodendron aralioides HOM05D000311 ORTHO05D000183 9.4e-06 57.0 76 40.8
GSVIVG01029712001 Vitis vinifera HOM05D000053 ORTHO05D000035 9.4e-06 57.0 194 55.7
Zm00001eb121910 Zea mays HOM05D000071 ORTHO05D000029 9.4e-06 57.0 78 37.2


User provided reference genes

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