Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 6.0e-225 783.9 400 100.0
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 4.9e-110 402.1 357 60.5
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 6.0e-108 395.2 326 64.1
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 6.0e-108 395.2 393 57.0
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 6.0e-108 395.2 319 64.6
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 7.8e-108 394.8 387 56.6
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 1.0e-107 394.4 333 64.0
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 1.7e-107 393.7 322 64.3
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 2.3e-107 393.3 312 65.4
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 3.0e-107 392.9 320 65.0
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 3.9e-107 392.5 321 64.2
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 5.1e-107 392.1 402 55.5
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 1.1e-106 391.0 318 63.5
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 1.1e-106 391.0 318 63.5
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 1.1e-106 391.0 320 63.4
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 1.5e-106 390.6 328 64.0
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 1.9e-106 390.2 319 63.6
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 2.5e-106 389.8 324 64.2
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 5.6e-106 388.7 319 63.6
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 7.3e-106 388.3 374 58.3
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 2.8e-105 386.3 305 65.9
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 4.7e-105 385.6 335 60.3
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 6.2e-105 385.2 316 64.6
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 8.1e-105 384.8 317 64.7
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 1.4e-104 384.0 318 64.2
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 1.4e-104 384.0 313 65.2
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 2.3e-104 383.3 326 61.3
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 2.3e-104 383.3 407 53.1
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 5.2e-104 382.1 306 65.4
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 6.8e-104 381.7 394 56.6
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 8.9e-104 381.3 326 60.7
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 1.5e-103 380.6 326 60.1
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 2.0e-103 380.2 386 54.7
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 2.0e-103 380.2 319 61.4
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 2.0e-103 380.2 319 61.4
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 2.6e-103 379.8 315 63.5
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 3.4e-103 379.4 326 60.1
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 3.4e-103 379.4 319 61.8
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 4.4e-103 379.0 331 60.4
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 4.4e-103 379.0 401 53.4
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 5.8e-103 378.6 319 61.1
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 5.8e-103 378.6 319 61.1
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 5.8e-103 378.6 319 62.1
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 5.8e-103 378.6 324 62.0
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 7.6e-103 378.3 327 60.9
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 7.6e-103 378.3 331 62.2
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 7.6e-103 378.3 315 62.5
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 7.6e-103 378.3 345 59.7
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 9.9e-103 377.9 319 61.1
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 9.9e-103 377.9 330 61.5
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 9.9e-103 377.9 330 61.5
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 9.9e-103 377.9 315 63.5
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 1.3e-102 377.5 320 61.9
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.3e-102 377.5 330 61.5
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 1.7e-102 377.1 326 61.7
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 2.2e-102 376.7 335 60.9
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 2.2e-102 376.7 321 63.6
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 2.2e-102 376.7 310 63.5
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 3.7e-102 375.9 397 52.6
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 3.7e-102 375.9 331 61.9
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 1.1e-101 374.4 383 54.8
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 1.1e-101 374.4 321 63.2
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 1.4e-101 374.0 379 55.7
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 1.9e-101 373.6 355 58.0
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 2.4e-101 373.2 326 59.2
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 4.1e-101 372.5 364 55.8
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 5.4e-101 372.1 378 53.7
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 9.2e-101 371.3 335 59.1
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 9.2e-101 371.3 320 62.2
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 1.6e-100 370.5 303 63.4
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 4.6e-100 369.0 305 64.6
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 6.0e-100 368.6 332 58.7
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 3.0e-99 366.3 321 60.4
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 3.9e-99 365.9 330 59.1
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 8.6e-99 364.8 337 57.9
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 1.9e-98 363.6 310 61.6
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 2.5e-98 363.2 321 61.7
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 3.3e-98 362.8 312 61.5
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 7.3e-98 361.7 354 57.3
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 7.3e-98 361.7 326 59.5
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 2.1e-97 360.1 298 64.8
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 8.1e-97 358.2 310 61.0
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 1.5e-95 354.0 325 58.8
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 2.6e-95 353.2 295 62.7
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 1.1e-93 347.8 372 53.8
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 1.4e-93 347.4 364 53.8
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 7.8e-92 341.7 328 58.5
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.3e-91 340.9 315 59.0
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 1.3e-91 340.9 307 60.3
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 1.5e-90 337.4 396 51.0
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 3.3e-90 336.3 336 53.0
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 4.8e-89 332.4 431 47.1
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 4.2e-85 319.3 306 56.5
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 7.1e-85 318.5 354 51.1
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 7.1e-85 318.5 314 54.5
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 1.7e-83 313.9 332 50.3
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 2.3e-83 313.5 249 65.1
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 8.7e-83 311.6 318 54.1
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 3.3e-74 283.1 239 62.3
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 1.1e-69 268.1 236 58.9
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 2.4e-64 250.4 196 67.3
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 8.7e-59 231.9 276 49.3
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 1.0e-54 218.4 223 54.3
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 1.0e-51 208.4 280 48.6
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 3.9e-51 206.5 246 50.4
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 5.7e-50 202.6 282 46.5
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 1.4e-43 181.4 161 60.9
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 6.7e-43 179.1 148 60.8
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 8.2e-41 172.2 258 41.5
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 3.3e-34 150.2 142 58.5
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 1.8e-32 144.4 239 36.4
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 1.6e-31 141.4 157 52.9
Migut.D00733 Erythranthe guttata HOM05D006407 ORTHO05D008079 9.4e-29 132.1 110 61.8
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 1.0e-27 128.6 137 53.3
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 9.5e-21 105.5 177 39.0
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 1.5e-13 81.6 287 26.8
CDE02G0544 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 1.9e-13 81.3 82 50.0
Cre09.g393800 Chlamydomonas reinhardtii HOM05D006407 ORTHO05D008079 4.3e-13 80.1 211 31.8
arahy.Tifrunner.gnm1.ann1.91BFZF Arachis hypogaea HOM05D006407 ORTHO05D008079 5.7e-10 69.7 72 47.2
Oeu032606.1 Olea europaea HOM05D006407 ORTHO05D008079 7.0e-08 62.8 48 64.6
arahy.Tifrunner.gnm1.ann1.6HQ4SR Arachis hypogaea HOM05D006407 ORTHO05D008079 5.0e-06 56.6 66 42.4


User provided reference genes

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