Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39810 Sequoiadendron giganteum HOM05D007682 ORTHO05D009690 1.3e-24 117.5 211 100.0
Oeu010924.1 Olea europaea HOM05D007682 ORTHO05D009690 3.8e-21 105.9 60 88.3
Solyc01g099930.3 Solanum lycopersicum HOM05D007682 ORTHO05D009690 1.5e-20 104.0 60 86.7
CSS0049840 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 1.9e-20 103.6 59 88.1
AUR62000737 Chenopodium quinoa HOM05D007682 ORTHO05D009690 3.2e-20 102.8 59 88.1
Nn4g25761 Nelumbo nucifera HOM05D007682 ORTHO05D009690 3.2e-20 102.8 59 86.4
SGA_v2.0_scaffold81G26104 Striga asiatica HOM05D007682 ORTHO05D009690 3.2e-20 102.8 60 85.0
CAN.G1273.42 Capsicum annuum HOM05D007682 ORTHO05D009690 5.5e-20 102.1 60 85.0
Nitab4.5_0003113g0070 Nicotiana tabacum HOM05D007682 ORTHO05D009690 5.5e-20 102.1 60 85.0
PSO407G0292 Papaver somniferum HOM05D007682 ORTHO05D009690 5.5e-20 102.1 59 86.4
Peaxi162Scf00037g01515 Petunia axillaris HOM05D007682 ORTHO05D009690 7.2e-20 101.7 60 85.0
SMO367G0406 Selaginella moellendorffii HOM05D007682 ORTHO05D009690 7.2e-20 101.7 60 85.0
Migut.N02098 Erythranthe guttata HOM05D007682 ORTHO05D009690 1.2e-19 100.9 60 83.3
PSO170G1207 Papaver somniferum HOM05D007682 ORTHO05D009690 1.2e-19 100.9 59 84.7
AUR62005227 Chenopodium quinoa HOM05D007682 ORTHO05D009690 1.6e-19 100.5 59 84.7
ECA236G4368 Erigeron canadensis HOM05D000036 ORTHO05D000441 1.6e-19 100.5 59 84.7
MSTRG.27972 Avicennia marina HOM05D007682 ORTHO05D009690 2.1e-19 100.1 60 81.7
HanXRQChr11g0340111 Helianthus annuus HOM05D007682 ORTHO05D009690 3.6e-19 99.4 59 83.1
Lsat_1_v5_gn_7_72960 Lactuca sativa HOM05D007682 ORTHO05D009690 4.7e-19 99.0 59 83.1
TAR633G0769 Trochodendron aralioides HOM05D007682 ORTHO05D009690 6.1e-19 98.6 59 83.1
Actinidia21502 Actinidia chinensis HOM05D007682 ORTHO05D009690 8.0e-19 98.2 60 81.7
PGR031G1366 Punica granatum HOM05D007682 ORTHO05D009690 8.0e-19 98.2 59 81.4
Sc16g0008750 Simmondsia chinensis HOM05D000036 ORTHO05D001038 8.0e-19 98.2 59 86.4
Hma1.2p1_0472F.1_g159680 Hydrangea macrophylla HOM05D007682 ORTHO05D009690 1.0e-18 97.8 59 81.4
Cc02_g34370 Coffea canephora HOM05D007682 ORTHO05D009690 1.4e-18 97.4 60 80.0
DCAR_022138 Daucus carota HOM05D007682 ORTHO05D009690 1.4e-18 97.4 59 79.7
MD10G1017700 Malus domestica HOM05D007682 ORTHO05D009690 1.4e-18 97.4 59 83.1
CDE05G1347 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 1.8e-18 97.1 58 81.0
CDE11G0615 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 1.8e-18 97.1 58 81.0
Dinv30837 Davidia involucrata HOM05D007682 ORTHO05D009690 1.8e-18 97.1 59 83.1
Glyma.19G231600 Glycine max HOM05D007682 ORTHO05D009690 1.8e-18 97.1 59 81.4
THA.LOC104818730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 1.8e-18 97.1 59 79.7
Prupe.8G021600 Prunus persica HOM05D007682 ORTHO05D009690 2.3e-18 96.7 59 81.4
THA.LOC104821730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 2.3e-18 96.7 59 79.7
Gohir.D08G224900 Gossypium hirsutum HOM05D007682 ORTHO05D009690 3.0e-18 96.3 60 78.3
Os12g0516700 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 4.0e-18 95.9 59 78.0
Os12g0554000 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 4.0e-18 95.9 59 78.0
Gorai.004G238900 Gossypium raimondii HOM05D007682 ORTHO05D009690 5.2e-18 95.5 60 78.3
Manes.08G115600 Manihot esculenta HOM05D007682 ORTHO05D009690 5.2e-18 95.5 59 81.4
Haze_04118 Corylus avellana HOM05D007682 ORTHO05D009690 6.7e-18 95.1 59 79.7
Glyma.03G234200 Glycine max HOM05D007682 ORTHO05D009690 6.7e-18 95.1 59 79.7
Phvul.006G088300 Phaseolus vulgaris HOM05D007682 ORTHO05D009690 6.7e-18 95.1 59 79.7
Potri.005G023000 Populus trichocarpa HOM05D007682 ORTHO05D009690 1.1e-17 94.4 59 81.4
Sp2g20980 Schrenkiella parvula HOM05D007682 ORTHO05D009690 1.1e-17 94.4 59 78.0
HPP92_010663 Vanilla planifolia HOM05D007682 ORTHO05D009690 1.1e-17 94.4 62 80.6
Gohir.A08G208100 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.5e-17 94.0 59 78.0
RcHm_v2.0_Chr6g0276771 Rosa chinensis HOM05D007682 ORTHO05D009690 1.5e-17 94.0 59 78.0
arahy.Tifrunner.gnm1.ann1.P6132C Arachis hypogaea HOM05D007682 ORTHO05D009690 2.0e-17 93.6 59 78.0
arahy.Tifrunner.gnm1.ann1.S47DRU Arachis hypogaea HOM05D007682 ORTHO05D009690 2.0e-17 93.6 59 78.0
A06p37270 Brassica napus HOM05D007682 ORTHO05D009690 2.0e-17 93.6 59 76.3
C07p41180 Brassica napus HOM05D007682 ORTHO05D009690 2.0e-17 93.6 59 76.3
BolC7t44646H Brassica oleracea HOM05D007682 ORTHO05D009690 2.0e-17 93.6 59 76.3
BraA06t26650Z Brassica rapa HOM05D007682 ORTHO05D009690 2.0e-17 93.6 59 76.3
CARHR186340 Cardamine hirsuta HOM05D007682 ORTHO05D009690 2.0e-17 93.6 59 78.0
Eucgr.H03256 Eucalyptus grandis HOM05D007682 ORTHO05D009690 2.0e-17 93.6 59 76.3
QL03p019528 Quercus lobata HOM05D007682 ORTHO05D009690 2.0e-17 93.6 58 77.6
Aa31LG11G9610 Aethionema arabicum HOM05D007682 ORTHO05D009690 2.6e-17 93.2 59 76.3
BcaNung04745 Brassica carinata HOM05D007682 ORTHO05D009690 2.6e-17 93.2 59 76.3
Gorai.007G301900 Gossypium raimondii HOM05D007682 ORTHO05D009690 2.6e-17 93.2 59 78.0
Thecc.05G315600 Theobroma cacao HOM05D007682 ORTHO05D009690 2.6e-17 93.2 59 78.0
TPR.G1619 Trifolium pratense HOM05D007682 ORTHO05D009690 3.3e-17 92.8 60 76.7
Duzib177G0692 Durio zibethinus HOM05D007682 ORTHO05D009690 4.4e-17 92.4 59 78.0
FAN20G0672 Fragaria x ananassa HOM05D007682 ORTHO05D009690 4.4e-17 92.4 59 76.3
FAN24G1339 Fragaria x ananassa HOM05D007682 ORTHO05D009690 4.4e-17 92.4 59 76.3
Medtr7g112600 Medicago truncatula HOM05D007682 ORTHO05D009690 4.4e-17 92.4 59 78.0
Psat3g011680 Pisum sativum HOM05D007682 ORTHO05D009690 4.4e-17 92.4 59 78.0
Zm00001eb410110 Zea mays HOM05D007682 ORTHO05D009690 4.4e-17 92.4 61 77.0
Atru.chr2.100 Acer truncatum HOM05D007682 ORTHO05D009690 5.7e-17 92.0 59 78.0
AT5G27860 Arabidopsis thaliana HOM05D007682 ORTHO05D009690 5.7e-17 92.0 59 76.3
CiPaw.08G159600 Carya illinoinensis HOM05D007682 ORTHO05D009690 5.7e-17 92.0 59 76.3
Gohir.D11G279700 Gossypium hirsutum HOM05D007682 ORTHO05D009690 7.5e-17 91.7 59 76.3
TWI56G1223 Tripterygium wilfordii HOM05D007682 ORTHO05D009690 7.5e-17 91.7 59 76.3
GSVIVG01031165001 Vitis vinifera HOM05D000036 ORTHO05D000441 7.5e-17 91.7 59 78.0
Gohir.A11G269500 Gossypium hirsutum HOM05D007682 ORTHO05D009690 9.7e-17 91.3 59 76.3
Lalb_Chr15g0077471 Lupinus albus HOM05D007682 ORTHO05D009690 9.7e-17 91.3 58 77.6
Sabra05G0029000 Salix brachista HOM05D007682 ORTHO05D009690 9.7e-17 91.3 59 79.7
CsaV3_1G038640 Cucumis sativus L. HOM05D007682 ORTHO05D009690 1.7e-16 90.5 60 73.3
Cfa006654 Carpinus fangiana HOM05D007682 ORTHO05D009690 2.2e-16 90.1 59 76.3
MBI19_g44105_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 2.2e-16 90.1 54 83.3
FAN15G0817 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.1e-15 87.8 59 72.9
Hund07111 Selenicereus undatus HOM05D007682 ORTHO05D009690 1.8e-15 87.0 78 64.1
Nitab4.5_0003497g0050 Nicotiana tabacum HOM05D007682 ORTHO05D009690 2.4e-15 86.7 52 82.7
Sed0011876 Sechium edule HOM05D007682 ORTHO05D009690 2.4e-15 86.7 59 71.2
Ah.06g189950 Amaranthus hybridus HOM05D007682 ORTHO05D009690 5.3e-15 85.5 51 84.3
ATR0693G225 Amborella trichopoda HOM05D007682 ORTHO05D009690 7.0e-15 85.1 52 80.8
CSS0031357 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 1.2e-14 84.3 59 72.9
EL10Ac4g09894 Beta vulgaris HOM05D007682 ORTHO05D009690 1.6e-14 84.0 51 82.4
AL6G39080 Arabidopsis lyrata HOM05D007682 ORTHO05D009690 2.0e-14 83.6 59 71.2
Lj1g0016295 Lotus japonicus HOM05D007682 ORTHO05D009690 7.7e-14 81.6 64 68.8
unitig_699.g19250 Utricularia gibba HOM05D007682 ORTHO05D009690 1.3e-13 80.9 50 78.0
HPP92_010684 Vanilla planifolia HOM05D007682 ORTHO05D009690 2.9e-13 79.7 61 70.5
MBI19_g47767_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 3.2e-12 76.3 54 75.9
DCAR_022140 Daucus carota HOM05D007682 ORTHO05D009690 1.6e-11 73.9 52 69.2


User provided reference genes

Program Settings