Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39771 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 3.0e-254 881.3 444 100.0
SEGI_13590 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.8e-221 770.8 410 96.1
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 2.6e-27 127.5 134 52.2
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 2.4e-25 120.9 107 53.3
Sc13g0001470 Simmondsia chinensis HOM05D005255 ORTHO05D006276 4.6e-24 116.7 89 60.7
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 3.9e-23 113.6 87 58.6
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 8.6e-23 112.5 168 39.3
TAR623G1440 Trochodendron aralioides HOM05D005255 ORTHO05D006276 8.6e-23 112.5 168 39.3
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 1.1e-22 112.1 143 42.7
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 1.1e-22 112.1 170 38.8
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 1.5e-22 111.7 84 59.5
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 1.5e-22 111.7 87 57.5
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 1.9e-22 111.3 77 64.9
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 1.9e-22 111.3 89 56.2
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 1.9e-22 111.3 181 37.6
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 4.3e-22 110.2 83 57.8
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 4.3e-22 110.2 96 53.1
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 5.6e-22 109.8 174 33.9
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 7.3e-22 109.4 121 47.9
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 7.3e-22 109.4 109 48.6
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 9.5e-22 109.0 80 57.5
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 9.5e-22 109.0 77 59.7
TAR628G1157 Trochodendron aralioides HOM05D005255 ORTHO05D006276 9.5e-22 109.0 99 50.5
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 1.2e-21 108.6 86 57.0
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 1.2e-21 108.6 86 57.0
PGSC0003DMG400012726 Solanum tuberosum HOM05D005255 ORTHO05D006276 1.2e-21 108.6 77 59.7
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 1.6e-21 108.2 87 55.2
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 1.6e-21 108.2 73 60.3
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 2.1e-21 107.8 123 46.3
Ca_30365_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 2.1e-21 107.8 102 49.0
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 2.1e-21 107.8 80 57.5
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 2.8e-21 107.5 184 37.0
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 2.8e-21 107.5 80 56.2
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 2.8e-21 107.5 121 47.1
HPP92_003249 Vanilla planifolia HOM05D005255 ORTHO05D006276 3.6e-21 107.1 72 62.5
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 4.7e-21 106.7 77 58.4
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 6.2e-21 106.3 154 39.0
MSTRG.6397 Avicennia marina HOM05D005255 ORTHO05D006276 6.2e-21 106.3 142 42.3
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 6.2e-21 106.3 106 44.3
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 6.2e-21 106.3 74 58.1
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 6.2e-21 106.3 106 49.1
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 8.0e-21 105.9 129 45.7
CsaV3_4G021950 Cucumis sativus L. HOM05D005255 ORTHO05D006276 8.0e-21 105.9 106 44.3
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 8.0e-21 105.9 87 56.3
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 8.0e-21 105.9 73 56.2
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 1.0e-20 105.5 107 45.8
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 1.0e-20 105.5 102 50.0
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 1.4e-20 105.1 117 43.6
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 1.4e-20 105.1 137 37.2
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 1.4e-20 105.1 81 58.0
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 2.3e-20 104.4 108 45.4
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 2.3e-20 104.4 104 51.0
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 2.3e-20 104.4 76 56.6
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 2.3e-20 104.4 89 50.6
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 2.3e-20 104.4 92 53.3
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 3.1e-20 104.0 115 44.3
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 4.0e-20 103.6 71 59.2
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 5.2e-20 103.2 81 55.6
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 5.2e-20 103.2 98 50.0
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 6.8e-20 102.8 287 28.9
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 6.8e-20 102.8 85 52.9
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 6.8e-20 102.8 134 41.0
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 8.9e-20 102.4 81 54.3
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 8.9e-20 102.4 115 41.7
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 8.9e-20 102.4 68 58.8
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 1.2e-19 102.1 94 48.9
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 1.2e-19 102.1 150 39.3
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 1.5e-19 101.7 105 49.5
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 1.5e-19 101.7 152 39.5
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 1.5e-19 101.7 128 39.8
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 1.5e-19 101.7 92 50.0
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 2.0e-19 101.3 82 52.4
RcHm_v2.0_Chr3g0484111 Rosa chinensis HOM05D005255 ORTHO05D006276 2.6e-19 100.9 70 61.4
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 3.4e-19 100.5 164 36.6
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 4.4e-19 100.1 70 60.0
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 4.4e-19 100.1 110 46.4
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 7.5e-19 99.4 81 58.0
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 7.5e-19 99.4 106 44.3
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 9.8e-19 99.0 90 50.0
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 9.8e-19 99.0 124 39.5
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 9.8e-19 99.0 93 46.2
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 9.8e-19 99.0 93 46.2
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 9.8e-19 99.0 106 44.3
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 1.7e-18 98.2 88 47.7
Pp3c8_2040 Physcomitrium patens HOM05D005255 ORTHO05D006276 2.2e-18 97.8 147 41.5
Cpa.g.sc120.15 Carica papaya HOM05D005255 ORTHO05D006276 2.9e-18 97.4 158 38.6
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 2.9e-18 97.4 93 49.5
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 3.7e-18 97.1 81 53.1
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 4.9e-18 96.7 117 43.6
FvH4_6g24820 Fragaria vesca HOM05D005255 ORTHO05D006276 6.4e-18 96.3 70 57.1
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 8.3e-18 95.9 81 56.8
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 1.1e-17 95.5 104 47.1
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 1.1e-17 95.5 109 41.3
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 1.4e-17 95.1 111 41.4
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 1.9e-17 94.7 220 30.5
FAN14G1086 Fragaria x ananassa HOM05D005255 ORTHO05D006276 1.9e-17 94.7 70 55.7
Pp3c4_1630 Physcomitrium patens HOM05D005255 ORTHO05D006276 7.0e-17 92.8 96 49.0
Pp3c4_1631 Physcomitrium patens HOM05D005255 ORTHO05D006276 7.0e-17 92.8 96 49.0
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 1.2e-16 92.0 220 30.0
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 1.6e-16 91.7 80 48.8
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 2.0e-16 91.3 119 38.7
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 2.7e-16 90.9 112 41.1
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 4.6e-16 90.1 119 37.8
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 6.0e-16 89.7 98 43.9
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 7.8e-16 89.4 112 40.2
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 1.7e-15 88.2 221 30.3
Nitab4.5_0000826g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 6.2e-13 79.7 53 62.3
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 1.8e-12 78.2 67 52.2
Ca_13718_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 1.5e-06 58.5 57 47.4
RcHm_v2.0_Chr1g0374991 Rosa chinensis HOM05D005255 ORTHO05D006276 5.6e-06 56.6 30 73.3
unitig_8.g3496 Utricularia gibba HOM05D005255 ORTHO05D006276 5.6e-06 56.6 44 52.3


User provided reference genes

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