Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 1.5e-76 289.3 134 100.0
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 9.5e-26 120.6 78 67.9
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 2.8e-25 119.0 72 69.4
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 6.2e-25 117.9 77 64.9
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 6.2e-25 117.9 72 66.7
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 6.2e-25 117.9 72 66.7
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 1.4e-24 116.7 75 64.0
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 1.4e-24 116.7 78 60.3
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 1.8e-24 116.3 70 70.0
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 6.8e-24 114.4 75 65.3
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 6.8e-24 114.4 70 67.1
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 1.2e-23 113.6 75 65.3
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 1.5e-23 113.2 75 61.3
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.5e-23 113.2 66 71.2
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 2.0e-23 112.8 74 63.5
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 2.0e-23 112.8 78 57.7
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 2.0e-23 112.8 68 66.2
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 2.0e-23 112.8 70 67.1
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 2.6e-23 112.5 75 61.3
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 3.4e-23 112.1 75 62.7
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 4.4e-23 111.7 66 68.2
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 5.8e-23 111.3 75 61.3
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 7.5e-23 110.9 70 65.7
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 9.8e-23 110.5 75 60.0
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 9.8e-23 110.5 70 67.1
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 1.3e-22 110.2 79 59.5
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 1.3e-22 110.2 79 63.3
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 1.7e-22 109.8 66 68.2
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 2.2e-22 109.4 66 69.7
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 2.2e-22 109.4 67 68.7
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 4.9e-22 108.2 77 61.0
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 6.4e-22 107.8 72 61.1
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 6.4e-22 107.8 66 68.2
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 6.4e-22 107.8 64 71.9
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 6.4e-22 107.8 64 71.9
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 6.4e-22 107.8 66 63.6
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 6.4e-22 107.8 66 63.6
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 1.1e-21 107.1 75 60.0
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 1.4e-21 106.7 75 61.3
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 1.4e-21 106.7 77 63.6
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 1.4e-21 106.7 68 60.3
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 1.4e-21 106.7 68 66.2
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 1.4e-21 106.7 66 66.7
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 1.9e-21 106.3 70 64.3
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 1.9e-21 106.3 66 66.7
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 1.9e-21 106.3 70 64.3
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 2.4e-21 105.9 70 64.3
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.4e-21 105.9 70 65.7
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 2.4e-21 105.9 70 64.3
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 3.2e-21 105.5 67 65.7
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 4.1e-21 105.1 66 60.6
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 4.1e-21 105.1 76 59.2
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 4.1e-21 105.1 70 64.3
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 4.1e-21 105.1 74 63.5
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 4.1e-21 105.1 75 58.7
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 5.4e-21 104.8 72 58.3
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 5.4e-21 104.8 74 63.5
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 7.1e-21 104.4 66 65.2
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 7.1e-21 104.4 70 62.9
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 9.2e-21 104.0 70 64.3
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 9.2e-21 104.0 66 63.6
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 9.2e-21 104.0 75 56.0
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 9.2e-21 104.0 67 67.2
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 1.2e-20 103.6 77 59.7
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 1.2e-20 103.6 77 57.1
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 1.2e-20 103.6 77 57.1
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 1.6e-20 103.2 67 65.7
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 1.6e-20 103.2 78 56.4
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 2.1e-20 102.8 74 58.1
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 2.1e-20 102.8 78 56.4
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 2.1e-20 102.8 66 63.6
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 2.7e-20 102.4 74 63.5
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 3.5e-20 102.1 66 62.1
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 3.5e-20 102.1 66 69.7
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 6.0e-20 101.3 66 65.2
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 6.0e-20 101.3 66 63.6
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 6.0e-20 101.3 78 56.4
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 6.0e-20 101.3 72 59.7
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 1.0e-19 100.5 74 62.2
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 1.3e-19 100.1 66 63.6
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 1.7e-19 99.8 66 60.6
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 1.7e-19 99.8 66 60.6
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 1.7e-19 99.8 66 60.6
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 1.7e-19 99.8 66 60.6
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.7e-19 99.8 78 55.1
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 1.7e-19 99.8 66 65.2
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 3.0e-19 99.0 78 53.8
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 3.9e-19 98.6 66 63.6
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 3.9e-19 98.6 66 68.2
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 5.1e-19 98.2 66 65.2
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 5.1e-19 98.2 91 52.7
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 8.6e-19 97.4 67 64.2
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 1.1e-18 97.1 67 62.7
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 5.6e-18 94.7 78 52.6
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 8.1e-17 90.9 78 56.4
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 1.8e-16 89.7 66 56.1
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 5.8e-15 84.7 54 63.0
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 4.6e-12 75.1 60 55.0
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 3.0e-11 72.4 48 64.6
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 4.3e-10 68.6 37 67.6
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 2.9e-06 55.8 58 44.8
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 2.9e-06 55.8 63 41.3


User provided reference genes

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