Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 9.0e-101 370.2 175 100.0
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 6.5e-59 231.1 159 63.5
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 1.7e-54 216.5 165 60.6
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 1.4e-53 213.4 165 57.6
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 1.8e-53 213.0 155 62.6
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 7.0e-53 211.1 160 60.0
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 1.6e-52 209.9 155 63.2
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 1.6e-52 209.9 161 58.4
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 2.0e-52 209.5 157 61.8
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 2.7e-52 209.1 155 61.9
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 4.5e-52 208.4 159 57.9
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 5.9e-52 208.0 157 61.8
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 2.9e-51 205.7 159 60.4
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 2.9e-51 205.7 159 59.1
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 2.9e-51 205.7 159 58.5
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 2.9e-51 205.7 156 60.9
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 3.8e-51 205.3 159 59.7
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 5.0e-51 204.9 159 61.0
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 5.0e-51 204.9 156 60.9
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 6.5e-51 204.5 156 59.6
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 8.5e-51 204.1 156 60.3
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 1.1e-50 203.8 156 60.3
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 1.1e-50 203.8 160 59.4
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 1.1e-50 203.8 155 60.0
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 1.5e-50 203.4 156 59.6
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 1.5e-50 203.4 156 60.9
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 1.5e-50 203.4 159 58.5
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 3.2e-50 202.2 155 60.0
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 4.2e-50 201.8 138 60.9
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 4.2e-50 201.8 156 59.0
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 5.5e-50 201.4 159 59.1
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 7.2e-50 201.1 159 57.9
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 9.4e-50 200.7 154 59.7
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 9.4e-50 200.7 159 57.9
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 9.4e-50 200.7 157 56.7
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 1.2e-49 200.3 159 57.9
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 1.2e-49 200.3 159 57.9
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 1.6e-49 199.9 159 57.9
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 1.6e-49 199.9 159 57.9
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 1.6e-49 199.9 156 58.3
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 1.6e-49 199.9 159 57.9
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 2.1e-49 199.5 159 57.9
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 2.1e-49 199.5 154 59.1
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 3.6e-49 198.7 159 57.2
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 3.6e-49 198.7 155 60.0
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 4.7e-49 198.4 159 58.5
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 4.7e-49 198.4 159 58.5
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 4.7e-49 198.4 155 58.7
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 4.7e-49 198.4 155 58.7
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 6.1e-49 198.0 156 59.6
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 8.0e-49 197.6 159 57.9
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 8.0e-49 197.6 154 58.4
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 8.0e-49 197.6 155 59.4
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 1.0e-48 197.2 155 59.4
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 3.0e-48 195.7 159 55.3
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 3.0e-48 195.7 153 58.8
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 3.0e-48 195.7 157 55.4
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 4.0e-48 195.3 159 55.3
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 5.2e-48 194.9 162 58.0
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 5.2e-48 194.9 159 58.5
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 5.2e-48 194.9 159 56.0
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 6.8e-48 194.5 155 58.7
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 6.8e-48 194.5 155 58.7
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 6.8e-48 194.5 157 54.8
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.2e-47 193.7 159 57.2
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 1.5e-47 193.4 155 57.4
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 1.5e-47 193.4 161 56.5
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 2.0e-47 193.0 159 56.6
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 2.6e-47 192.6 159 56.6
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 2.6e-47 192.6 155 56.8
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 3.4e-47 192.2 159 57.2
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 3.4e-47 192.2 159 54.7
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 4.4e-47 191.8 155 56.8
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 5.7e-47 191.4 159 57.9
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 7.5e-47 191.0 159 56.6
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 7.5e-47 191.0 155 56.8
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 7.5e-47 191.0 155 56.8
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 1.3e-46 190.3 155 57.4
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.3e-46 190.3 155 58.1
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 1.7e-46 189.9 159 56.0
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 1.7e-46 189.9 163 56.4
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 3.7e-46 188.7 159 57.9
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.1e-45 187.2 139 61.9
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 1.1e-45 187.2 160 50.6
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 3.5e-44 182.2 155 55.5
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 6.6e-43 177.9 160 53.8
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 2.8e-41 172.6 194 44.8
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 1.8e-40 169.9 159 52.8
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 6.4e-38 161.4 122 63.1
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 1.5e-34 150.2 256 34.8
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 9.5e-34 147.5 116 59.5
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 5.8e-31 138.3 97 62.9
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 4.6e-28 128.6 83 67.5
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 4.6e-28 128.6 82 67.1
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 7.8e-28 127.9 109 59.6
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 3.3e-26 122.5 86 61.6
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 4.3e-26 122.1 80 62.5
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 1.7e-19 100.1 90 53.3
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 1.4e-16 90.5 81 54.3
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 9.9e-15 84.3 86 47.7
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 2.2e-14 83.2 83 49.4
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 4.6e-12 75.5 80 47.5
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 3.0e-11 72.8 79 45.6
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 1.9e-10 70.1 80 43.8
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 2.4e-08 63.2 73 49.3


User provided reference genes

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