Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39512 Sequoiadendron giganteum HOM05D006988 ORTHO05D008731 1.1e-122 443.4 225 100.0
TAR636G1375 Trochodendron aralioides HOM05D006988 ORTHO05D008731 3.9e-72 275.4 181 70.7
Nn6g33931 Nelumbo nucifera HOM05D006988 ORTHO05D008731 1.5e-71 273.5 181 71.3
AUR62013709 Chenopodium quinoa HOM05D006988 ORTHO05D008731 5.6e-71 271.6 208 65.4
COL.COLO4_12466 Corchorus olitorius HOM05D006988 ORTHO05D008731 9.6e-71 270.8 194 67.0
AUR62004148 Chenopodium quinoa HOM05D006988 ORTHO05D008731 1.2e-70 270.4 208 64.9
EL10Ac1g00818 Beta vulgaris HOM05D006988 ORTHO05D008731 1.6e-70 270.0 196 65.8
MELO3C021141.2 Cucumis melo HOM05D006988 ORTHO05D008731 2.1e-70 269.6 175 71.4
Duzib133G0505 Durio zibethinus HOM05D006988 ORTHO05D008731 2.1e-70 269.6 207 62.8
CANSAT01G0747 Cannabis sativa HOM05D006988 ORTHO05D008731 3.6e-70 268.9 179 72.6
Potri.014G058400 Populus trichocarpa HOM05D006988 ORTHO05D008731 3.6e-70 268.9 180 70.6
Atru.chr5.214 Acer truncatum HOM05D006988 ORTHO05D008731 4.7e-70 268.5 182 70.3
Rhsim07G0032500 Rhododendron simsii HOM05D006988 ORTHO05D008731 8.1e-70 267.7 175 70.3
CSS0001978 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 1.1e-69 267.3 207 62.3
CSS0011747 Camellia sinensis var. sinensis HOM05D006988 ORTHO05D008731 1.1e-69 267.3 226 59.7
ClCG06G003000 Citrullus lanatus HOM05D006988 ORTHO05D008731 1.1e-69 267.3 175 70.9
Lj1g0025695 Lotus japonicus HOM05D006988 ORTHO05D008731 1.1e-69 267.3 180 69.4
MBI04_g09512_MAGBIO Magnolia biondii HOM05D006988 ORTHO05D008731 1.4e-69 266.9 181 69.6
arahy.Tifrunner.gnm1.ann1.EWF75K Arachis hypogaea HOM05D006988 ORTHO05D008731 2.4e-69 266.2 180 70.6
arahy.Tifrunner.gnm1.ann1.I2GGUW Arachis hypogaea HOM05D006988 ORTHO05D008731 2.4e-69 266.2 180 70.6
Haze_02728 Corylus avellana HOM05D006988 ORTHO05D008731 2.4e-69 266.2 180 67.8
CsaV3_6G009120 Cucumis sativus L. HOM05D006988 ORTHO05D008731 2.4e-69 266.2 208 63.0
Aqoxy7G00790 Aquilegia oxysepala HOM05D006988 ORTHO05D008731 4.0e-69 265.4 192 66.1
Gohir.D07G153600 Gossypium hirsutum HOM05D006988 ORTHO05D008731 4.0e-69 265.4 180 70.0
FAN03G1007 Fragaria x ananassa HOM05D006988 ORTHO05D008731 5.2e-69 265.0 216 59.7
Hund17063 Selenicereus undatus HOM05D006988 ORTHO05D008731 5.2e-69 265.0 181 69.1
Sed0016586 Sechium edule HOM05D006988 ORTHO05D008731 6.8e-69 264.6 175 70.3
Gorai.001G175700 Gossypium raimondii HOM05D006988 ORTHO05D008731 1.2e-68 263.8 180 69.4
Lj9A563T51 Lonicera japonica HOM05D006988 ORTHO05D008731 1.2e-68 263.8 210 61.4
Phvul.008G157000 Phaseolus vulgaris HOM05D006988 ORTHO05D008731 1.2e-68 263.8 180 67.8
QL04p035766 Quercus lobata HOM05D006988 ORTHO05D008731 1.2e-68 263.8 180 69.4
VMungo1383G3408 Vigna mungo HOM05D006988 ORTHO05D008731 1.2e-68 263.8 181 68.5
Gohir.A07G147500 Gossypium hirsutum HOM05D006988 ORTHO05D008731 1.5e-68 263.5 175 71.4
Medtr7g444820 Medicago truncatula HOM05D006988 ORTHO05D008731 1.5e-68 263.5 179 69.3
Peaxi162Scf00350g00014 Petunia axillaris HOM05D006988 ORTHO05D008731 1.5e-68 263.5 218 61.5
Sabra14G0042600 Salix brachista HOM05D006988 ORTHO05D008731 2.0e-68 263.1 180 69.4
CiPaw.13G030900 Carya illinoinensis HOM05D006988 ORTHO05D008731 3.4e-68 262.3 202 63.4
Ca_27093_v3 Cicer arietinum L. HOM05D006988 ORTHO05D008731 3.4e-68 262.3 180 67.8
Dinv43657 Davidia involucrata HOM05D006988 ORTHO05D008731 3.4e-68 262.3 180 68.3
Thecc.01G386200 Theobroma cacao HOM05D006988 ORTHO05D008731 3.4e-68 262.3 180 68.3
FvH4_7g10720 Fragaria vesca HOM05D006988 ORTHO05D008731 5.8e-68 261.5 216 59.7
Hma1.2p1_0341F.1_g130300 Hydrangea macrophylla HOM05D006988 ORTHO05D008731 9.9e-68 260.8 173 69.4
Solyc10g018590.2 Solanum lycopersicum HOM05D006988 ORTHO05D008731 9.9e-68 260.8 175 70.9
FAN06G2548 Fragaria x ananassa HOM05D006988 ORTHO05D008731 1.7e-67 260.0 216 59.3
FAN06G3033 Fragaria x ananassa HOM05D006988 ORTHO05D008731 1.7e-67 260.0 216 58.8
Sopen10g008330 Solanum pennellii HOM05D006988 ORTHO05D008731 2.2e-67 259.6 175 69.7
PSO170G6265 Papaver somniferum HOM05D006988 ORTHO05D008731 2.9e-67 259.2 181 70.2
MD07G1111900 Malus domestica HOM05D006988 ORTHO05D008731 3.8e-67 258.8 180 67.8
CARHR248070 Cardamine hirsuta HOM05D006988 ORTHO05D008731 6.4e-67 258.1 180 67.2
Glyma.11G164037 Glycine max HOM05D006988 ORTHO05D008731 6.4e-67 258.1 180 67.2
Cc02_g24580 Coffea canephora HOM05D006988 ORTHO05D008731 8.4e-67 257.7 178 67.4
Prupe.2G135300 Prunus persica HOM05D006988 ORTHO05D008731 8.4e-67 257.7 180 66.7
THA.LOC104814078 Tarenaya hassleriana HOM05D006988 ORTHO05D008731 8.4e-67 257.7 182 66.5
AT4G00030 Arabidopsis thaliana HOM05D006988 ORTHO05D008731 1.1e-66 257.3 175 67.4
Manes.01G270400 Manihot esculenta HOM05D006988 ORTHO05D008731 1.1e-66 257.3 181 68.5
SalBow5G4855 Salvia bowleyana HOM05D006988 ORTHO05D008731 1.1e-66 257.3 198 61.1
PGSC0003DMG400011763 Solanum tuberosum HOM05D006988 ORTHO05D008731 2.4e-66 256.1 208 63.0
Sp6g00080 Schrenkiella parvula HOM05D006988 ORTHO05D008731 3.2e-66 255.8 174 68.4
Glyma.01G076100 Glycine max HOM05D006988 ORTHO05D008731 1.6e-65 253.4 175 66.9
Migut.B01575 Erythranthe guttata HOM05D006988 ORTHO05D008731 3.5e-65 252.3 191 62.3
ATR0317G076 Amborella trichopoda HOM05D006988 ORTHO05D008731 6.0e-65 251.5 181 65.7
Carub.0006s3719 Capsella rubella HOM05D006988 ORTHO05D008731 6.0e-65 251.5 174 67.8
BcaB01g02207 Brassica carinata HOM05D006988 ORTHO05D008731 7.8e-65 251.1 174 67.8
C09p00070 Brassica napus HOM05D006988 ORTHO05D008731 7.8e-65 251.1 174 67.2
BraA09t35681Z Brassica rapa HOM05D006988 ORTHO05D008731 7.8e-65 251.1 174 67.2
CAN.G160.69 Capsicum annuum HOM05D006988 ORTHO05D008731 1.3e-64 250.4 176 67.0
Nitab4.5_0000882g0050 Nicotiana tabacum HOM05D006988 ORTHO05D008731 1.3e-64 250.4 190 65.8
BcaC04g24207 Brassica carinata HOM05D006988 ORTHO05D008731 2.3e-64 249.6 174 67.2
BolC9t52942H Brassica oleracea HOM05D006988 ORTHO05D008731 2.3e-64 249.6 174 67.2
Lsat_1_v5_gn_7_10320 Lactuca sativa HOM05D006988 ORTHO05D008731 6.6e-64 248.1 182 63.7
AL6G53480 Arabidopsis lyrata HOM05D006988 ORTHO05D008731 1.1e-63 247.3 174 66.1
Mapoly0004s0296 Marchantia polymorpha HOM05D006988 ORTHO05D008731 1.9e-63 246.5 168 68.5
Nitab4.5_0001501g0030 Nicotiana tabacum HOM05D006988 ORTHO05D008731 5.6e-63 245.0 170 70.0
DCAR_031865 Daucus carota HOM05D006988 ORTHO05D008731 9.6e-63 244.2 175 64.0
Pp3c14_7270 Physcomitrium patens HOM05D006988 ORTHO05D008731 1.4e-61 240.4 173 68.8
SMO367G0814 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 1.8e-61 240.0 173 64.7
COL.COLO4_37993 Corchorus olitorius HOM05D006988 ORTHO05D008731 3.1e-61 239.2 178 63.5
ECA236G3211 Erigeron canadensis HOM05D006988 ORTHO05D008731 4.0e-61 238.8 176 63.6
HanXRQChr06g0168881 Helianthus annuus HOM05D006988 ORTHO05D008731 9.0e-61 237.7 173 64.7
SMO367G0459 Selaginella moellendorffii HOM05D006988 ORTHO05D008731 9.0e-61 237.7 173 64.2
Aa31LG5G100 Aethionema arabicum HOM05D006988 ORTHO05D008731 1.5e-60 236.9 192 60.4
TPR.G39083 Trifolium pratense HOM05D006988 ORTHO05D008731 4.2e-58 228.8 143 74.1
Os04g0551700 Oryza sativa ssp. japonica HOM05D006988 ORTHO05D008731 7.1e-58 228.0 173 61.8
Zm00001eb257570 Zea mays HOM05D006988 ORTHO05D008731 7.9e-57 224.6 172 62.2
SGA_v2.0_scaffold153G36954 Striga asiatica HOM05D006988 ORTHO05D008731 1.3e-56 223.8 217 51.2
Ciclev10022767m.g Citrus clementina HOM05D006988 ORTHO05D008731 3.0e-56 222.6 140 72.1
GSVIVG01018209001 Vitis vinifera HOM05D006988 ORTHO05D008731 1.9e-55 219.9 140 72.9
TWI59G0585 Tripterygium wilfordii HOM05D006988 ORTHO05D008731 9.6e-55 217.6 180 61.1
Ah.16g110010 Amaranthus hybridus HOM05D006988 ORTHO05D008731 1.1e-53 214.2 172 60.5
RcHm_v2.0_Chr1g0348671 Rosa chinensis HOM05D006988 ORTHO05D008731 2.4e-53 213.0 185 56.2
Sc23g0003890 Simmondsia chinensis HOM05D006988 ORTHO05D008731 4.5e-52 208.8 163 63.8
Cpa.g.sc620.2 Carica papaya HOM05D006988 ORTHO05D008731 6.4e-51 204.9 174 62.1
FAN01G2452 Fragaria x ananassa HOM05D006988 ORTHO05D008731 4.6e-49 198.7 186 54.3
MSTRG.20719 Avicennia marina HOM05D006988 ORTHO05D008731 1.0e-48 197.6 154 63.0
Eucgr.D02502 Eucalyptus grandis HOM05D006988 ORTHO05D008731 8.7e-48 194.5 143 65.0
SMO367G0117 Selaginella moellendorffii HOM05D012767 ORTHO05D008731 5.3e-45 185.3 185 52.4
Psat3g157120 Pisum sativum HOM05D006988 ORTHO05D008731 3.9e-40 169.1 139 61.2
AagrBONN_evm.TU.Sc2ySwM_362.1347 Anthoceros agrestis HOM05D006988 ORTHO05D008731 5.1e-40 168.7 151 60.9
vmacro13459 Vaccinium macrocarpon HOM05D006988 ORTHO05D008731 5.1e-40 168.7 121 67.8
Thhalv10028565m.g Eutrema salsugineum HOM05D000447 ORTHO05D000315 1.2e-36 157.5 145 56.6
Cre14.g618050 Chlamydomonas reinhardtii HOM05D006988 ORTHO05D008731 2.9e-35 152.9 174 44.8
C03p91270 Brassica napus HOM05D006988 ORTHO05D008731 5.5e-34 148.7 122 57.4
PRCOL_00005443 Prasinoderma coloniale HOM05D006988 ORTHO05D008731 1.8e-32 143.7 237 37.6
BcaC03g13893 Brassica carinata HOM05D006988 ORTHO05D008731 3.0e-32 142.9 189 43.9
C02p10970 Brassica napus HOM05D006988 ORTHO05D008731 2.6e-28 129.8 85 70.6
BolC2t07167H Brassica oleracea HOM05D006988 ORTHO05D008731 2.6e-28 129.8 85 70.6
MCO12G266 Micromonas commoda HOM05D006988 ORTHO05D008731 2.3e-24 116.7 174 38.5
BcaC01g03084 Brassica carinata HOM05D006988 ORTHO05D008731 3.9e-24 115.9 169 37.3
Lalb_Chr19g0127481 Lupinus albus HOM05D006988 ORTHO05D008731 2.4e-21 106.7 54 83.3
unitig_26.g9723 Utricularia gibba HOM05D000502 ORTHO05D000356 9.1e-21 104.8 81 61.7
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 6.5e-19 98.6 84 57.1
A09p00790 Brassica napus HOM05D006988 ORTHO05D008731 6.7e-16 88.6 68 60.3
Actinidia12175 Actinidia chinensis HOM05D006988 ORTHO05D008731 1.7e-14 84.0 81 51.9
BolC3t17906H Brassica oleracea HOM05D001199 ORTHO05D001013 2.2e-11 73.6 62 51.6
C03p56160 Brassica napus HOM05D001199 ORTHO05D001013 4.2e-10 69.3 64 50.0
Dinv13821 Davidia involucrata HOM05D006988 ORTHO05D008731 4.2e-10 69.3 60 55.0
Actinidia22773 Actinidia chinensis HOM05D006988 ORTHO05D008731 1.4e-08 64.3 33 78.8
Lalb_Chr19g0127491 Lupinus albus HOM05D006988 ORTHO05D008731 3.3e-07 59.7 51 54.9
HPP92_016149 Vanilla planifolia HOM05D005663 ORTHO05D007258 7.5e-07 58.5 204 24.5
RcHm_v2.0_Chr1g0348661 Rosa chinensis HOM05D006988 ORTHO05D008731 1.3e-06 57.8 32 78.1
Haze_25195 Corylus avellana HOM05D005663 ORTHO05D007258 1.7e-06 57.4 188 25.0
GSVIVG01026586001 Vitis vinifera HOM05D005663 ORTHO05D007258 1.7e-06 57.4 194 23.7
Mapoly0058s0022 Marchantia polymorpha HOM05D005663 ORTHO05D007258 2.8e-06 56.6 202 25.7
Ciclev10026263m.g Citrus clementina HOM05D005663 ORTHO05D007258 4.8e-06 55.8 193 23.8
Pp3c6_24510 Physcomitrium patens HOM05D006358 ORTHO05D008185 6.3e-06 55.5 143 25.2
PRCOL_00001829 Prasinoderma coloniale HOM05D002234 ORTHO05D002254 6.3e-06 55.5 125 32.8
CDE12G0169 Ceratophyllum demersum HOM05D005663 ORTHO05D007258 8.2e-06 55.1 217 24.4
Haze_25187 Corylus avellana HOM05D005663 ORTHO05D007258 8.2e-06 55.1 140 25.7


User provided reference genes

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