Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 9.2e-37 156.4 79 100.0
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 2.1e-12 75.5 72 50.0
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 2.7e-12 75.1 72 55.6
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 3.5e-12 74.7 72 50.0
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 4.6e-12 74.3 72 51.4
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 4.6e-12 74.3 72 48.6
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 6.0e-12 73.9 75 50.7
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 6.0e-12 73.9 70 51.4
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 6.0e-12 73.9 70 54.3
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 6.0e-12 73.9 72 48.6
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 7.9e-12 73.6 72 47.2
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 7.9e-12 73.6 72 47.2
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 1.0e-11 73.2 70 51.4
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.0e-11 73.2 72 47.2
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 1.0e-11 73.2 72 47.2
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 1.3e-11 72.8 70 51.4
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.3e-11 72.8 70 51.4
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 1.3e-11 72.8 72 47.2
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.8e-11 72.4 72 47.2
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.8e-11 72.4 71 47.9
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 1.8e-11 72.4 72 45.8
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 1.8e-11 72.4 72 47.2
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 1.8e-11 72.4 72 50.0
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 2.3e-11 72.0 72 45.8
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 2.3e-11 72.0 72 50.0
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 2.3e-11 72.0 73 52.1
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 3.0e-11 71.6 72 45.8
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 3.0e-11 71.6 72 45.8
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 3.0e-11 71.6 72 45.8
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 3.0e-11 71.6 72 45.8
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 3.9e-11 71.2 72 51.4
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 3.9e-11 71.2 71 50.7
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 3.9e-11 71.2 70 51.4
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 5.1e-11 70.9 70 48.6
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 5.1e-11 70.9 72 47.2
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 5.1e-11 70.9 72 47.2
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 5.1e-11 70.9 72 44.4
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 5.1e-11 70.9 72 47.2
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 5.1e-11 70.9 72 48.6
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 6.7e-11 70.5 72 52.8
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 6.7e-11 70.5 72 50.0
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 6.7e-11 70.5 72 50.0
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 6.7e-11 70.5 70 50.0
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.1e-10 69.7 72 50.0
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.1e-10 69.7 72 50.0
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 1.1e-10 69.7 72 48.6
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 1.1e-10 69.7 70 52.9
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.1e-10 69.7 72 47.2
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.9e-10 68.9 72 44.4
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 1.9e-10 68.9 72 48.6
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.9e-10 68.9 72 48.6
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.9e-10 68.9 72 48.6
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 2.5e-10 68.6 70 50.0
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 2.5e-10 68.6 70 50.0
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 2.5e-10 68.6 70 48.6
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.5e-10 68.6 71 47.9
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 2.5e-10 68.6 72 45.8
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.5e-10 68.6 72 47.2
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 3.3e-10 68.2 72 50.0
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 3.3e-10 68.2 71 46.5
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 3.3e-10 68.2 71 46.5
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 3.3e-10 68.2 72 44.4
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 7.4e-10 67.0 70 44.3
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 7.4e-10 67.0 70 50.0
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 9.6e-10 66.6 72 48.6
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 9.6e-10 66.6 70 47.1
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 9.6e-10 66.6 71 47.9
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.3e-09 66.2 71 47.9
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.1e-09 65.5 70 48.6
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 2.1e-09 65.5 70 48.6
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 2.8e-09 65.1 70 48.6
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 2.8e-09 65.1 70 48.6
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 3.7e-09 64.7 72 45.8
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 3.7e-09 64.7 71 45.1
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 3.7e-09 64.7 70 48.6
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 3.7e-09 64.7 70 48.6
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 4.8e-09 64.3 70 48.6
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 4.8e-09 64.3 70 42.9
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 4.8e-09 64.3 71 50.7
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 6.2e-09 63.9 70 47.1
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 8.1e-09 63.5 70 47.1
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 8.1e-09 63.5 70 47.1
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 1.4e-08 62.8 72 43.1
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 1.8e-08 62.4 72 43.1
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 3.1e-08 61.6 72 41.7
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 4.0e-08 61.2 72 43.1
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 5.3e-08 60.8 70 47.1
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 6.9e-08 60.5 72 40.3
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 6.9e-08 60.5 70 47.1
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 2.0e-07 58.9 76 44.7
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 2.6e-07 58.5 72 38.9
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 4.5e-07 57.8 72 40.3
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 8.4e-06 53.5 56 46.4
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 8.4e-06 53.5 55 43.6


User provided reference genes

Program Settings