Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39281 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 1.3e-156 556.2 266 100.0
arahy.Tifrunner.gnm1.ann1.H38MEV Arachis hypogaea HOM05D000963 ORTHO05D010073 3.8e-66 255.8 139 89.9
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.9e-57 226.9 199 61.8
Sed0001563 Sechium edule HOM05D000963 ORTHO05D010073 1.2e-56 224.2 131 85.5
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.7e-55 218.0 255 50.6
LjContig00319g0016523 Lotus japonicus HOM05D000963 ORTHO05D010073 1.9e-54 216.9 284 47.9
Sed0028031 Sechium edule HOM05D000963 ORTHO05D010073 8.4e-50 201.4 147 73.5
QL10p017078 Quercus lobata HOM05D000963 ORTHO05D010073 4.3e-46 189.1 207 54.1
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 9.6e-46 188.0 135 74.1
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 2.8e-45 186.4 135 73.3
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 6.9e-44 181.8 151 65.6
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 4.5e-43 179.1 206 52.9
CDE02G3457 Ceratophyllum demersum HOM05D000963 ORTHO05D010073 1.9e-41 173.7 91 91.2
FAN13G1378 Fragaria x ananassa HOM05D000963 ORTHO05D010073 2.5e-41 173.3 117 76.1
arahy.Tifrunner.gnm1.ann1.0FXL97 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.2e-40 171.0 91 90.1
unitig_91.g26521 Utricularia gibba HOM05D000963 ORTHO05D010201 1.2e-40 171.0 90 91.1
arahy.Tifrunner.gnm1.ann1.WPV0UJ Arachis hypogaea HOM05D000963 ORTHO05D010073 1.0e-39 167.9 91 89.0
arahy.Tifrunner.gnm1.ann1.F7VFKS Arachis hypogaea HOM05D000963 ORTHO05D010073 9.7e-38 161.4 135 63.7
arahy.Tifrunner.gnm1.ann1.LW54SX Arachis hypogaea HOM05D000963 ORTHO05D010073 4.2e-33 146.0 257 40.9
arahy.Tifrunner.gnm1.ann1.IG3D37 Arachis hypogaea HOM05D000963 ORTHO05D010073 3.6e-32 142.9 253 39.9
arahy.Tifrunner.gnm1.ann1.3JL12K Arachis hypogaea HOM05D000963 ORTHO05D010073 1.3e-29 134.4 251 39.8
arahy.Tifrunner.gnm1.ann1.9ZA4TL Arachis hypogaea HOM05D000963 ORTHO05D010073 1.3e-29 134.4 251 39.8
arahy.Tifrunner.gnm1.ann1.MCAP06 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.3e-29 134.4 251 39.8
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 2.8e-29 133.3 90 75.6
Hma1.2p1_0431F.1_g151580 Hydrangea macrophylla HOM05D000963 ORTHO05D010073 3.7e-29 132.9 166 48.8
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.4e-28 131.0 62 98.4
Medtr4g006070 Medicago truncatula HOM05D000963 ORTHO05D010073 1.8e-28 130.6 197 41.6
arahy.Tifrunner.gnm1.ann1.AKG7GD Arachis hypogaea HOM05D000963 ORTHO05D010073 4.1e-28 129.4 124 58.1
arahy.Tifrunner.gnm1.ann1.V5YKW3 Arachis hypogaea HOM05D000963 ORTHO05D010073 4.1e-28 129.4 124 58.1
arahy.Tifrunner.gnm1.ann1.XUX2EX Arachis hypogaea HOM05D000963 ORTHO05D004271 6.9e-28 128.6 112 61.6
Medtr4g451295 Medicago truncatula HOM05D000963 ORTHO05D010073 1.2e-27 127.9 61 96.7
Lsat_1_v5_gn_0_47661 Lactuca sativa HOM05D000963 ORTHO05D010073 2.2e-26 123.6 120 57.5
Lsat_1_v5_gn_2_97101 Lactuca sativa HOM05D000963 ORTHO05D010073 2.2e-26 123.6 120 57.5
Lsat_1_v5_gn_6_94240 Lactuca sativa HOM05D000963 ORTHO05D010073 2.2e-26 123.6 120 57.5
Lsat_1_v5_gn_8_139860 Lactuca sativa HOM05D000963 ORTHO05D010073 2.2e-26 123.6 120 57.5
arahy.Tifrunner.gnm1.ann1.W1SKJ5 Arachis hypogaea HOM05D000963 ORTHO05D013225 6.5e-26 122.1 57 98.2
Gohir.A12G138580 Gossypium hirsutum HOM05D000963 ORTHO05D010073 1.1e-25 121.3 64 87.5
Sc21g0003830 Simmondsia chinensis HOM05D000963 ORTHO05D013492 1.4e-25 120.9 119 58.8
Psat3g011600 Pisum sativum HOM05D000963 ORTHO05D010073 5.5e-25 119.0 108 62.0
Gorai.011G106300 Gossypium raimondii HOM05D000963 ORTHO05D010073 7.2e-25 118.6 62 87.1
SEGI_01254 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 2.7e-24 116.7 66 81.8
Gohir.A04G039240 Gossypium hirsutum HOM05D000963 ORTHO05D010073 2.3e-23 113.6 53 98.1
arahy.Tifrunner.gnm1.ann1.BP3EV9 Arachis hypogaea HOM05D000963 ORTHO05D010073 6.7e-23 112.1 120 53.3
Gohir.1Z056500 Gossypium hirsutum HOM05D000963 ORTHO05D010073 6.7e-23 112.1 53 96.2
Sopen10g016580 Solanum pennellii HOM05D000963 ORTHO05D010073 6.7e-23 112.1 132 53.0
Migut.D01397 Erythranthe guttata HOM05D000963 ORTHO05D010201 8.8e-23 111.7 86 67.4
Sopen11g020210 Solanum pennellii HOM05D000963 ORTHO05D013225 8.8e-23 111.7 66 83.3
arahy.Tifrunner.gnm1.ann1.41YVYJ Arachis hypogaea HOM05D000963 ORTHO05D010201 1.3e-21 107.8 59 83.1
Oeu029257.1 Olea europaea HOM05D000963 ORTHO05D010073 1.7e-21 107.5 121 52.9
EL10Ac4g08799 Beta vulgaris HOM05D000963 ORTHO05D010073 1.8e-20 104.0 54 87.0
Gohir.D04G096660 Gossypium hirsutum HOM05D000963 ORTHO05D010073 5.9e-19 99.0 53 84.9
Gorai.009G238500 Gossypium raimondii HOM05D000963 ORTHO05D010073 1.3e-18 97.8 55 81.8
Gohir.1Z049892 Gossypium hirsutum HOM05D000963 ORTHO05D010073 3.2e-17 93.2 42 97.6
Gorai.007G326100 Gossypium raimondii HOM05D000963 ORTHO05D010073 4.2e-17 92.8 53 84.9
arahy.Tifrunner.gnm1.ann1.D65SDJ Arachis hypogaea HOM05D000216 ORTHO05D031495 2.0e-14 84.0 48 87.5
Lsat_1_v5_gn_4_147721 Lactuca sativa HOM05D000963 ORTHO05D010201 2.0e-14 84.0 50 78.0
SGA_v2.0_scaffold222G42797 Striga asiatica HOM05D000963 ORTHO05D010073 7.4e-14 82.0 51 76.5
TPR.G38799 Trifolium pratense HOM05D001219 ORTHO05D001017 9.7e-14 81.6 55 72.7
SEGI_18787 Sequoiadendron giganteum HOM05D000963 ORTHO05D010073 1.3e-13 81.3 39 94.9
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 2.2e-13 80.5 48 81.2
arahy.Tifrunner.gnm1.ann1.EF1F4B Arachis hypogaea HOM05D000963 ORTHO05D010073 2.8e-13 80.1 130 43.1
Sopen08g015170 Solanum pennellii HOM05D000963 ORTHO05D031495 2.8e-13 80.1 47 83.0
arahy.Tifrunner.gnm1.ann1.AT0L4S Arachis hypogaea HOM05D000963 ORTHO05D031495 3.7e-13 79.7 47 78.7
arahy.Tifrunner.gnm1.ann1.L8KA6F Arachis hypogaea HOM05D000963 ORTHO05D010073 1.1e-12 78.2 104 45.2
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 1.4e-12 77.8 78 59.0
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 1.2e-11 74.7 40 90.0
arahy.Tifrunner.gnm1.ann1.Q2LPLX Arachis hypogaea HOM05D009256 ORTHO05D011704 1.2e-11 74.7 59 66.1
arahy.Tifrunner.gnm1.ann1.V5LEJ9 Arachis hypogaea HOM05D009256 ORTHO05D011704 1.2e-11 74.7 59 66.1
SEGI_06644 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 1.2e-11 74.7 122 42.6
SEGI_13999 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 1.2e-11 74.7 122 42.6
SEGI_16475 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 1.2e-11 74.7 122 42.6
SEGI_23954 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 1.2e-11 74.7 122 42.6
Medtr4g076920 Medicago truncatula HOM05D008922 ORTHO05D010978 2.0e-11 73.9 34 97.1
arahy.Tifrunner.gnm1.ann1.AH21CB Arachis hypogaea HOM05D000963 ORTHO05D010658 7.7e-11 72.0 79 54.4
arahy.Tifrunner.gnm1.ann1.QZF0BL Arachis hypogaea HOM05D009256 ORTHO05D011704 7.7e-11 72.0 91 49.5
TAR629G1300 Trochodendron aralioides HOM05D009256 ORTHO05D011704 2.2e-10 70.5 57 64.9
arahy.Tifrunner.gnm1.ann1.WH3GKX Arachis hypogaea HOM05D009256 ORTHO05D011704 3.8e-10 69.7 52 69.2
TPR.G11370 Trifolium pratense HOM05D009256 ORTHO05D011704 3.8e-10 69.7 52 69.2
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 5.0e-10 69.3 39 84.6
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 5.0e-10 69.3 39 84.6
FAN08G1097 Fragaria x ananassa HOM05D009256 ORTHO05D011704 1.5e-09 67.8 52 65.4
Medtr4g091430 Medicago truncatula HOM05D009256 ORTHO05D011704 2.5e-09 67.0 88 47.7
BolSC37t60801H Brassica oleracea HOM05D000963 ORTHO05D010073 3.2e-09 66.6 37 83.8
DCAR_001521 Daucus carota HOM05D000963 ORTHO05D010073 3.2e-09 66.6 39 82.1
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 3.2e-09 66.6 39 82.1
FAN06G1734 Fragaria x ananassa HOM05D000963 ORTHO05D010073 4.2e-09 66.2 39 79.5
BNapus_Darmor_BZH_scaffold_234p00110 Brassica napus HOM05D009256 ORTHO05D011704 5.5e-09 65.9 52 67.3
BraSC77t46657Z Brassica rapa HOM05D009256 ORTHO05D011704 5.5e-09 65.9 52 67.3
Actinidia28233 Actinidia chinensis HOM05D000963 ORTHO05D010073 9.4e-09 65.1 39 79.5
arahy.Tifrunner.gnm1.ann1.FXQ5AB Arachis hypogaea HOM05D000963 ORTHO05D010073 1.6e-08 64.3 102 43.1
Sopen10g009710 Solanum pennellii HOM05D000014 ORTHO05D000093 1.6e-08 64.3 52 65.4
GSVIVG01023557001 Vitis vinifera HOM05D000092 ORTHO05D000042 2.7e-08 63.5 29 93.1
FAN20G2381 Fragaria x ananassa HOM05D000963 ORTHO05D010073 4.7e-08 62.8 39 79.5
Nitab4.5_0006727g0010 Nicotiana tabacum HOM05D000963 ORTHO05D010073 4.7e-08 62.8 79 49.4
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 1.0e-07 61.6 51 56.9
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 1.0e-07 61.6 51 56.9
SEGI_38700 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 1.4e-07 61.2 101 40.6
Sc09g0006440 Simmondsia chinensis HOM05D000963 ORTHO05D010073 1.4e-07 61.2 39 79.5
SEGI_15462 Sequoiadendron giganteum HOM05D009256 ORTHO05D011704 2.3e-07 60.5 52 61.5
Sopen05g013060 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-07 59.3 39 76.9
FAN01G1778 Fragaria x ananassa HOM05D000963 ORTHO05D010073 6.7e-07 58.9 48 62.5
arahy.Tifrunner.gnm1.ann1.RWFL12 Arachis hypogaea HOM05D000729 ORTHO05D002596 8.8e-07 58.5 28 85.7
Phvul.002G181700 Phaseolus vulgaris HOM05D000963 ORTHO05D010073 8.8e-07 58.5 53 58.5
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 1.2e-06 58.2 41 68.3
Nitab4.5_0007400g0110 Nicotiana tabacum HOM05D000963 ORTHO05D010073 2.6e-06 57.0 38 76.3
arahy.Tifrunner.gnm1.ann1.RD3GDK Arachis hypogaea HOM05D000963 ORTHO05D010073 7.5e-06 55.5 35 80.0
Phvul.008G179700 Phaseolus vulgaris HOM05D000963 ORTHO05D010073 9.7e-06 55.1 34 79.4


User provided reference genes

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