Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 3.9e-60 234.6 116 100.0
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 5.3e-25 117.9 99 57.6
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 5.0e-23 111.3 102 50.0
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 8.5e-23 110.5 104 54.8
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 3.2e-22 108.6 100 55.0
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 5.5e-22 107.8 100 53.0
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 7.2e-22 107.5 104 50.0
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 7.2e-22 107.5 102 50.0
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 1.2e-21 106.7 94 54.3
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 2.7e-21 105.5 94 53.2
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 1.4e-20 103.2 102 49.0
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 1.8e-20 102.8 100 46.0
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 2.3e-20 102.4 96 53.1
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 4.0e-20 101.7 101 47.5
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 5.2e-20 101.3 104 47.1
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 5.2e-20 101.3 106 47.2
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 6.8e-20 100.9 104 45.2
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 6.8e-20 100.9 104 50.0
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 8.8e-20 100.5 94 50.0
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 8.8e-20 100.5 94 51.1
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 1.2e-19 100.1 106 46.2
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 2.0e-19 99.4 94 52.1
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 2.6e-19 99.0 104 48.1
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 2.6e-19 99.0 104 46.2
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 4.4e-19 98.2 104 48.1
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 4.4e-19 98.2 104 46.2
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 7.5e-19 97.4 99 48.5
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 7.5e-19 97.4 104 44.2
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 7.5e-19 97.4 104 45.2
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 1.7e-18 96.3 101 46.5
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 2.8e-18 95.5 99 46.5
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.8e-18 95.5 105 45.7
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 3.7e-18 95.1 97 46.4
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 3.7e-18 95.1 96 45.8
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 2.4e-17 92.4 102 40.2
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 2.4e-17 92.4 104 44.2
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.4e-17 92.4 105 44.8
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 3.1e-17 92.0 94 48.9
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 3.1e-17 92.0 94 48.9
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 3.1e-17 92.0 94 50.0
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 3.1e-17 92.0 94 48.9
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 5.3e-17 91.3 99 50.5
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 9.1e-17 90.5 94 46.8
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 1.2e-16 90.1 94 41.5
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 1.6e-16 89.7 93 49.5
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 1.6e-16 89.7 94 47.9
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.6e-16 89.7 104 46.2
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 2.0e-16 89.4 104 43.3
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.7e-16 89.0 104 43.3
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 2.7e-16 89.0 100 41.0
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.5e-16 88.6 104 43.3
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 3.5e-16 88.6 93 45.2
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 3.5e-16 88.6 93 49.5
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 4.5e-16 88.2 104 43.3
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 5.9e-16 87.8 93 50.5
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 7.7e-16 87.4 94 45.7
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 7.7e-16 87.4 104 41.3
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 7.7e-16 87.4 102 40.2
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 7.7e-16 87.4 102 40.2
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 7.7e-16 87.4 102 40.2
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 1.7e-15 86.3 98 48.0
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 2.9e-15 85.5 104 43.3
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 3.8e-15 85.1 98 44.9
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 3.8e-15 85.1 97 47.4
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 5.0e-15 84.7 95 45.3
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 5.0e-15 84.7 93 44.1
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 6.5e-15 84.3 94 45.7
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 6.5e-15 84.3 91 48.4
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 8.5e-15 84.0 99 44.4
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 8.5e-15 84.0 104 42.3
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 1.1e-14 83.6 104 43.3
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 1.5e-14 83.2 104 43.3
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 1.5e-14 83.2 94 40.4
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 1.5e-14 83.2 97 45.4
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 1.9e-14 82.8 104 40.4
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 2.5e-14 82.4 97 45.4
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 2.5e-14 82.4 93 39.8
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 3.2e-14 82.0 97 45.4
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 4.2e-14 81.6 104 42.3
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 4.2e-14 81.6 90 44.4
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 5.5e-14 81.3 104 40.4
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 5.5e-14 81.3 104 40.4
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 5.5e-14 81.3 90 47.8
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 7.2e-14 80.9 87 46.0
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 1.2e-13 80.1 90 46.7
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 1.2e-13 80.1 90 46.7
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 3.6e-13 78.6 104 38.5
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 3.6e-13 78.6 104 39.4
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 1.0e-12 77.0 90 45.6
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 1.0e-12 77.0 90 45.6
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 1.0e-12 77.0 90 45.6
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 1.8e-12 76.3 89 40.4
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 2.3e-12 75.9 92 41.3
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 2.3e-12 75.9 119 37.0
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 2.0e-11 72.8 88 39.8
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 9.8e-11 70.5 104 37.5
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 1.3e-10 70.1 104 39.4
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 3.7e-10 68.6 104 39.4
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 4.1e-09 65.1 97 36.1
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 5.4e-09 64.7 64 46.9
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.6e-08 63.2 70 45.7
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.6e-08 63.2 70 45.7
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 1.7e-07 59.7 67 43.3
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 1.9e-06 56.2 85 36.5


User provided reference genes

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