Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 1.5e-121 439.5 217 100.0
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 1.0e-24 117.9 141 41.8
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 1.7e-24 117.1 144 41.7
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 2.9e-24 116.3 138 42.0
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 5.0e-24 115.5 138 41.3
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 1.4e-23 114.0 145 41.4
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 1.4e-23 114.0 141 41.8
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 4.2e-23 112.5 141 39.7
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 5.5e-23 112.1 138 43.5
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 5.5e-23 112.1 138 39.9
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 5.5e-23 112.1 141 41.1
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 7.2e-23 111.7 141 37.6
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 9.3e-23 111.3 138 42.0
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 1.6e-22 110.5 141 39.0
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 1.6e-22 110.5 141 43.3
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 1.6e-22 110.5 138 41.3
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 2.1e-22 110.2 138 41.3
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 2.7e-22 109.8 141 39.0
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 2.7e-22 109.8 141 42.6
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 3.6e-22 109.4 141 40.4
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.6e-22 109.4 141 40.4
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 3.6e-22 109.4 138 42.8
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 4.6e-22 109.0 141 39.7
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 4.6e-22 109.0 141 39.7
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 4.6e-22 109.0 138 38.4
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 6.1e-22 108.6 141 39.7
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 6.1e-22 108.6 141 39.7
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 7.9e-22 108.2 141 39.7
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 1.3e-21 107.5 141 40.4
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 1.3e-21 107.5 141 41.1
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 1.8e-21 107.1 141 40.4
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 3.9e-21 105.9 138 40.6
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 5.1e-21 105.5 141 42.6
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 5.1e-21 105.5 141 41.8
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 6.7e-21 105.1 141 39.7
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 6.7e-21 105.1 138 41.3
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 6.7e-21 105.1 141 40.4
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 6.7e-21 105.1 145 38.6
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 8.7e-21 104.8 136 38.2
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 8.7e-21 104.8 145 37.9
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 8.7e-21 104.8 141 39.0
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 1.1e-20 104.4 163 39.9
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.1e-20 104.4 141 41.8
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 1.1e-20 104.4 141 41.1
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.5e-20 104.0 141 41.1
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.5e-20 104.0 141 41.1
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 1.5e-20 104.0 138 39.9
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 1.9e-20 103.6 141 38.3
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.5e-20 103.2 141 41.8
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 5.7e-20 102.1 141 36.9
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 5.7e-20 102.1 141 37.6
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 9.7e-20 101.3 152 36.2
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 1.6e-19 100.5 138 37.7
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 1.6e-19 100.5 138 39.1
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.6e-19 100.5 141 39.0
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 2.2e-19 100.1 138 39.1
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 2.8e-19 99.8 138 37.7
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 4.8e-19 99.0 141 38.3
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 4.8e-19 99.0 141 36.9
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 4.8e-19 99.0 142 40.1
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 6.3e-19 98.6 138 38.4
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 8.2e-19 98.2 141 36.2
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 8.2e-19 98.2 146 38.4
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 8.2e-19 98.2 138 37.7
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 1.1e-18 97.8 138 37.7
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 1.1e-18 97.8 138 37.7
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 1.1e-18 97.8 138 36.2
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 1.4e-18 97.4 141 41.1
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 1.8e-18 97.1 143 39.2
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 2.4e-18 96.7 142 38.0
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 2.4e-18 96.7 141 37.6
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 3.1e-18 96.3 141 41.8
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 4.1e-18 95.9 146 38.4
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 4.1e-18 95.9 136 36.0
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 5.3e-18 95.5 173 35.3
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 6.9e-18 95.1 138 37.0
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 6.9e-18 95.1 171 33.9
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 9.1e-18 94.7 138 38.4
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 9.1e-18 94.7 138 40.6
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 1.5e-17 94.0 141 36.9
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 2.0e-17 93.6 142 36.6
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 2.6e-17 93.2 142 38.0
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 2.6e-17 93.2 141 33.3
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 4.5e-17 92.4 138 34.8
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 7.7e-17 91.7 145 38.6
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 7.7e-17 91.7 138 35.5
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 7.7e-17 91.7 146 36.3
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 7.7e-17 91.7 138 40.6
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 7.7e-17 91.7 138 34.8
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 1.0e-16 91.3 142 38.0
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 1.3e-16 90.9 138 34.8
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 2.9e-16 89.7 138 34.8
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 1.2e-14 84.3 153 35.9
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 2.1e-14 83.6 91 42.9
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 3.6e-14 82.8 142 33.1
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 6.7e-13 78.6 124 33.9
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 1.5e-12 77.4 148 34.5
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 7.4e-12 75.1 102 39.2
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 7.4e-12 75.1 154 35.1
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 2.2e-11 73.6 102 38.2
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 8.2e-11 71.6 97 39.2
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 4.1e-10 69.3 111 36.0
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 4.5e-09 65.9 71 40.8
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 2.9e-08 63.2 68 41.2


User provided reference genes

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