Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 2.3e-90 335.5 167 100.0
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 6.9e-34 147.9 149 52.3
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 4.5e-33 145.2 154 52.6
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 4.5e-33 145.2 138 55.8
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 1.7e-32 143.3 181 47.5
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 2.9e-32 142.5 159 50.3
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 3.8e-32 142.1 129 56.6
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 3.8e-32 142.1 149 52.3
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 5.0e-32 141.7 161 49.1
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 1.4e-31 140.2 151 53.0
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 1.9e-31 139.8 149 52.3
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 1.9e-31 139.8 154 51.3
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 1.9e-31 139.8 132 56.1
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 2.5e-31 139.4 151 51.7
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 2.5e-31 139.4 143 51.0
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 3.2e-31 139.0 148 50.0
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 3.2e-31 139.0 149 51.7
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 3.2e-31 139.0 149 51.7
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 3.2e-31 139.0 137 50.4
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 4.2e-31 138.7 142 50.0
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 5.5e-31 138.3 137 54.0
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 7.2e-31 137.9 149 50.3
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 7.2e-31 137.9 139 52.5
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 7.2e-31 137.9 146 50.0
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 9.4e-31 137.5 146 48.6
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 9.4e-31 137.5 157 49.0
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 1.6e-30 136.7 151 47.7
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 1.6e-30 136.7 123 58.5
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 2.1e-30 136.3 144 50.0
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 2.1e-30 136.3 161 46.6
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 2.1e-30 136.3 126 55.6
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 2.1e-30 136.3 126 56.3
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 2.1e-30 136.3 134 53.0
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 2.7e-30 136.0 149 51.0
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 4.7e-30 135.2 111 58.6
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 6.1e-30 134.8 146 48.6
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 6.1e-30 134.8 146 50.7
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 7.9e-30 134.4 148 50.0
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 7.9e-30 134.4 183 45.9
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 7.9e-30 134.4 145 52.4
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 1.0e-29 134.0 153 49.0
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 1.8e-29 133.3 118 55.9
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 2.3e-29 132.9 123 55.3
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 2.3e-29 132.9 123 55.3
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 3.0e-29 132.5 167 44.3
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 3.9e-29 132.1 150 53.3
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 5.1e-29 131.7 136 54.4
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 5.1e-29 131.7 123 54.5
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 6.7e-29 131.3 148 50.0
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 8.8e-29 131.0 168 48.2
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 1.5e-28 130.2 123 52.8
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 1.5e-28 130.2 99 63.6
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.5e-28 130.2 136 53.7
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.5e-28 130.2 136 53.7
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 1.5e-28 130.2 136 53.7
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 2.0e-28 129.8 148 51.4
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 3.3e-28 129.0 157 46.5
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 4.4e-28 128.6 164 43.9
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 4.4e-28 128.6 158 46.2
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 4.4e-28 128.6 99 59.6
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 4.4e-28 128.6 133 53.4
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 5.7e-28 128.3 134 51.5
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 5.7e-28 128.3 129 53.5
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 7.4e-28 127.9 98 61.2
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 7.4e-28 127.9 132 51.5
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 9.7e-28 127.5 133 54.1
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 1.7e-27 126.7 134 51.5
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 1.7e-27 126.7 134 51.5
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 2.8e-27 125.9 158 47.5
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 3.7e-27 125.6 121 52.9
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 3.7e-27 125.6 148 48.6
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 6.3e-27 124.8 148 49.3
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 6.3e-27 124.8 121 52.1
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 8.2e-27 124.4 121 52.9
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 1.1e-26 124.0 148 47.3
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 1.1e-26 124.0 167 46.1
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 1.4e-26 123.6 167 46.1
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 2.4e-26 122.9 153 47.1
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 4.1e-26 122.1 139 49.6
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 9.1e-26 120.9 179 44.1
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 1.2e-25 120.6 143 48.3
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 1.2e-25 120.6 141 48.9
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 1.2e-25 120.6 134 49.3
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 1.5e-25 120.2 116 54.3
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 1.5e-25 120.2 116 54.3
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 1.5e-25 120.2 116 54.3
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 2.0e-25 119.8 116 54.3
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 2.0e-25 119.8 116 54.3
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 2.0e-25 119.8 116 54.3
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 2.6e-25 119.4 141 48.2
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 2.6e-25 119.4 141 48.2
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 2.6e-25 119.4 140 49.3
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 2.6e-25 119.4 141 48.2
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 3.4e-25 119.0 146 45.9
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 4.5e-25 118.6 116 53.4
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 5.9e-25 118.2 138 50.0
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 7.7e-25 117.9 141 48.2
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 7.7e-25 117.9 141 48.2
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 1.7e-24 116.7 117 51.3
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 3.8e-24 115.5 113 52.2
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 1.7e-19 100.1 93 50.5
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 1.6e-17 93.6 119 43.7
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 1.0e-16 90.9 102 49.0
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 6.5e-16 88.2 134 44.0
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 1.1e-15 87.4 102 47.1
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 3.2e-15 85.9 120 39.2
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 1.0e-13 80.9 96 50.0
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 5.9e-09 65.1 85 41.2


User provided reference genes

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