Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 1.8e-94 349.4 192 100.0
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 9.4e-27 124.4 129 48.8
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 2.1e-26 123.2 104 56.7
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 2.7e-26 122.9 111 55.9
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.8e-25 120.2 140 47.1
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 1.8e-25 120.2 129 50.4
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 2.3e-25 119.8 145 42.1
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 2.3e-25 119.8 106 53.8
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 3.0e-25 119.4 117 53.0
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 4.0e-25 119.0 140 47.9
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 4.0e-25 119.0 146 45.2
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 5.2e-25 118.6 113 54.9
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 5.2e-25 118.6 133 47.4
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 6.8e-25 118.2 117 49.6
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 6.8e-25 118.2 105 54.3
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 8.8e-25 117.9 145 44.1
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 8.8e-25 117.9 126 46.8
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 8.8e-25 117.9 105 53.3
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 1.2e-24 117.5 126 50.0
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 1.2e-24 117.5 103 55.3
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 1.5e-24 117.1 154 41.6
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 1.5e-24 117.1 118 50.0
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 2.0e-24 116.7 117 49.6
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 2.0e-24 116.7 108 51.9
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 2.6e-24 116.3 140 45.7
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 3.4e-24 115.9 116 50.0
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 4.4e-24 115.5 83 66.3
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 4.4e-24 115.5 117 47.9
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 5.7e-24 115.2 94 54.3
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 5.7e-24 115.2 126 46.8
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 5.7e-24 115.2 123 48.0
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 5.7e-24 115.2 112 50.0
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 5.7e-24 115.2 132 47.7
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 7.5e-24 114.8 89 61.8
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 7.5e-24 114.8 93 60.2
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 9.8e-24 114.4 138 43.5
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 9.8e-24 114.4 125 51.2
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 9.8e-24 114.4 105 51.4
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 9.8e-24 114.4 105 51.4
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 9.8e-24 114.4 105 51.4
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 1.3e-23 114.0 122 50.0
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 1.3e-23 114.0 139 47.5
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.3e-23 114.0 119 47.9
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 1.7e-23 113.6 105 54.3
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.7e-23 113.6 138 43.5
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.7e-23 113.6 83 63.9
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 2.2e-23 113.2 139 43.2
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 2.2e-23 113.2 112 52.7
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 2.2e-23 113.2 118 47.5
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 2.2e-23 113.2 120 50.0
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 2.8e-23 112.8 123 49.6
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 2.8e-23 112.8 93 57.0
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 2.8e-23 112.8 111 51.4
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 3.7e-23 112.5 109 49.5
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 4.8e-23 112.1 111 49.5
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 4.8e-23 112.1 126 46.8
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 6.3e-23 111.7 108 50.9
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 6.3e-23 111.7 113 51.3
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 8.3e-23 111.3 98 55.1
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 8.3e-23 111.3 98 55.1
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 8.3e-23 111.3 140 45.7
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.1e-22 110.9 98 55.1
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.1e-22 110.9 98 55.1
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.1e-22 110.9 117 50.4
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.1e-22 110.9 117 50.4
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 1.4e-22 110.5 109 48.6
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.8e-22 110.2 106 50.0
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 2.4e-22 109.8 105 48.6
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 2.4e-22 109.8 106 50.0
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 3.1e-22 109.4 113 49.6
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 3.1e-22 109.4 113 49.6
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 3.1e-22 109.4 130 41.5
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 4.1e-22 109.0 103 52.4
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 5.4e-22 108.6 102 53.9
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 5.4e-22 108.6 126 45.2
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 5.4e-22 108.6 126 45.2
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 5.4e-22 108.6 106 49.1
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 7.0e-22 108.2 110 49.1
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 7.0e-22 108.2 110 50.0
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 1.2e-21 107.5 108 47.2
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.6e-21 107.1 84 58.3
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 1.6e-21 107.1 104 51.0
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 2.7e-21 106.3 104 53.8
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 2.7e-21 106.3 114 49.1
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 5.9e-21 105.1 121 44.6
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 1.7e-20 103.6 90 55.6
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 2.3e-20 103.2 82 57.3
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 2.3e-20 103.2 100 52.0
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 2.3e-20 103.2 99 53.5
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.1e-19 100.9 95 48.4
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 1.1e-19 100.9 104 49.0
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 3.3e-19 99.4 102 53.9
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.2e-18 97.4 107 50.5
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 2.1e-18 96.7 120 43.3
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 6.1e-18 95.1 85 56.5
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 1.0e-17 94.4 72 59.7
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 1.4e-17 94.0 91 51.6
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 3.0e-17 92.8 106 47.2
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 1.2e-16 90.9 118 41.5
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 5.7e-16 88.6 82 53.7
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 6.3e-15 85.1 72 52.8
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 1.8e-14 83.6 87 48.3
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 1.2e-10 70.9 61 49.2
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 2.9e-07 59.7 63 42.9


User provided reference genes

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