Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39038 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 8.1e-94 347.1 173 100.0
SEGI_19104 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 5.1e-72 274.6 139 97.1
ATR0736G170 Amborella trichopoda HOM05D002270 ORTHO05D002866 2.8e-30 136.0 151 48.3
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 1.8e-24 116.7 171 36.8
Mapoly0033s0024 Marchantia polymorpha HOM05D002270 ORTHO05D002866 3.0e-24 115.9 151 43.7
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 8.8e-24 114.4 169 39.1
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 1.1e-23 114.0 169 39.1
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 1.1e-23 114.0 171 35.7
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 3.3e-23 112.5 169 39.1
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 2.8e-22 109.4 149 40.3
COL.COLO4_12569 Corchorus olitorius HOM05D002270 ORTHO05D002866 3.7e-22 109.0 152 39.5
Pp3c8_22130 Physcomitrium patens HOM05D002270 ORTHO05D002866 3.7e-22 109.0 151 40.4
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 8.2e-22 107.8 150 37.3
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 8.2e-22 107.8 178 34.8
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 1.1e-21 107.5 152 36.8
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 1.4e-21 107.1 154 39.6
COL.COLO4_30723 Corchorus olitorius HOM05D002270 ORTHO05D002866 1.4e-21 107.1 152 38.8
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 1.4e-21 107.1 151 39.1
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 2.4e-21 106.3 152 38.2
TAR636G1163 Trochodendron aralioides HOM05D002270 ORTHO05D002866 3.1e-21 105.9 165 35.2
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 4.1e-21 105.5 157 36.9
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 5.3e-21 105.1 178 37.1
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 9.1e-21 104.4 178 34.8
arahy.Tifrunner.gnm1.ann1.VXKY2I Arachis hypogaea HOM05D002270 ORTHO05D002866 1.2e-20 104.0 157 36.3
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 1.6e-20 103.6 168 37.5
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 2.0e-20 103.2 163 36.8
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 3.5e-20 102.4 152 39.5
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 5.9e-20 101.7 165 32.1
Lsat_1_v5_gn_7_1960 Lactuca sativa HOM05D002270 ORTHO05D002866 7.7e-20 101.3 162 35.2
Lsat_1_v5_gn_7_1981 Lactuca sativa HOM05D002270 ORTHO05D002866 7.7e-20 101.3 162 35.8
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 1.0e-19 100.9 152 38.2
Os10g0456950 Oryza sativa ssp. japonica HOM05D002270 ORTHO05D002866 5.0e-19 98.6 154 39.6
QL01p053604 Quercus lobata HOM05D002270 ORTHO05D002866 6.5e-19 98.2 151 37.7
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 6.5e-19 98.2 171 33.9
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 1.5e-18 97.1 162 35.2
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 4.2e-18 95.5 152 36.8
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 4.2e-18 95.5 152 36.2
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 4.2e-18 95.5 153 35.3
Peaxi162Scf00226g00824 Petunia axillaris HOM05D002270 ORTHO05D002866 5.5e-18 95.1 163 33.7
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 9.4e-18 94.4 170 36.5
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 9.4e-18 94.4 154 37.7
Cpa.g.sc30.17 Carica papaya HOM05D002270 ORTHO05D002866 1.2e-17 94.0 159 35.2
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 1.2e-17 94.0 169 32.5
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 1.2e-17 94.0 165 37.0
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 1.2e-17 94.0 178 34.8
CDE12G0416 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 1.6e-17 93.6 148 33.8
Nitab4.5_0000433g0190 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.6e-17 93.6 162 34.6
Nitab4.5_0003025g0030 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.6e-17 93.6 162 34.6
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 2.1e-17 93.2 147 34.0
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 2.7e-17 92.8 168 35.7
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 3.6e-17 92.4 155 34.2
Solyc04g072270.1 Solanum lycopersicum HOM05D002270 ORTHO05D002866 3.6e-17 92.4 165 36.4
Ah.08g216540 Amaranthus hybridus HOM05D002270 ORTHO05D002866 4.7e-17 92.0 172 34.9
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 4.7e-17 92.0 162 32.7
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 4.7e-17 92.0 169 33.1
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 6.1e-17 91.7 169 31.4
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 6.1e-17 91.7 169 31.4
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 1.0e-16 90.9 162 34.0
ECA232G4141 Erigeron canadensis HOM05D002270 ORTHO05D002866 1.8e-16 90.1 177 31.1
Hund05751 Selenicereus undatus HOM05D002270 ORTHO05D002866 1.8e-16 90.1 177 33.9
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 3.0e-16 89.4 152 34.9
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 3.0e-16 89.4 154 37.0
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 4.0e-16 89.0 171 34.5
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 4.0e-16 89.0 160 33.1
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 4.0e-16 89.0 167 32.9
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 6.8e-16 88.2 166 32.5
Lalb_Chr20g0113881 Lupinus albus HOM05D002270 ORTHO05D002866 6.8e-16 88.2 163 28.2
QL93p0107_0362 Quercus lobata HOM05D002270 ORTHO05D002866 8.8e-16 87.8 139 36.0
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 3.4e-15 85.9 166 33.7
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 5.7e-15 85.1 152 31.6
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 7.5e-15 84.7 153 33.3
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 9.8e-15 84.3 151 32.5
TPR.G9777 Trifolium pratense HOM05D002270 ORTHO05D002866 9.8e-15 84.3 151 29.8
QL01p053642 Quercus lobata HOM05D002270 ORTHO05D002866 1.7e-14 83.6 117 39.3
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 2.2e-14 83.2 164 28.7
TPR.G29953 Trifolium pratense HOM05D002270 ORTHO05D002866 2.2e-14 83.2 150 30.0
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 2.8e-14 82.8 152 32.9
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.1e-13 80.9 136 33.8
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 1.4e-13 80.5 169 29.0
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 4.1e-13 79.0 152 29.6
Oeu047969.1 Olea europaea HOM05D002270 ORTHO05D002866 7.0e-13 78.2 158 29.7
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 1.2e-12 77.4 167 32.9
vmacro22219 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 1.2e-12 77.4 132 34.8
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 1.6e-12 77.0 193 27.5
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 2.7e-12 76.3 159 32.1
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 2.7e-12 76.3 167 31.1
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 4.5e-12 75.5 167 31.7
Sp5g22070 Schrenkiella parvula HOM05D002270 ORTHO05D002866 4.5e-12 75.5 167 32.9
SEGI_23610 Sequoiadendron giganteum HOM05D002270 ORTHO05D002866 4.5e-12 75.5 36 100.0
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 5.9e-12 75.1 159 32.7
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 5.9e-12 75.1 207 26.6
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 1.7e-11 73.6 159 31.4
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 6.5e-11 71.6 153 30.7
C05p38670 Brassica napus HOM05D002270 ORTHO05D002866 6.5e-11 71.6 153 30.7
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 8.5e-11 71.2 159 30.8
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 1.1e-10 70.9 127 37.0
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 3.2e-10 69.3 158 31.6
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 1.6e-09 67.0 134 31.3
CBR_g742 Chara braunii HOM05D002270 ORTHO05D002866 4.7e-09 65.5 166 31.9
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.8e-08 63.5 150 32.7
VMungo0464G1016 Vigna mungo HOM05D002270 ORTHO05D002866 1.8e-08 63.5 141 28.4
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 6.8e-08 61.6 96 33.3
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.5e-07 60.5 107 38.3
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 3.4e-07 59.3 42 64.3
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 9.8e-07 57.8 143 30.1


User provided reference genes

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