Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_39020 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 6.4e-118 427.9 310 100.0
SEGI_36083 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 4.1e-88 328.9 196 85.7
SEGI_17214 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 8.5e-86 321.2 196 84.2
SEGI_16110 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 7.0e-80 301.6 196 80.1
SEGI_14085 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 1.5e-77 293.9 196 79.6
SEGI_33454 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 3.5e-71 272.7 159 85.5
SEGI_22916 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 5.9e-55 218.8 205 60.5
SEGI_39801 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 7.6e-18 95.5 201 40.8
SEGI_30342 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 9.9e-18 95.1 201 39.8
SEGI_00399 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 3.5e-15 86.7 163 37.4
Actinidia26271 Actinidia chinensis HOM05D003328 ORTHO05D003722 8.7e-14 82.0 160 33.1
Lj4A124T57 Lonicera japonica HOM05D003328 ORTHO05D003722 1.1e-13 81.6 182 32.4
CSS0050346 Camellia sinensis var. sinensis HOM05D003328 ORTHO05D003722 1.9e-13 80.9 190 33.7
SEGI_28043 Sequoiadendron giganteum HOM05D003761 ORTHO05D004412 9.6e-13 78.6 131 32.8
Sopen02g034040 Solanum pennellii HOM05D003328 ORTHO05D003722 1.3e-12 78.2 174 32.8
vmacro18125 Vaccinium macrocarpon HOM05D003328 ORTHO05D003722 2.1e-12 77.4 190 34.2
CSS0002115 Camellia sinensis var. sinensis HOM05D003328 ORTHO05D003722 2.8e-12 77.0 202 33.7
CSS0026022 Camellia sinensis var. sinensis HOM05D003328 ORTHO05D003722 2.8e-12 77.0 202 33.7
Solyc02g089250.4 Solanum lycopersicum HOM05D003328 ORTHO05D003722 6.2e-12 75.9 174 32.2
CAN.G497.56 Capsicum annuum HOM05D003328 ORTHO05D003722 8.1e-12 75.5 202 31.2
Potri.017G100600 Populus trichocarpa HOM05D003328 ORTHO05D003722 8.1e-12 75.5 184 32.6
PGSC0003DMG400001380 Solanum tuberosum HOM05D003328 ORTHO05D003722 1.1e-11 75.1 197 29.4
Actinidia17606 Actinidia chinensis HOM05D003328 ORTHO05D003722 1.8e-11 74.3 164 31.1
Thecc.04G107000 Theobroma cacao HOM05D003328 ORTHO05D003722 2.4e-11 73.9 175 32.0
vmacro05612 Vaccinium macrocarpon HOM05D003328 ORTHO05D003722 2.4e-11 73.9 158 34.2
Rhsim08G0077700 Rhododendron simsii HOM05D003328 ORTHO05D003722 3.1e-11 73.6 189 30.7
Peaxi162Scf00020g02335 Petunia axillaris HOM05D003328 ORTHO05D003722 4.0e-11 73.2 175 32.6
Rhsim08G0077500 Rhododendron simsii HOM05D003328 ORTHO05D003722 5.3e-11 72.8 189 30.7
Sabra17G0086600 Salix brachista HOM05D003328 ORTHO05D003722 9.0e-11 72.0 194 35.6
Oeu062183.1 Olea europaea HOM05D003328 ORTHO05D003722 1.5e-10 71.2 190 30.5
Actinidia18081 Actinidia chinensis HOM05D003328 ORTHO05D003722 2.0e-10 70.9 181 29.8
CsaV3_5G038710 Cucumis sativus L. HOM05D003328 ORTHO05D003722 2.0e-10 70.9 192 30.7
Duzib138G1365 Durio zibethinus HOM05D003328 ORTHO05D003722 2.0e-10 70.9 145 35.9
Thecc.04G106800 Theobroma cacao HOM05D003328 ORTHO05D003722 2.0e-10 70.9 146 32.9
Sabra04G0071400 Salix brachista HOM05D003328 ORTHO05D003722 2.6e-10 70.5 171 32.7
MBI19_g00148_MAGBIO Magnolia biondii HOM05D003328 ORTHO05D003722 3.4e-10 70.1 200 30.5
QL02p065219 Quercus lobata HOM05D003328 ORTHO05D003722 3.4e-10 70.1 175 30.9
Aqoxy1G03531 Aquilegia oxysepala HOM05D003328 ORTHO05D003722 4.5e-10 69.7 148 35.1
DCAR_011012 Daucus carota HOM05D003328 ORTHO05D003722 4.5e-10 69.7 114 35.1
Hma1.2p1_1837F.1_g304780 Hydrangea macrophylla HOM05D003328 ORTHO05D003722 4.5e-10 69.7 173 30.1
COL.COLO4_19736 Corchorus olitorius HOM05D003328 ORTHO05D003722 5.8e-10 69.3 163 32.5
PGR042G0257 Punica granatum HOM05D003328 ORTHO05D003722 7.6e-10 68.9 193 29.5
Sed0000331 Sechium edule HOM05D003328 ORTHO05D003722 7.6e-10 68.9 153 33.3
TWI60G0197 Tripterygium wilfordii HOM05D003328 ORTHO05D003722 7.6e-10 68.9 157 34.4
ECA232G1221 Erigeron canadensis HOM05D003328 ORTHO05D003722 9.9e-10 68.6 156 34.0
Migut.K00883 Erythranthe guttata HOM05D003328 ORTHO05D003722 9.9e-10 68.6 152 33.6
MD09G1074600 Malus domestica HOM05D003328 ORTHO05D003722 9.9e-10 68.6 161 32.9
PSO782G2223 Papaver somniferum HOM05D003328 ORTHO05D003722 9.9e-10 68.6 158 30.4
Atru.chr8.639 Acer truncatum HOM05D003328 ORTHO05D003722 1.3e-09 68.2 171 31.0
TAR629G1921 Trochodendron aralioides HOM05D003328 ORTHO05D003722 1.3e-09 68.2 133 33.1
Dinv33868 Davidia involucrata HOM05D003328 ORTHO05D003722 1.7e-09 67.8 151 32.5
Duzib211G0567 Durio zibethinus HOM05D003328 ORTHO05D003722 1.7e-09 67.8 169 32.5
Nitab4.5_0001434g0120 Nicotiana tabacum HOM05D003328 ORTHO05D003722 1.7e-09 67.8 133 33.8
PGSC0003DMG400001028 Solanum tuberosum HOM05D003328 ORTHO05D003722 1.7e-09 67.8 186 30.1
Dinv34907 Davidia involucrata HOM05D003328 ORTHO05D003722 2.2e-09 67.4 190 31.1
Ciclev10012100m.g Citrus clementina HOM05D003328 ORTHO05D003722 2.9e-09 67.0 181 30.9
QL03p051089 Quercus lobata HOM05D003105 ORTHO05D003471 2.9e-09 67.0 172 28.5
SGA_v2.0_scaffold148G36453 Striga asiatica HOM05D003328 ORTHO05D003722 2.9e-09 67.0 160 29.4
Atru.chr8.633 Acer truncatum HOM05D003328 ORTHO05D003722 3.8e-09 66.6 156 32.1
Sc11g0000300 Simmondsia chinensis HOM05D003105 ORTHO05D003471 3.8e-09 66.6 133 29.3
Atru.chr11.2383 Acer truncatum HOM05D003105 ORTHO05D003471 4.9e-09 66.2 161 26.7
MELO3C022338.2 Cucumis melo HOM05D003105 ORTHO05D003471 4.9e-09 66.2 198 26.8
Gohir.A03G150400 Gossypium hirsutum HOM05D003105 ORTHO05D003471 4.9e-09 66.2 163 29.4
Potri.004G114300 Populus trichocarpa HOM05D003328 ORTHO05D003722 4.9e-09 66.2 184 30.4
Aa31LG11G13800 Aethionema arabicum HOM05D003328 ORTHO05D003722 6.4e-09 65.9 186 30.6
Cfa009403 Carpinus fangiana HOM05D003105 ORTHO05D003471 8.4e-09 65.5 159 28.3
HanXRQChr12g0385701 Helianthus annuus HOM05D003105 ORTHO05D003471 8.4e-09 65.5 133 28.6
TWI34G1159 Tripterygium wilfordii HOM05D003328 ORTHO05D003722 8.4e-09 65.5 141 32.6
CiPaw.05G105500 Carya illinoinensis HOM05D003105 ORTHO05D003471 1.1e-08 65.1 174 27.0
ECA234G0704 Erigeron canadensis HOM05D003105 ORTHO05D003471 1.1e-08 65.1 134 28.4
FAN09G3792 Fragaria x ananassa HOM05D003328 ORTHO05D003722 1.1e-08 65.1 143 33.6
Lsat_1_v5_gn_4_173421 Lactuca sativa HOM05D003328 ORTHO05D003722 1.4e-08 64.7 149 30.9
vmacro01039 Vaccinium macrocarpon HOM05D003105 ORTHO05D003471 1.4e-08 64.7 137 30.7
Atru.chr8.632 Acer truncatum HOM05D003328 ORTHO05D003722 1.9e-08 64.3 156 32.1
CiPaw.04G052000 Carya illinoinensis HOM05D003328 ORTHO05D003722 1.9e-08 64.3 159 31.4
AUR62028883 Chenopodium quinoa HOM05D003105 ORTHO05D003471 1.9e-08 64.3 159 27.0
Gohir.D02G173200 Gossypium hirsutum HOM05D003105 ORTHO05D003471 1.9e-08 64.3 163 28.8
Oeu031836.1 Olea europaea HOM05D003328 ORTHO05D003722 1.9e-08 64.3 156 31.4
Cc11_g17340 Coffea canephora HOM05D003105 ORTHO05D003471 2.4e-08 63.9 160 26.9
Lsat_1_v5_gn_4_2141 Lactuca sativa HOM05D003105 ORTHO05D003471 2.4e-08 63.9 145 26.9
CANSAT01G0148 Cannabis sativa HOM05D003105 ORTHO05D003471 3.2e-08 63.5 189 25.4
Sed0005495 Sechium edule HOM05D003328 ORTHO05D003722 3.2e-08 63.5 155 29.7
CANSAT64G0009 Cannabis sativa HOM05D003105 ORTHO05D003471 4.2e-08 63.2 139 27.3
COL.COLO4_19737 Corchorus olitorius HOM05D003328 ORTHO05D003722 4.2e-08 63.2 147 30.6
MELO3C022051.2 Cucumis melo HOM05D003328 ORTHO05D003722 4.2e-08 63.2 182 28.6
FAN05G0575 Fragaria x ananassa HOM05D003328 ORTHO05D003722 4.2e-08 63.2 143 32.9
Gorai.005G194900 Gossypium raimondii HOM05D003105 ORTHO05D003471 4.2e-08 63.2 163 28.8
Ah.16g101030 Amaranthus hybridus HOM05D003991 ORTHO05D004883 5.4e-08 62.8 143 30.1
Aqoxy3G03729 Aquilegia oxysepala HOM05D003328 ORTHO05D003722 5.4e-08 62.8 161 31.7
AUR62005672 Chenopodium quinoa HOM05D003105 ORTHO05D003471 7.1e-08 62.4 142 27.5
Prupe.3G309900 Prunus persica HOM05D003105 ORTHO05D003471 7.1e-08 62.4 133 27.1
HPP92_024462 Vanilla planifolia HOM05D003105 ORTHO05D003471 7.1e-08 62.4 175 27.4
RcHm_v2.0_Chr4g0429561 Rosa chinensis HOM05D003105 ORTHO05D003471 9.3e-08 62.0 130 27.7
ClCG06G001910 Citrullus lanatus HOM05D003105 ORTHO05D003471 1.2e-07 61.6 161 28.0
SEGI_16578 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 1.2e-07 61.6 169 32.5
VMungo0464G1663 Vigna mungo HOM05D003328 ORTHO05D003722 1.2e-07 61.6 177 31.1
Cc07_g04510 Coffea canephora HOM05D003328 ORTHO05D003722 1.6e-07 61.2 169 30.8
DCAR_025455 Daucus carota HOM05D003328 ORTHO05D003722 1.6e-07 61.2 183 28.4
Gohir.A07G179500 Gossypium hirsutum HOM05D003328 ORTHO05D003722 1.6e-07 61.2 161 31.1
Gorai.007G177000 Gossypium raimondii HOM05D003328 ORTHO05D003722 1.6e-07 61.2 136 33.1
Dinv03746 Davidia involucrata HOM05D003105 ORTHO05D003471 2.1e-07 60.8 166 27.7
MD16G1124400 Malus domestica HOM05D003105 ORTHO05D003471 2.1e-07 60.8 165 27.3
Sabra01G0043400 Salix brachista HOM05D003105 ORTHO05D003471 2.1e-07 60.8 164 27.4
HanXRQChr15g0464801 Helianthus annuus HOM05D003328 ORTHO05D003722 2.7e-07 60.5 144 30.6
MD17G1011000 Malus domestica HOM05D003105 ORTHO05D003471 2.7e-07 60.5 170 25.3
Nitab4.5_0000154g0140 Nicotiana tabacum HOM05D003328 ORTHO05D003722 2.7e-07 60.5 159 29.6
Prupe.1G221100 Prunus persica HOM05D003105 ORTHO05D003471 2.7e-07 60.5 161 23.0
TWI18G0471 Tripterygium wilfordii HOM05D003105 ORTHO05D003471 2.7e-07 60.5 156 26.3
CiPaw.03G082700 Carya illinoinensis HOM05D003328 ORTHO05D003722 3.5e-07 60.1 150 30.0
Eucgr.J01410 Eucalyptus grandis HOM05D003328 ORTHO05D003722 3.5e-07 60.1 151 30.5
Rhsim12G0022800 Rhododendron simsii HOM05D003105 ORTHO05D003471 3.5e-07 60.1 136 27.9
MSTRG.15433 Avicennia marina HOM05D003328 ORTHO05D003722 4.6e-07 59.7 154 29.2
Gohir.D11G166000 Gossypium hirsutum HOM05D003328 ORTHO05D003722 4.6e-07 59.7 136 32.4
AL6G26620 Arabidopsis lyrata HOM05D003328 ORTHO05D003722 6.0e-07 59.3 156 33.3
MD09G1075000 Malus domestica HOM05D003328 ORTHO05D003722 6.0e-07 59.3 138 31.2
SEGI_33280 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 6.0e-07 59.3 124 38.7
FAN09G0612 Fragaria x ananassa HOM05D003105 ORTHO05D003471 7.9e-07 58.9 152 24.3
Gohir.D07G186300 Gossypium hirsutum HOM05D003328 ORTHO05D003722 7.9e-07 58.9 138 31.9
HanXRQChr17g0551651 Helianthus annuus HOM05D003105 ORTHO05D003471 7.9e-07 58.9 131 26.7
Hund13673 Selenicereus undatus HOM05D003328 ORTHO05D003722 7.9e-07 58.9 166 30.7
Gorai.001G206900 Gossypium raimondii HOM05D003328 ORTHO05D003722 1.3e-06 58.2 138 31.9
FAN02G3189 Fragaria x ananassa HOM05D003105 ORTHO05D003471 1.8e-06 57.8 152 23.7
Glyma.13G051700 Glycine max HOM05D003328 ORTHO05D003722 1.8e-06 57.8 140 32.9
Glyma.19G035700 Glycine max HOM05D003328 ORTHO05D003722 1.8e-06 57.8 189 28.6
BcaC03g18449 Brassica carinata HOM05D003328 ORTHO05D003722 2.3e-06 57.4 182 31.3
BolC2t06720H Brassica oleracea HOM05D003328 ORTHO05D003722 2.3e-06 57.4 182 31.3
CARHR197550 Cardamine hirsuta HOM05D003328 ORTHO05D003722 2.3e-06 57.4 100 41.0
Thhalv10013771m.g Eutrema salsugineum HOM05D003328 ORTHO05D003722 2.3e-06 57.4 182 30.2
FAN05G3864 Fragaria x ananassa HOM05D003105 ORTHO05D003471 2.3e-06 57.4 152 23.7
FAN05G5186 Fragaria x ananassa HOM05D003105 ORTHO05D003471 2.3e-06 57.4 152 23.7
HanXRQChr14g0452501 Helianthus annuus HOM05D003328 ORTHO05D003722 2.3e-06 57.4 155 31.0
Hund25487 Selenicereus undatus HOM05D003105 ORTHO05D003471 2.3e-06 57.4 151 27.2
Actinidia30614 Actinidia chinensis HOM05D003105 ORTHO05D003471 3.0e-06 57.0 128 28.1
Carub.0006s1393 Capsella rubella HOM05D003328 ORTHO05D003722 3.0e-06 57.0 156 32.1
Potri.001G060500 Populus trichocarpa HOM05D003105 ORTHO05D003471 3.0e-06 57.0 164 27.4
SEGI_34452 Sequoiadendron giganteum HOM05D003328 ORTHO05D003722 3.0e-06 57.0 173 31.8
Eucgr.H03355 Eucalyptus grandis HOM05D003105 ORTHO05D003471 3.9e-06 56.6 136 25.7
Lsat_1_v5_gn_0_3380 Lactuca sativa HOM05D003105 ORTHO05D003471 3.9e-06 56.6 133 26.3
Lj1g0015821 Lotus japonicus HOM05D003105 ORTHO05D003471 5.1e-06 56.2 168 25.0
Manes.11G083400 Manihot esculenta HOM05D003105 ORTHO05D003471 5.1e-06 56.2 145 24.8
Potri.001G326200 Populus trichocarpa HOM05D003105 ORTHO05D003471 5.1e-06 56.2 159 25.2
PGSC0003DMG400020204 Solanum tuberosum HOM05D003105 ORTHO05D003471 5.1e-06 56.2 134 26.9
DCAR_025456 Daucus carota HOM05D003328 ORTHO05D003722 6.7e-06 55.8 191 29.3
Hma1.2p1_0525F.1_g172590 Hydrangea macrophylla HOM05D003105 ORTHO05D003471 6.7e-06 55.8 137 25.5
Sp6g28340 Schrenkiella parvula HOM05D003328 ORTHO05D003722 6.7e-06 55.8 155 29.7
TWI34G0266 Tripterygium wilfordii HOM05D003105 ORTHO05D003471 6.7e-06 55.8 155 25.2
TWI34G0640 Tripterygium wilfordii HOM05D003105 ORTHO05D003471 6.7e-06 55.8 155 25.2
BcaNung02204 Brassica carinata HOM05D003328 ORTHO05D003722 8.7e-06 55.5 136 32.4
CiPaw.03G058700 Carya illinoinensis HOM05D003105 ORTHO05D003471 8.7e-06 55.5 148 27.7
Glyma.16G053200 Glycine max HOM05D003105 ORTHO05D003471 8.7e-06 55.5 133 25.6
Psat3g169000 Pisum sativum HOM05D003105 ORTHO05D003471 8.7e-06 55.5 133 26.3
Potri.017G068400 Populus trichocarpa HOM05D003105 ORTHO05D003471 8.7e-06 55.5 133 25.6


User provided reference genes

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